data_8BW8 # _model_server_result.job_id TmvHd9BserBQeM8pdz_n5g _model_server_result.datetime_utc '2025-04-02 12:52:09' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8bw8 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"L","auth_seq_id":201}' # _entry.id 8BW8 # _exptl.entry_id 8BW8 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 3 _entity.src_method nat _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 9 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 8BW8 _cell.length_a 131.907 _cell.length_b 131.907 _cell.length_c 71.465 _cell.Z_PDB 9 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8BW8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 144 _symmetry.space_group_name_Hall 'P 31' _symmetry.space_group_name_H-M 'P 31' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 PISA dimeric 2 author_and_software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,G,H,I,P,Q 1 1 C,D,J,K,R,S 2 1 E,F,L,M,N,O,T,U 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 G N N ? 3 H N N ? 3 I N N ? 3 J N N ? 3 K N N ? 3 L N N ? 3 M N N ? 3 N N N ? 3 O N N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 129 n n C1 C2 GOL sing 130 n n C1 H11 GOL sing 131 n n C1 H12 GOL sing 132 n n O1 HO1 GOL sing 133 n n C2 O2 GOL sing 134 n n C2 C3 GOL sing 135 n n C2 H2 GOL sing 136 n n O2 HO2 GOL sing 137 n n C3 O3 GOL sing 138 n n C3 H31 GOL sing 139 n n C3 H32 GOL sing 140 n n O3 HO3 GOL sing 141 n n # _atom_sites.entry_id 8BW8 _atom_sites.fract_transf_matrix[1][1] 0.007581 _atom_sites.fract_transf_matrix[1][2] 0.004377 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008754 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013993 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 3 GOL A 1 201 6 GOL GOL . H 3 GOL B 1 401 2 GOL GOL . I 3 GOL B 1 402 7 GOL GOL . J 3 GOL C 1 201 3 GOL GOL . K 3 GOL D 1 401 8 GOL GOL . L 3 GOL E 1 201 4 GOL GOL . M 3 GOL E 1 202 9 GOL GOL . N 3 GOL F 1 401 1 GOL GOL . O 3 GOL F 1 402 5 GOL GOL . P 4 HOH A 1 301 295 HOH HOH . P 4 HOH A 2 302 198 HOH HOH . P 4 HOH A 3 303 144 HOH HOH . P 4 HOH A 4 304 236 HOH HOH . P 4 HOH A 5 305 111 HOH HOH . P 4 HOH A 6 306 48 HOH HOH . P 4 HOH A 7 307 30 HOH HOH . P 4 HOH A 8 308 17 HOH HOH . P 4 HOH A 9 309 249 HOH HOH . P 4 HOH A 10 310 56 HOH HOH . P 4 HOH A 11 311 10 HOH HOH . P 4 HOH A 12 312 47 HOH HOH . P 4 HOH A 13 313 96 HOH HOH . P 4 HOH A 14 314 213 HOH HOH . P 4 HOH A 15 315 22 HOH HOH . P 4 HOH A 16 316 23 HOH HOH . P 4 HOH A 17 317 4 HOH HOH . P 4 HOH A 18 318 92 HOH HOH . P 4 HOH A 19 319 147 HOH HOH . P 4 HOH A 20 320 38 HOH HOH . P 4 HOH A 21 321 187 HOH HOH . P 4 HOH A 22 322 101 HOH HOH . P 4 HOH A 23 323 163 HOH HOH . P 4 HOH A 24 324 72 HOH HOH . P 4 HOH A 25 325 19 HOH HOH . P 4 HOH A 26 326 125 HOH HOH . P 4 HOH A 27 327 66 HOH HOH . P 4 HOH A 28 328 102 HOH HOH . P 4 HOH A 29 329 235 HOH HOH . P 4 HOH A 30 330 137 HOH HOH . P 4 HOH A 31 331 140 HOH HOH . P 4 HOH A 32 332 228 HOH HOH . P 4 HOH A 33 333 159 HOH HOH . P 4 HOH A 34 334 284 HOH HOH . P 4 HOH A 35 335 303 HOH HOH . P 4 HOH A 36 336 297 HOH HOH . P 4 HOH A 37 337 281 HOH HOH . P 4 HOH A 38 338 173 HOH HOH . P 4 HOH A 39 339 255 HOH HOH . P 4 HOH A 40 340 254 HOH HOH . P 4 HOH A 41 341 126 HOH HOH . P 4 HOH A 42 342 248 HOH HOH . P 4 HOH A 43 343 252 HOH HOH . Q 4 HOH B 1 501 296 HOH HOH . Q 4 HOH B 2 502 43 HOH HOH . Q 4 HOH B 3 503 264 HOH HOH . Q 4 HOH B 4 504 194 HOH HOH . Q 4 HOH B 5 505 263 HOH HOH . Q 4 HOH B 6 506 21 HOH HOH . Q 4 HOH B 7 507 120 HOH HOH . Q 4 HOH B 8 508 74 HOH HOH . Q 4 HOH B 9 509 223 HOH HOH . Q 4 HOH B 10 510 64 HOH HOH . Q 4 HOH B 11 511 246 HOH HOH . Q 4 HOH B 12 512 63 HOH HOH . Q 4 HOH B 13 513 290 HOH HOH . Q 4 HOH B 14 514 218 HOH HOH . Q 4 HOH B 15 515 83 HOH HOH . Q 4 HOH B 16 516 91 HOH HOH . Q 4 HOH B 17 517 103 HOH HOH . Q 4 HOH B 18 518 146 HOH HOH . Q 4 HOH B 19 519 162 HOH HOH . Q 4 HOH B 20 520 150 HOH HOH . Q 4 HOH B 21 521 100 HOH HOH . Q 4 HOH B 22 522 145 HOH HOH . Q 4 HOH B 23 523 24 HOH HOH . Q 4 HOH B 24 524 226 HOH HOH . Q 4 HOH B 25 525 34 HOH HOH . Q 4 HOH B 26 526 128 HOH HOH . Q 4 HOH B 27 527 6 HOH HOH . Q 4 HOH B 28 528 8 HOH HOH . Q 4 HOH B 29 529 54 HOH HOH . Q 4 HOH B 30 530 1 HOH HOH . Q 4 HOH B 31 531 273 HOH HOH . Q 4 HOH B 32 532 28 HOH HOH . Q 4 HOH B 33 533 192 HOH HOH . Q 4 HOH B 34 534 36 HOH HOH . Q 4 HOH B 35 535 216 HOH HOH . Q 4 HOH B 36 536 71 HOH HOH . Q 4 HOH B 37 537 69 HOH HOH . Q 4 HOH B 38 538 98 HOH HOH . Q 4 HOH B 39 539 97 HOH HOH . Q 4 HOH B 40 540 130 HOH HOH . Q 4 HOH B 41 541 61 HOH HOH . Q 4 HOH B 42 542 82 HOH HOH . Q 4 HOH B 43 543 193 HOH HOH . Q 4 HOH B 44 544 68 HOH HOH . Q 4 HOH B 45 545 181 HOH HOH . Q 4 HOH B 46 546 32 HOH HOH . Q 4 HOH B 47 547 308 HOH HOH . Q 4 HOH B 48 548 227 HOH HOH . Q 4 HOH B 49 549 292 HOH HOH . Q 4 HOH B 50 550 208 HOH HOH . Q 4 HOH B 51 551 266 HOH HOH . Q 4 HOH B 52 552 237 HOH HOH . Q 4 HOH B 53 553 161 HOH HOH . Q 4 HOH B 54 554 14 HOH HOH . Q 4 HOH B 55 555 118 HOH HOH . Q 4 HOH B 56 556 244 HOH HOH . Q 4 HOH B 57 557 67 HOH HOH . Q 4 HOH B 58 558 148 HOH HOH . Q 4 HOH B 59 559 243 HOH HOH . Q 4 HOH B 60 560 182 HOH HOH . Q 4 HOH B 61 561 300 HOH HOH . Q 4 HOH B 62 562 106 HOH HOH . Q 4 HOH B 63 563 257 HOH HOH . Q 4 HOH B 64 564 288 HOH HOH . Q 4 HOH B 65 565 279 HOH HOH . Q 4 HOH B 66 566 247 HOH HOH . Q 4 HOH B 67 567 217 HOH HOH . Q 4 HOH B 68 568 307 HOH HOH . Q 4 HOH B 69 569 302 HOH HOH . Q 4 HOH B 70 570 306 HOH HOH . Q 4 HOH B 71 571 304 HOH HOH . Q 4 HOH B 72 572 119 HOH HOH . Q 4 HOH B 73 573 180 HOH HOH . Q 4 HOH B 74 574 259 HOH HOH . Q 4 HOH B 75 575 269 HOH HOH . Q 4 HOH B 76 576 238 HOH HOH . Q 4 HOH B 77 577 224 HOH HOH . R 4 HOH C 1 301 18 HOH HOH . R 4 HOH C 2 302 79 HOH HOH . R 4 HOH C 3 303 41 HOH HOH . R 4 HOH C 4 304 139 HOH HOH . R 4 HOH C 5 305 45 HOH HOH . R 4 HOH C 6 306 206 HOH HOH . R 4 HOH C 7 307 94 HOH HOH . R 4 HOH C 8 308 152 HOH HOH . R 4 HOH C 9 309 129 HOH HOH . R 4 HOH C 10 310 114 HOH HOH . R 4 HOH C 11 311 73 HOH HOH . R 4 HOH C 12 312 107 HOH HOH . R 4 HOH C 13 313 93 HOH HOH . R 4 HOH C 14 314 209 HOH HOH . R 4 HOH C 15 315 280 HOH HOH . R 4 HOH C 16 316 262 HOH HOH . R 4 HOH C 17 317 199 HOH HOH . S 4 HOH D 1 501 25 HOH HOH . S 4 HOH D 2 502 40 HOH HOH . S 4 HOH D 3 503 260 HOH HOH . S 4 HOH D 4 504 76 HOH HOH . S 4 HOH D 5 505 261 HOH HOH . S 4 HOH D 6 506 90 HOH HOH . S 4 HOH D 7 507 169 HOH HOH . S 4 HOH D 8 508 160 HOH HOH . S 4 HOH D 9 509 51 HOH HOH . S 4 HOH D 10 510 200 HOH HOH . S 4 HOH D 11 511 143 HOH HOH . S 4 HOH D 12 512 112 HOH HOH . S 4 HOH D 13 513 27 HOH HOH . S 4 HOH D 14 514 205 HOH HOH . S 4 HOH D 15 515 113 HOH HOH . S 4 HOH D 16 516 233 HOH HOH . S 4 HOH D 17 517 168 HOH HOH . S 4 HOH D 18 518 77 HOH HOH . S 4 HOH D 19 519 176 HOH HOH . S 4 HOH D 20 520 274 HOH HOH . S 4 HOH D 21 521 46 HOH HOH . S 4 HOH D 22 522 212 HOH HOH . S 4 HOH D 23 523 35 HOH HOH . S 4 HOH D 24 524 229 HOH HOH . S 4 HOH D 25 525 53 HOH HOH . S 4 HOH D 26 526 131 HOH HOH . S 4 HOH D 27 527 37 HOH HOH . S 4 HOH D 28 528 88 HOH HOH . S 4 HOH D 29 529 155 HOH HOH . S 4 HOH D 30 530 158 HOH HOH . S 4 HOH D 31 531 49 HOH HOH . S 4 HOH D 32 532 275 HOH HOH . S 4 HOH D 33 533 9 HOH HOH . S 4 HOH D 34 534 42 HOH HOH . S 4 HOH D 35 535 294 HOH HOH . S 4 HOH D 36 536 84 HOH HOH . S 4 HOH D 37 537 85 HOH HOH . S 4 HOH D 38 538 201 HOH HOH . S 4 HOH D 39 539 154 HOH HOH . S 4 HOH D 40 540 210 HOH HOH . S 4 HOH D 41 541 115 HOH HOH . S 4 HOH D 42 542 267 HOH HOH . S 4 HOH D 43 543 219 HOH HOH . S 4 HOH D 44 544 234 HOH HOH . S 4 HOH D 45 545 153 HOH HOH . S 4 HOH D 46 546 283 HOH HOH . S 4 HOH D 47 547 81 HOH HOH . S 4 HOH D 48 548 301 HOH HOH . S 4 HOH D 49 549 127 HOH HOH . S 4 HOH D 50 550 268 HOH HOH . S 4 HOH D 51 551 188 HOH HOH . S 4 HOH D 52 552 136 HOH HOH . T 4 HOH E 1 301 11 HOH HOH . T 4 HOH E 2 302 105 HOH HOH . T 4 HOH E 3 303 245 HOH HOH . T 4 HOH E 4 304 109 HOH HOH . T 4 HOH E 5 305 3 HOH HOH . T 4 HOH E 6 306 2 HOH HOH . T 4 HOH E 7 307 178 HOH HOH . T 4 HOH E 8 308 78 HOH HOH . T 4 HOH E 9 309 31 HOH HOH . T 4 HOH E 10 310 133 HOH HOH . T 4 HOH E 11 311 185 HOH HOH . T 4 HOH E 12 312 39 HOH HOH . T 4 HOH E 13 313 221 HOH HOH . T 4 HOH E 14 314 189 HOH HOH . T 4 HOH E 15 315 215 HOH HOH . T 4 HOH E 16 316 55 HOH HOH . T 4 HOH E 17 317 117 HOH HOH . T 4 HOH E 18 318 289 HOH HOH . T 4 HOH E 19 319 116 HOH HOH . T 4 HOH E 20 320 70 HOH HOH . T 4 HOH E 21 321 132 HOH HOH . T 4 HOH E 22 322 222 HOH HOH . T 4 HOH E 23 323 298 HOH HOH . T 4 HOH E 24 324 122 HOH HOH . T 4 HOH E 25 325 86 HOH HOH . T 4 HOH E 26 326 285 HOH HOH . T 4 HOH E 27 327 184 HOH HOH . T 4 HOH E 28 328 123 HOH HOH . T 4 HOH E 29 329 170 HOH HOH . U 4 HOH F 1 501 142 HOH HOH . U 4 HOH F 2 502 250 HOH HOH . U 4 HOH F 3 503 177 HOH HOH . U 4 HOH F 4 504 305 HOH HOH . U 4 HOH F 5 505 197 HOH HOH . U 4 HOH F 6 506 44 HOH HOH . U 4 HOH F 7 507 164 HOH HOH . U 4 HOH F 8 508 89 HOH HOH . U 4 HOH F 9 509 60 HOH HOH . U 4 HOH F 10 510 26 HOH HOH . U 4 HOH F 11 511 58 HOH HOH . U 4 HOH F 12 512 110 HOH HOH . U 4 HOH F 13 513 13 HOH HOH . U 4 HOH F 14 514 230 HOH HOH . U 4 HOH F 15 515 202 HOH HOH . U 4 HOH F 16 516 186 HOH HOH . U 4 HOH F 17 517 33 HOH HOH . U 4 HOH F 18 518 57 HOH HOH . U 4 HOH F 19 519 121 HOH HOH . U 4 HOH F 20 520 108 HOH HOH . U 4 HOH F 21 521 232 HOH HOH . U 4 HOH F 22 522 191 HOH HOH . U 4 HOH F 23 523 7 HOH HOH . U 4 HOH F 24 524 138 HOH HOH . U 4 HOH F 25 525 75 HOH HOH . U 4 HOH F 26 526 12 HOH HOH . U 4 HOH F 27 527 87 HOH HOH . U 4 HOH F 28 528 124 HOH HOH . U 4 HOH F 29 529 175 HOH HOH . U 4 HOH F 30 530 65 HOH HOH . U 4 HOH F 31 531 29 HOH HOH . U 4 HOH F 32 532 151 HOH HOH . U 4 HOH F 33 533 5 HOH HOH . U 4 HOH F 34 534 276 HOH HOH . U 4 HOH F 35 535 134 HOH HOH . U 4 HOH F 36 536 104 HOH HOH . U 4 HOH F 37 537 214 HOH HOH . U 4 HOH F 38 538 16 HOH HOH . U 4 HOH F 39 539 135 HOH HOH . U 4 HOH F 40 540 52 HOH HOH . U 4 HOH F 41 541 239 HOH HOH . U 4 HOH F 42 542 80 HOH HOH . U 4 HOH F 43 543 15 HOH HOH . U 4 HOH F 44 544 277 HOH HOH . U 4 HOH F 45 545 157 HOH HOH . U 4 HOH F 46 546 59 HOH HOH . U 4 HOH F 47 547 99 HOH HOH . U 4 HOH F 48 548 165 HOH HOH . U 4 HOH F 49 549 231 HOH HOH . U 4 HOH F 50 550 282 HOH HOH . U 4 HOH F 51 551 179 HOH HOH . U 4 HOH F 52 552 220 HOH HOH . U 4 HOH F 53 553 20 HOH HOH . U 4 HOH F 54 554 166 HOH HOH . U 4 HOH F 55 555 278 HOH HOH . U 4 HOH F 56 556 62 HOH HOH . U 4 HOH F 57 557 149 HOH HOH . U 4 HOH F 58 558 95 HOH HOH . U 4 HOH F 59 559 299 HOH HOH . U 4 HOH F 60 560 240 HOH HOH . U 4 HOH F 61 561 291 HOH HOH . U 4 HOH F 62 562 270 HOH HOH . U 4 HOH F 63 563 167 HOH HOH . U 4 HOH F 64 564 195 HOH HOH . U 4 HOH F 65 565 190 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . L 3 -8.317 34.603 75.224 1 91.85 ? C1 GOL 201 E 1 HETATM 2 O O1 GOL . . . L 3 -8.977 33.941 76.261 1 79.45 ? O1 GOL 201 E 1 HETATM 3 C C2 GOL . . . L 3 -6.802 34.475 75.5 1 96.15 ? C2 GOL 201 E 1 HETATM 4 O O2 GOL . . . L 3 -6.389 35.298 76.538 1 85.2 ? O2 GOL 201 E 1 HETATM 5 C C3 GOL . . . L 3 -6.586 32.978 75.816 1 73.55 ? C3 GOL 201 E 1 HETATM 6 O O3 GOL . . . L 3 -5.296 32.861 76.327 1 90.23 ? O3 GOL 201 E 1 # _model_server_stats.io_time_ms 31 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 312 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 6 #