data_8BZI # _model_server_result.job_id RJwSJcd5ZVyzk9yI_sO7Wg _model_server_result.datetime_utc '2024-11-09 02:27:42' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8bzi # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":402}' # _entry.id 8BZI # _exptl.entry_id 8BZI _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 93.051 _cell.angle_gamma 90 _cell.entry_id 8BZI _cell.length_a 98.788 _cell.length_b 58.749 _cell.length_c 61.465 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8BZI _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall 'C 2y' _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 8BZI _atom_sites.fract_transf_matrix[1][1] 0.010123 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.00054 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017022 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016293 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SJL A 1 401 401 SJL M39 . C 3 EDO A 1 402 501 EDO EDO . D 3 EDO A 1 403 601 EDO EDO . E 3 EDO A 1 404 701 EDO EDO . F 4 HOH A 1 501 248 HOH HOH . F 4 HOH A 2 502 46 HOH HOH . F 4 HOH A 3 503 165 HOH HOH . F 4 HOH A 4 504 164 HOH HOH . F 4 HOH A 5 505 70 HOH HOH . F 4 HOH A 6 506 126 HOH HOH . F 4 HOH A 7 507 144 HOH HOH . F 4 HOH A 8 508 10 HOH HOH . F 4 HOH A 9 509 276 HOH HOH . F 4 HOH A 10 510 261 HOH HOH . F 4 HOH A 11 511 22 HOH HOH . F 4 HOH A 12 512 117 HOH HOH . F 4 HOH A 13 513 122 HOH HOH . F 4 HOH A 14 514 31 HOH HOH . F 4 HOH A 15 515 35 HOH HOH . F 4 HOH A 16 516 86 HOH HOH . F 4 HOH A 17 517 87 HOH HOH . F 4 HOH A 18 518 214 HOH HOH . F 4 HOH A 19 519 110 HOH HOH . F 4 HOH A 20 520 68 HOH HOH . F 4 HOH A 21 521 97 HOH HOH . F 4 HOH A 22 522 102 HOH HOH . F 4 HOH A 23 523 141 HOH HOH . F 4 HOH A 24 524 183 HOH HOH . F 4 HOH A 25 525 54 HOH HOH . F 4 HOH A 26 526 143 HOH HOH . F 4 HOH A 27 527 149 HOH HOH . F 4 HOH A 28 528 246 HOH HOH . F 4 HOH A 29 529 115 HOH HOH . F 4 HOH A 30 530 50 HOH HOH . F 4 HOH A 31 531 154 HOH HOH . F 4 HOH A 32 532 132 HOH HOH . F 4 HOH A 33 533 30 HOH HOH . F 4 HOH A 34 534 9 HOH HOH . F 4 HOH A 35 535 105 HOH HOH . F 4 HOH A 36 536 47 HOH HOH . F 4 HOH A 37 537 130 HOH HOH . F 4 HOH A 38 538 161 HOH HOH . F 4 HOH A 39 539 43 HOH HOH . F 4 HOH A 40 540 65 HOH HOH . F 4 HOH A 41 541 138 HOH HOH . F 4 HOH A 42 542 28 HOH HOH . F 4 HOH A 43 543 5 HOH HOH . F 4 HOH A 44 544 79 HOH HOH . F 4 HOH A 45 545 85 HOH HOH . F 4 HOH A 46 546 18 HOH HOH . F 4 HOH A 47 547 209 HOH HOH . F 4 HOH A 48 548 190 HOH HOH . F 4 HOH A 49 549 148 HOH HOH . F 4 HOH A 50 550 93 HOH HOH . F 4 HOH A 51 551 23 HOH HOH . F 4 HOH A 52 552 303 HOH HOH . F 4 HOH A 53 553 139 HOH HOH . F 4 HOH A 54 554 145 HOH HOH . F 4 HOH A 55 555 76 HOH HOH . F 4 HOH A 56 556 1 HOH HOH . F 4 HOH A 57 557 107 HOH HOH . F 4 HOH A 58 558 101 HOH HOH . F 4 HOH A 59 559 198 HOH HOH . F 4 HOH A 60 560 55 HOH HOH . F 4 HOH A 61 561 63 HOH HOH . F 4 HOH A 62 562 108 HOH HOH . F 4 HOH A 63 563 73 HOH HOH . F 4 HOH A 64 564 69 HOH HOH . F 4 HOH A 65 565 159 HOH HOH . F 4 HOH A 66 566 36 HOH HOH . F 4 HOH A 67 567 124 HOH HOH . F 4 HOH A 68 568 104 HOH HOH . F 4 HOH A 69 569 81 HOH HOH . F 4 HOH A 70 570 123 HOH HOH . F 4 HOH A 71 571 240 HOH HOH . F 4 HOH A 72 572 294 HOH HOH . F 4 HOH A 73 573 17 HOH HOH . F 4 HOH A 74 574 113 HOH HOH . F 4 HOH A 75 575 34 HOH HOH . F 4 HOH A 76 576 245 HOH HOH . F 4 HOH A 77 577 311 HOH HOH . F 4 HOH A 78 578 39 HOH HOH . F 4 HOH A 79 579 90 HOH HOH . F 4 HOH A 80 580 62 HOH HOH . F 4 HOH A 81 581 300 HOH HOH . F 4 HOH A 82 582 175 HOH HOH . F 4 HOH A 83 583 185 HOH HOH . F 4 HOH A 84 584 212 HOH HOH . F 4 HOH A 85 585 42 HOH HOH . F 4 HOH A 86 586 16 HOH HOH . F 4 HOH A 87 587 24 HOH HOH . F 4 HOH A 88 588 195 HOH HOH . F 4 HOH A 89 589 83 HOH HOH . F 4 HOH A 90 590 89 HOH HOH . F 4 HOH A 91 591 174 HOH HOH . F 4 HOH A 92 592 74 HOH HOH . F 4 HOH A 93 593 131 HOH HOH . F 4 HOH A 94 594 41 HOH HOH . F 4 HOH A 95 595 133 HOH HOH . F 4 HOH A 96 596 13 HOH HOH . F 4 HOH A 97 597 215 HOH HOH . F 4 HOH A 98 598 103 HOH HOH . F 4 HOH A 99 599 155 HOH HOH . F 4 HOH A 100 600 302 HOH HOH . F 4 HOH A 101 601 51 HOH HOH . F 4 HOH A 102 602 49 HOH HOH . F 4 HOH A 103 603 33 HOH HOH . F 4 HOH A 104 604 40 HOH HOH . F 4 HOH A 105 605 177 HOH HOH . F 4 HOH A 106 606 237 HOH HOH . F 4 HOH A 107 607 135 HOH HOH . F 4 HOH A 108 608 2 HOH HOH . F 4 HOH A 109 609 137 HOH HOH . F 4 HOH A 110 610 182 HOH HOH . F 4 HOH A 111 611 186 HOH HOH . F 4 HOH A 112 612 128 HOH HOH . F 4 HOH A 113 613 44 HOH HOH . F 4 HOH A 114 614 211 HOH HOH . F 4 HOH A 115 615 7 HOH HOH . F 4 HOH A 116 616 59 HOH HOH . F 4 HOH A 117 617 29 HOH HOH . F 4 HOH A 118 618 58 HOH HOH . F 4 HOH A 119 619 56 HOH HOH . F 4 HOH A 120 620 191 HOH HOH . F 4 HOH A 121 621 314 HOH HOH . F 4 HOH A 122 622 8 HOH HOH . F 4 HOH A 123 623 95 HOH HOH . F 4 HOH A 124 624 45 HOH HOH . F 4 HOH A 125 625 204 HOH HOH . F 4 HOH A 126 626 4 HOH HOH . F 4 HOH A 127 627 96 HOH HOH . F 4 HOH A 128 628 48 HOH HOH . F 4 HOH A 129 629 247 HOH HOH . F 4 HOH A 130 630 166 HOH HOH . F 4 HOH A 131 631 11 HOH HOH . F 4 HOH A 132 632 61 HOH HOH . F 4 HOH A 133 633 64 HOH HOH . F 4 HOH A 134 634 129 HOH HOH . F 4 HOH A 135 635 156 HOH HOH . F 4 HOH A 136 636 91 HOH HOH . F 4 HOH A 137 637 38 HOH HOH . F 4 HOH A 138 638 99 HOH HOH . F 4 HOH A 139 639 121 HOH HOH . F 4 HOH A 140 640 308 HOH HOH . F 4 HOH A 141 641 94 HOH HOH . F 4 HOH A 142 642 57 HOH HOH . F 4 HOH A 143 643 75 HOH HOH . F 4 HOH A 144 644 202 HOH HOH . F 4 HOH A 145 645 77 HOH HOH . F 4 HOH A 146 646 52 HOH HOH . F 4 HOH A 147 647 106 HOH HOH . F 4 HOH A 148 648 25 HOH HOH . F 4 HOH A 149 649 66 HOH HOH . F 4 HOH A 150 650 223 HOH HOH . F 4 HOH A 151 651 271 HOH HOH . F 4 HOH A 152 652 282 HOH HOH . F 4 HOH A 153 653 179 HOH HOH . F 4 HOH A 154 654 249 HOH HOH . F 4 HOH A 155 655 225 HOH HOH . F 4 HOH A 156 656 88 HOH HOH . F 4 HOH A 157 657 109 HOH HOH . F 4 HOH A 158 658 239 HOH HOH . F 4 HOH A 159 659 84 HOH HOH . F 4 HOH A 160 660 301 HOH HOH . F 4 HOH A 161 661 238 HOH HOH . F 4 HOH A 162 662 162 HOH HOH . F 4 HOH A 163 663 235 HOH HOH . F 4 HOH A 164 664 268 HOH HOH . F 4 HOH A 165 665 280 HOH HOH . F 4 HOH A 166 666 262 HOH HOH . F 4 HOH A 167 667 158 HOH HOH . F 4 HOH A 168 668 281 HOH HOH . F 4 HOH A 169 669 172 HOH HOH . F 4 HOH A 170 670 272 HOH HOH . F 4 HOH A 171 671 82 HOH HOH . F 4 HOH A 172 672 134 HOH HOH . F 4 HOH A 173 673 142 HOH HOH . F 4 HOH A 174 674 206 HOH HOH . F 4 HOH A 175 675 127 HOH HOH . F 4 HOH A 176 676 152 HOH HOH . F 4 HOH A 177 677 270 HOH HOH . F 4 HOH A 178 678 53 HOH HOH . F 4 HOH A 179 679 317 HOH HOH . F 4 HOH A 180 680 244 HOH HOH . F 4 HOH A 181 681 119 HOH HOH . F 4 HOH A 182 682 309 HOH HOH . F 4 HOH A 183 683 250 HOH HOH . F 4 HOH A 184 684 147 HOH HOH . F 4 HOH A 185 685 274 HOH HOH . F 4 HOH A 186 686 176 HOH HOH . F 4 HOH A 187 687 192 HOH HOH . F 4 HOH A 188 688 188 HOH HOH . F 4 HOH A 189 689 100 HOH HOH . F 4 HOH A 190 690 259 HOH HOH . F 4 HOH A 191 691 173 HOH HOH . F 4 HOH A 192 692 200 HOH HOH . F 4 HOH A 193 693 315 HOH HOH . F 4 HOH A 194 694 151 HOH HOH . F 4 HOH A 195 695 27 HOH HOH . F 4 HOH A 196 696 210 HOH HOH . F 4 HOH A 197 697 98 HOH HOH . F 4 HOH A 198 698 20 HOH HOH . F 4 HOH A 199 699 213 HOH HOH . F 4 HOH A 200 700 193 HOH HOH . F 4 HOH A 201 701 125 HOH HOH . F 4 HOH A 202 702 257 HOH HOH . F 4 HOH A 203 703 111 HOH HOH . F 4 HOH A 204 704 289 HOH HOH . F 4 HOH A 205 705 201 HOH HOH . F 4 HOH A 206 706 112 HOH HOH . F 4 HOH A 207 707 140 HOH HOH . F 4 HOH A 208 708 21 HOH HOH . F 4 HOH A 209 709 208 HOH HOH . F 4 HOH A 210 710 146 HOH HOH . F 4 HOH A 211 711 256 HOH HOH . F 4 HOH A 212 712 136 HOH HOH . F 4 HOH A 213 713 120 HOH HOH . F 4 HOH A 214 714 92 HOH HOH . F 4 HOH A 215 715 153 HOH HOH . F 4 HOH A 216 716 170 HOH HOH . F 4 HOH A 217 717 114 HOH HOH . F 4 HOH A 218 718 203 HOH HOH . F 4 HOH A 219 719 189 HOH HOH . F 4 HOH A 220 720 187 HOH HOH . F 4 HOH A 221 721 71 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . C 3 -36.953 -16.343 17.766 1 53.97 ? C1 EDO 402 A 1 HETATM 2 O O1 EDO . . . C 3 -38.017 -16.17 16.819 1 55.25 ? O1 EDO 402 A 1 HETATM 3 C C2 EDO . . . C 3 -37.488 -16.162 19.183 1 50.64 ? C2 EDO 402 A 1 HETATM 4 O O2 EDO . . . C 3 -38.603 -17.042 19.396 1 48.09 ? O2 EDO 402 A 1 # _model_server_stats.io_time_ms 0 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 20 _model_server_stats.query_time_ms 245 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 4 #