data_8BZJ
#
_model_server_result.job_id            oY9spwFbNvSivbh_xmRJWg 
_model_server_result.datetime_utc      '2025-01-10 11:38:01' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8bzj 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":401}' 
#
_entry.id    8BZJ 
#
_exptl.entry_id    8BZJ 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              448.948 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            8-(4-azanylbutyl)-6-[2-chloranyl-4-(6-methylpyridin-2-yl)phenyl]-2-(methylamino)pyrido[2,3-d]pyrimidin-7-one 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         88.855 
_cell.angle_beta          89.175 
_cell.angle_gamma         62.12 
_cell.entry_id            8BZJ 
_cell.length_a            55.049 
_cell.length_b            57.737 
_cell.length_c            61.771 
_cell.Z_PDB               2 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8BZJ 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    'P 1' 
_symmetry.space_group_name_H-M     'P 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,F 1 1 
B,D,E,G 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
#
_chem_comp.formula           'C24 H25 Cl N6 O' 
_chem_comp.formula_weight    448.948 
_chem_comp.id                SJX 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              8-(4-azanylbutyl)-6-[2-chloranyl-4-(6-methylpyridin-2-yl)phenyl]-2-(methylamino)pyrido[2,3-d]pyrimidin-7-one 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C15 C14 SJX sing 299 n n 
C13 C14 SJX doub 300 n y 
C13 C12 SJX sing 301 n y 
C14 N2 SJX sing 302 n y 
C12 C11 SJX doub 303 n y 
N2 C10 SJX doub 304 n y 
C11 C10 SJX sing 305 n y 
C10 C9 SJX sing 306 n n 
C9 C16 SJX doub 307 n y 
C9 C8 SJX sing 308 n y 
C16 C17 SJX sing 309 n y 
C8 C7 SJX doub 310 n y 
C17 CL SJX sing 311 n n 
C17 C6 SJX doub 312 n y 
C7 C6 SJX sing 313 n y 
C6 C5 SJX sing 314 n n 
O C18 SJX doub 315 n n 
C5 C18 SJX sing 316 n n 
C5 C4 SJX doub 317 n n 
C18 N3 SJX sing 318 n n 
N4 C22 SJX sing 319 n n 
C21 C22 SJX sing 320 n n 
C21 C20 SJX sing 321 n n 
C4 C3 SJX sing 322 n n 
N3 C19 SJX sing 323 n n 
N3 C23 SJX sing 324 n n 
C19 C20 SJX sing 325 n n 
C3 C23 SJX doub 326 n y 
C3 C2 SJX sing 327 n y 
C23 N5 SJX sing 328 n y 
C2 N1 SJX doub 329 n y 
N5 C1 SJX doub 330 n y 
C1 N1 SJX sing 331 n y 
C1 N SJX sing 332 n n 
N C SJX sing 333 n n 
N H1 SJX sing 334 n n 
C H2 SJX sing 335 n n 
C H3 SJX sing 336 n n 
C H4 SJX sing 337 n n 
C11 H5 SJX sing 338 n n 
C12 H6 SJX sing 339 n n 
C13 H7 SJX sing 340 n n 
C15 H8 SJX sing 341 n n 
C15 H9 SJX sing 342 n n 
C15 H10 SJX sing 343 n n 
C16 H11 SJX sing 344 n n 
C19 H12 SJX sing 345 n n 
C19 H13 SJX sing 346 n n 
C2 H14 SJX sing 347 n n 
C20 H15 SJX sing 348 n n 
C20 H16 SJX sing 349 n n 
C21 H17 SJX sing 350 n n 
C21 H18 SJX sing 351 n n 
C22 H19 SJX sing 352 n n 
C22 H20 SJX sing 353 n n 
C4 H21 SJX sing 354 n n 
C7 H22 SJX sing 355 n n 
C8 H23 SJX sing 356 n n 
N4 H24 SJX sing 357 n n 
N4 H25 SJX sing 358 n n 
#
_atom_sites.entry_id                     8BZJ 
_atom_sites.fract_transf_matrix[1][1]    0.018166 
_atom_sites.fract_transf_matrix[1][2]    -0.00961 
_atom_sites.fract_transf_matrix[1][3]    -0.000118 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.019594 
_atom_sites.fract_transf_matrix[2][3]    -0.000294 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.016192 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 SJX A 1 401 401 SJX MR5 . 
D 2 SJX B 1 401 401 SJX MR5 . 
E 3 EDO B 1 402 501 EDO EDO . 
F 4 HOH A 1 501 16 HOH HOH . 
F 4 HOH A 2 502 18 HOH HOH . 
F 4 HOH A 3 503 8 HOH HOH . 
F 4 HOH A 4 504 44 HOH HOH . 
F 4 HOH A 5 505 91 HOH HOH . 
F 4 HOH A 6 506 65 HOH HOH . 
F 4 HOH A 7 507 11 HOH HOH . 
F 4 HOH A 8 508 52 HOH HOH . 
F 4 HOH A 9 509 102 HOH HOH . 
F 4 HOH A 10 510 36 HOH HOH . 
F 4 HOH A 11 511 62 HOH HOH . 
F 4 HOH A 12 512 39 HOH HOH . 
F 4 HOH A 13 513 126 HOH HOH . 
F 4 HOH A 14 514 1 HOH HOH . 
F 4 HOH A 15 515 63 HOH HOH . 
F 4 HOH A 16 516 54 HOH HOH . 
F 4 HOH A 17 517 2 HOH HOH . 
F 4 HOH A 18 518 20 HOH HOH . 
F 4 HOH A 19 519 5 HOH HOH . 
F 4 HOH A 20 520 53 HOH HOH . 
F 4 HOH A 21 521 10 HOH HOH . 
F 4 HOH A 22 522 101 HOH HOH . 
F 4 HOH A 23 523 61 HOH HOH . 
F 4 HOH A 24 524 22 HOH HOH . 
F 4 HOH A 25 525 30 HOH HOH . 
F 4 HOH A 26 526 60 HOH HOH . 
F 4 HOH A 27 527 24 HOH HOH . 
F 4 HOH A 28 528 6 HOH HOH . 
F 4 HOH A 29 529 3 HOH HOH . 
F 4 HOH A 30 530 85 HOH HOH . 
F 4 HOH A 31 531 64 HOH HOH . 
F 4 HOH A 32 532 72 HOH HOH . 
F 4 HOH A 33 533 55 HOH HOH . 
F 4 HOH A 34 534 38 HOH HOH . 
F 4 HOH A 35 535 58 HOH HOH . 
F 4 HOH A 36 536 114 HOH HOH . 
F 4 HOH A 37 537 48 HOH HOH . 
F 4 HOH A 38 538 31 HOH HOH . 
F 4 HOH A 39 539 75 HOH HOH . 
F 4 HOH A 40 540 86 HOH HOH . 
F 4 HOH A 41 541 68 HOH HOH . 
F 4 HOH A 42 542 87 HOH HOH . 
F 4 HOH A 43 543 117 HOH HOH . 
F 4 HOH A 44 544 92 HOH HOH . 
G 4 HOH B 1 501 130 HOH HOH . 
G 4 HOH B 2 502 13 HOH HOH . 
G 4 HOH B 3 503 27 HOH HOH . 
G 4 HOH B 4 504 12 HOH HOH . 
G 4 HOH B 5 505 98 HOH HOH . 
G 4 HOH B 6 506 89 HOH HOH . 
G 4 HOH B 7 507 113 HOH HOH . 
G 4 HOH B 8 508 14 HOH HOH . 
G 4 HOH B 9 509 45 HOH HOH . 
G 4 HOH B 10 510 43 HOH HOH . 
G 4 HOH B 11 511 7 HOH HOH . 
G 4 HOH B 12 512 9 HOH HOH . 
G 4 HOH B 13 513 71 HOH HOH . 
G 4 HOH B 14 514 119 HOH HOH . 
G 4 HOH B 15 515 17 HOH HOH . 
G 4 HOH B 16 516 28 HOH HOH . 
G 4 HOH B 17 517 29 HOH HOH . 
G 4 HOH B 18 518 47 HOH HOH . 
G 4 HOH B 19 519 97 HOH HOH . 
G 4 HOH B 20 520 116 HOH HOH . 
G 4 HOH B 21 521 76 HOH HOH . 
G 4 HOH B 22 522 107 HOH HOH . 
G 4 HOH B 23 523 108 HOH HOH . 
G 4 HOH B 24 524 15 HOH HOH . 
G 4 HOH B 25 525 122 HOH HOH . 
G 4 HOH B 26 526 77 HOH HOH . 
G 4 HOH B 27 527 103 HOH HOH . 
G 4 HOH B 28 528 90 HOH HOH . 
G 4 HOH B 29 529 81 HOH HOH . 
G 4 HOH B 30 530 78 HOH HOH . 
G 4 HOH B 31 531 40 HOH HOH . 
G 4 HOH B 32 532 106 HOH HOH . 
G 4 HOH B 33 533 23 HOH HOH . 
G 4 HOH B 34 534 35 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N SJX . . . D 2 1.428 -30.716 42.758 1 52.43 ? N SJX 401 B 1 
HETATM 2 C C SJX . . . D 2 0.41 -31.744 42.759 1 49.63 ? C SJX 401 B 1 
HETATM 3 O O SJX . . . D 2 2.692 -31.769 49.401 1 57.04 ? O SJX 401 B 1 
HETATM 4 C C1 SJX . . . D 2 2.123 -30.367 43.849 1 54.85 ? C1 SJX 401 B 1 
HETATM 5 C C10 SJX . . . D 2 6.987 -29.382 53.298 1 58.96 ? C10 SJX 401 B 1 
HETATM 6 C C11 SJX . . . D 2 8.095 -28.553 53.419 1 57.66 ? C11 SJX 401 B 1 
HETATM 7 C C12 SJX . . . D 2 8.735 -28.48 54.642 1 63.21 ? C12 SJX 401 B 1 
HETATM 8 C C13 SJX . . . D 2 8.248 -29.215 55.705 1 60.1 ? C13 SJX 401 B 1 
HETATM 9 C C14 SJX . . . D 2 7.119 -30.011 55.517 1 61.58 ? C14 SJX 401 B 1 
HETATM 10 C C15 SJX . . . D 2 6.506 -30.785 56.647 1 62.95 ? C15 SJX 401 B 1 
HETATM 11 C C16 SJX . . . D 2 5.377 -28.567 51.57 1 59.69 ? C16 SJX 401 B 1 
HETATM 12 C C17 SJX . . . D 2 4.68 -28.738 50.388 1 62.87 ? C17 SJX 401 B 1 
HETATM 13 C C18 SJX . . . D 2 3.027 -31.162 48.397 1 54.4 ? C18 SJX 401 B 1 
HETATM 14 C C19 SJX . . . D 2 1.376 -32.508 47.244 1 56.13 ? C19 SJX 401 B 1 
HETATM 15 C C2 SJX . . . D 2 3.68 -29.013 44.81 1 53.17 ? C2 SJX 401 B 1 
HETATM 16 C C20 SJX . . . D 2 1.883 -33.812 46.668 1 51.63 ? C20 SJX 401 B 1 
HETATM 17 C C21 SJX . . . D 2 3.127 -34.292 47.37 1 51.26 ? C21 SJX 401 B 1 
HETATM 18 C C22 SJX . . . D 2 3.419 -35.742 47.065 1 52.21 ? C22 SJX 401 B 1 
HETATM 19 C C23 SJX . . . D 2 2.641 -30.767 46.025 1 55.96 ? C23 SJX 401 B 1 
HETATM 20 C C3 SJX . . . D 2 3.579 -29.713 46.018 1 54.72 ? C3 SJX 401 B 1 
HETATM 21 C C4 SJX . . . D 2 4.284 -29.437 47.227 1 47.7 ? C4 SJX 401 B 1 
HETATM 22 C C5 SJX . . . D 2 4.056 -30.123 48.369 1 53.44 ? C5 SJX 401 B 1 
HETATM 23 C C6 SJX . . . D 2 4.842 -29.882 49.606 1 59.7 ? C6 SJX 401 B 1 
HETATM 24 C C7 SJX . . . D 2 5.743 -30.852 50.045 1 56.11 ? C7 SJX 401 B 1 
HETATM 25 C C8 SJX . . . D 2 6.439 -30.684 51.227 1 55.53 ? C8 SJX 401 B 1 
HETATM 26 C C9 SJX . . . D 2 6.266 -29.545 52.01 1 58.59 ? C9 SJX 401 B 1 
HETATM 27 N N1 SJX . . . D 2 2.953 -29.314 43.729 1 47.98 ? N1 SJX 401 B 1 
HETATM 28 N N2 SJX . . . D 2 6.499 -30.102 54.327 1 57.62 ? N2 SJX 401 B 1 
HETATM 29 N N3 SJX . . . D 2 2.386 -31.445 47.208 1 58.43 ? N3 SJX 401 B 1 
HETATM 30 N N4 SJX . . . D 2 4.439 -36.272 47.96 1 57.51 ? N4 SJX 401 B 1 
HETATM 31 N N5 SJX . . . D 2 1.928 -31.116 44.949 1 55.03 ? N5 SJX 401 B 1 
HETATM 32 CL CL SJX . . . D 2 3.581 -27.481 49.907 1 59.28 ? CL SJX 401 B 1 
#
_model_server_stats.io_time_ms              97 
_model_server_stats.parse_time_ms           21 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           300 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           32 
#