data_8BW6 # _model_server_result.job_id T2bwBs6IzzJNjvVFQRhmSg _model_server_result.datetime_utc '2024-10-20 20:40:45' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8bw6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":102}' # _entry.id 8BW6 # _exptl.entry_id 8BW6 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 7 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8BW6 _cell.length_a 45.86 _cell.length_b 45.86 _cell.length_c 112.02 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8BW6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall 'P 4abw 2nw' _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N ? 2 G N N ? 2 H N N ? 2 I N N ? 2 J N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 84 A CYS 84 1_555 A SG CYS 84 A CYS 84 7_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.014 ? metalc ? metalc1 A OD1 ASP 60 A ASP 60 1_555 F CA CA . A CA 105 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.721 ? metalc ? metalc2 A OD2 ASP 60 A ASP 60 1_555 F CA CA . A CA 105 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.448 ? metalc ? metalc3 A OE2 GLU 62 A GLU 62 1_555 F CA CA . A CA 105 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.33 ? metalc ? metalc4 A OE1 GLU 62 A GLU 62 1_555 F CA CA . A CA 105 8_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.572 ? metalc ? metalc5 A OE2 GLU 62 A GLU 62 1_555 F CA CA . A CA 105 8_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.557 ? metalc ? metalc6 F CA CA . A CA 105 1_555 K O HOH . A HOH 223 8_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.356 ? metalc ? metalc7 F CA CA . A CA 105 1_555 K O HOH . A HOH 226 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.5 ? metalc ? metalc8 F CA CA . A CA 105 1_555 K O HOH . A HOH 229 8_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.821 ? # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 8BW6 _atom_sites.fract_transf_matrix[1][1] 0.021805 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.021805 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008927 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EDO A 1 101 101 EDO EDO . C 2 EDO A 1 102 102 EDO EDO . D 2 EDO A 1 103 201 EDO EDO . E 3 PEG A 1 104 1 PEG PEG . F 4 CA A 1 105 1 CA CA . G 2 EDO A 1 106 1 EDO EDO . H 2 EDO A 1 107 2 EDO EDO . I 2 EDO A 1 108 3 EDO EDO . J 2 EDO A 1 109 4 EDO EDO . K 5 HOH A 1 201 33 HOH HOH . K 5 HOH A 2 202 31 HOH HOH . K 5 HOH A 3 203 38 HOH HOH . K 5 HOH A 4 204 15 HOH HOH . K 5 HOH A 5 205 27 HOH HOH . K 5 HOH A 6 206 8 HOH HOH . K 5 HOH A 7 207 16 HOH HOH . K 5 HOH A 8 208 18 HOH HOH . K 5 HOH A 9 209 4 HOH HOH . K 5 HOH A 10 210 26 HOH HOH . K 5 HOH A 11 211 10 HOH HOH . K 5 HOH A 12 212 35 HOH HOH . K 5 HOH A 13 213 14 HOH HOH . K 5 HOH A 14 214 1 HOH HOH . K 5 HOH A 15 215 6 HOH HOH . K 5 HOH A 16 216 9 HOH HOH . K 5 HOH A 17 217 37 HOH HOH . K 5 HOH A 18 218 2 HOH HOH . K 5 HOH A 19 219 11 HOH HOH . K 5 HOH A 20 220 30 HOH HOH . K 5 HOH A 21 221 3 HOH HOH . K 5 HOH A 22 222 17 HOH HOH . K 5 HOH A 23 223 22 HOH HOH . K 5 HOH A 24 224 34 HOH HOH . K 5 HOH A 25 225 20 HOH HOH . K 5 HOH A 26 226 13 HOH HOH . K 5 HOH A 27 227 7 HOH HOH . K 5 HOH A 28 228 23 HOH HOH . K 5 HOH A 29 229 12 HOH HOH . K 5 HOH A 30 230 5 HOH HOH . K 5 HOH A 31 231 28 HOH HOH . K 5 HOH A 32 232 39 HOH HOH . K 5 HOH A 33 233 40 HOH HOH . K 5 HOH A 34 234 21 HOH HOH . K 5 HOH A 35 235 32 HOH HOH . K 5 HOH A 36 236 24 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . C 2 7.264 -9.321 17.657 1 66.32 ? C1 EDO 102 A 1 HETATM 2 O O1 EDO . . . C 2 6.323 -9.324 16.567 1 65.69 ? O1 EDO 102 A 1 HETATM 3 C C2 EDO . . . C 2 8.122 -8.053 17.634 1 66.53 ? C2 EDO 102 A 1 HETATM 4 O O2 EDO . . . C 2 8.694 -7.826 16.334 1 58.95 ? O2 EDO 102 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 287 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 4 #