data_8BWM # _model_server_result.job_id HRKKHrGbrhijXZSmaaSaNA _model_server_result.datetime_utc '2024-11-04 19:42:56' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8bwm # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":101}' # _entry.id 8BWM # _exptl.entry_id 8BWM _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8BWM _cell.length_a 57.48 _cell.length_b 89.263 _cell.length_c 97.782 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8BWM _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall 'P 2ac 2ab' _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 F N N ? 3 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 20 A CYS 400 1_555 A SG CYS 86 A CYS 466 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf2 A SG CYS 49 A CYS 429 1_555 A SG CYS 118 A CYS 498 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf3 A SG CYS 53 A CYS 433 1_555 A SG CYS 120 A CYS 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf4 A SG CYS 85 A CYS 465 1_555 B SG CYS 85 B CYS 465 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf5 B SG CYS 20 B CYS 400 1_555 B SG CYS 86 B CYS 466 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf6 B SG CYS 49 B CYS 429 1_555 B SG CYS 118 B CYS 498 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf7 B SG CYS 53 B CYS 433 1_555 B SG CYS 120 B CYS 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf8 C SG CYS 4 C CYS 26 1_555 C SG CYS 51 C CYS 73 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf9 C SG CYS 9 C CYS 31 1_555 C SG CYS 48 C CYS 70 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf10 C SG CYS 16 C CYS 38 1_555 C SG CYS 40 C CYS 62 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf11 C SG CYS 22 C CYS 44 1_555 C SG CYS 37 C CYS 59 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf12 C SG CYS 24 C CYS 46 1_555 C SG CYS 33 C CYS 55 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf13 C SG CYS 31 C CYS 53 1_555 C SG CYS 34 C CYS 56 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf14 C SG CYS 49 C CYS 71 1_555 C SG CYS 55 C CYS 77 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf15 D SG CYS 4 D CYS 26 1_555 D SG CYS 51 D CYS 73 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf16 D SG CYS 9 D CYS 31 1_555 D SG CYS 48 D CYS 70 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf17 D SG CYS 16 D CYS 38 1_555 D SG CYS 40 D CYS 62 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf18 D SG CYS 22 D CYS 44 1_555 D SG CYS 37 D CYS 59 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf19 D SG CYS 24 D CYS 46 1_555 D SG CYS 33 D CYS 55 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf20 D SG CYS 31 D CYS 53 1_555 D SG CYS 34 D CYS 56 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf21 D SG CYS 49 D CYS 71 1_555 D SG CYS 55 D CYS 77 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? metalc ? metalc1 A O GLY 33 A GLY 413 1_555 E CA CA . A CA 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.565 ? metalc ? metalc2 A OD2 ASP 36 A ASP 416 1_555 E CA CA . A CA 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.455 ? metalc ? metalc3 E CA CA . A CA 601 1_555 H O HOH . A HOH 712 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.65 ? metalc ? metalc4 E CA CA . A CA 601 1_555 H O HOH . A HOH 720 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.724 ? metalc ? metalc5 E CA CA . A CA 601 1_555 H O HOH . A HOH 728 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.597 ? metalc ? metalc6 E CA CA . A CA 601 1_555 J O HOH . C HOH 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.552 ? metalc ? metalc7 E CA CA . A CA 601 1_555 J O HOH . C HOH 103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.86 ? metalc ? metalc8 H O HOH . A HOH 725 4_545 F CA CA . B CA 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.822 ? metalc ? metalc9 B O GLY 33 B GLY 413 1_555 F CA CA . B CA 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.718 ? metalc ? metalc10 B OD2 ASP 36 B ASP 416 1_555 F CA CA . B CA 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.658 ? metalc ? metalc11 F CA CA . B CA 601 1_555 I O HOH . B HOH 723 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.769 ? metalc ? metalc12 F CA CA . B CA 601 1_555 K O HOH . D HOH 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.57 ? metalc ? metalc13 D O ALA 43 D ALA 65 1_555 G CA CA . D CA 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.677 ? metalc ? metalc14 D OE2 GLU 47 D GLU 69 1_555 G CA CA . D CA 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.734 ? metalc ? metalc15 G CA CA . D CA 101 1_555 K O HOH . D HOH 209 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.579 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 8BWM _atom_sites.fract_transf_matrix[1][1] 0.017397 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011203 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010227 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 CA A 1 601 1 CA CA . F 3 CA B 1 601 2 CA CA . G 3 CA D 1 101 3 CA CA . H 4 HOH A 1 701 47 HOH HOH . H 4 HOH A 2 702 66 HOH HOH . H 4 HOH A 3 703 23 HOH HOH . H 4 HOH A 4 704 42 HOH HOH . H 4 HOH A 5 705 1 HOH HOH . H 4 HOH A 6 706 17 HOH HOH . H 4 HOH A 7 707 27 HOH HOH . H 4 HOH A 8 708 22 HOH HOH . H 4 HOH A 9 709 20 HOH HOH . H 4 HOH A 10 710 86 HOH HOH . H 4 HOH A 11 711 32 HOH HOH . H 4 HOH A 12 712 147 HOH HOH . H 4 HOH A 13 713 88 HOH HOH . H 4 HOH A 14 714 26 HOH HOH . H 4 HOH A 15 715 21 HOH HOH . H 4 HOH A 16 716 65 HOH HOH . H 4 HOH A 17 717 31 HOH HOH . H 4 HOH A 18 718 121 HOH HOH . H 4 HOH A 19 719 55 HOH HOH . H 4 HOH A 20 720 127 HOH HOH . H 4 HOH A 21 721 37 HOH HOH . H 4 HOH A 22 722 8 HOH HOH . H 4 HOH A 23 723 106 HOH HOH . H 4 HOH A 24 724 87 HOH HOH . H 4 HOH A 25 725 148 HOH HOH . H 4 HOH A 26 726 134 HOH HOH . H 4 HOH A 27 727 128 HOH HOH . H 4 HOH A 28 728 140 HOH HOH . H 4 HOH A 29 729 117 HOH HOH . I 4 HOH B 1 701 156 HOH HOH . I 4 HOH B 2 702 40 HOH HOH . I 4 HOH B 3 703 5 HOH HOH . I 4 HOH B 4 704 150 HOH HOH . I 4 HOH B 5 705 13 HOH HOH . I 4 HOH B 6 706 96 HOH HOH . I 4 HOH B 7 707 2 HOH HOH . I 4 HOH B 8 708 63 HOH HOH . I 4 HOH B 9 709 49 HOH HOH . I 4 HOH B 10 710 30 HOH HOH . I 4 HOH B 11 711 97 HOH HOH . I 4 HOH B 12 712 18 HOH HOH . I 4 HOH B 13 713 4 HOH HOH . I 4 HOH B 14 714 155 HOH HOH . I 4 HOH B 15 715 41 HOH HOH . I 4 HOH B 16 716 77 HOH HOH . I 4 HOH B 17 717 93 HOH HOH . I 4 HOH B 18 718 46 HOH HOH . I 4 HOH B 19 719 6 HOH HOH . I 4 HOH B 20 720 73 HOH HOH . I 4 HOH B 21 721 99 HOH HOH . I 4 HOH B 22 722 33 HOH HOH . I 4 HOH B 23 723 131 HOH HOH . I 4 HOH B 24 724 154 HOH HOH . I 4 HOH B 25 725 25 HOH HOH . I 4 HOH B 26 726 118 HOH HOH . J 4 HOH C 1 101 104 HOH HOH . J 4 HOH C 2 102 137 HOH HOH . J 4 HOH C 3 103 126 HOH HOH . J 4 HOH C 4 104 103 HOH HOH . J 4 HOH C 5 105 61 HOH HOH . J 4 HOH C 6 106 43 HOH HOH . K 4 HOH D 1 201 51 HOH HOH . K 4 HOH D 2 202 29 HOH HOH . K 4 HOH D 3 203 14 HOH HOH . K 4 HOH D 4 204 151 HOH HOH . K 4 HOH D 5 205 109 HOH HOH . K 4 HOH D 6 206 146 HOH HOH . K 4 HOH D 7 207 45 HOH HOH . K 4 HOH D 8 208 111 HOH HOH . K 4 HOH D 9 209 144 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id G _atom_site.label_entity_id 3 _atom_site.Cartn_x -6.785 _atom_site.Cartn_y -18.484 _atom_site.Cartn_z -25.797 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 115.47 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 101 _atom_site.auth_asym_id D _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 80 _model_server_stats.parse_time_ms 33 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 293 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #