data_8C1F # _model_server_result.job_id WRwnnKYeaSFUUOTnnuxrKw _model_server_result.datetime_utc '2024-11-28 07:32:25' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8c1f # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":403}' # _entry.id 8C1F # _exptl.entry_id 8C1F _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 8C1F _cell.length_a 81.44 _cell.length_b 81.44 _cell.length_c 172.01 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8C1F _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD2 ASP 151 A ASP 274 1_555 C MG MG . A MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.115 ? metalc ? metalc2 A OD1 ASP 151 A ASP 274 1_555 D MG MG . A MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.128 ? metalc ? metalc3 A OD2 ASP 151 A ASP 274 1_555 D MG MG . A MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.165 ? metalc ? metalc4 B O1B ADP . A ADP 401 1_555 C MG MG . A MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.105 ? metalc ? metalc5 B O1A ADP . A ADP 401 1_555 C MG MG . A MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.087 ? metalc ? metalc6 B O3B ADP . A ADP 401 1_555 D MG MG . A MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.935 ? metalc ? metalc7 C MG MG . A MG 402 1_555 S O HOH . A HOH 516 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? metalc ? metalc8 C MG MG . A MG 402 1_555 S O HOH . A HOH 540 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.127 ? metalc ? metalc9 D MG MG . A MG 403 1_555 J O2 T5L . A T5L 409 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.926 ? metalc ? metalc10 D MG MG . A MG 403 1_555 S O HOH . A HOH 515 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.999 ? metalc ? metalc11 D MG MG . A MG 403 1_555 S O HOH . A HOH 544 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.141 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 8C1F _atom_sites.fract_transf_matrix[1][1] 0.012279 _atom_sites.fract_transf_matrix[1][2] 0.007089 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014179 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005814 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ADP A 1 401 1 ADP ADP . C 3 MG A 1 402 1 MG MG . D 3 MG A 1 403 2 MG MG . E 4 GOL A 1 404 1 GOL GOL . F 4 GOL A 1 405 2 GOL GOL . G 4 GOL A 1 406 4 GOL GOL . H 4 GOL A 1 407 5 GOL GOL . I 4 GOL A 1 408 6 GOL GOL . J 5 T5L A 1 409 1 T5L CHA . K 6 SO4 A 1 410 1 SO4 SO4 . L 6 SO4 A 1 411 2 SO4 SO4 . M 6 SO4 A 1 412 3 SO4 SO4 . N 6 SO4 A 1 413 5 SO4 SO4 . O 6 SO4 A 1 414 6 SO4 SO4 . P 6 SO4 A 1 415 7 SO4 SO4 . Q 7 DMS A 1 416 2 DMS DMS . R 8 T2O A 1 417 4000 T2O 531 . S 9 HOH A 1 501 151 HOH HOH . S 9 HOH A 2 502 163 HOH HOH . S 9 HOH A 3 503 12 HOH HOH . S 9 HOH A 4 504 165 HOH HOH . S 9 HOH A 5 505 143 HOH HOH . S 9 HOH A 6 506 10 HOH HOH . S 9 HOH A 7 507 100 HOH HOH . S 9 HOH A 8 508 15 HOH HOH . S 9 HOH A 9 509 35 HOH HOH . S 9 HOH A 10 510 164 HOH HOH . S 9 HOH A 11 511 149 HOH HOH . S 9 HOH A 12 512 18 HOH HOH . S 9 HOH A 13 513 42 HOH HOH . S 9 HOH A 14 514 21 HOH HOH . S 9 HOH A 15 515 150 HOH HOH . S 9 HOH A 16 516 146 HOH HOH . S 9 HOH A 17 517 31 HOH HOH . S 9 HOH A 18 518 97 HOH HOH . S 9 HOH A 19 519 141 HOH HOH . S 9 HOH A 20 520 87 HOH HOH . S 9 HOH A 21 521 23 HOH HOH . S 9 HOH A 22 522 19 HOH HOH . S 9 HOH A 23 523 13 HOH HOH . S 9 HOH A 24 524 38 HOH HOH . S 9 HOH A 25 525 142 HOH HOH . S 9 HOH A 26 526 47 HOH HOH . S 9 HOH A 27 527 166 HOH HOH . S 9 HOH A 28 528 40 HOH HOH . S 9 HOH A 29 529 24 HOH HOH . S 9 HOH A 30 530 153 HOH HOH . S 9 HOH A 31 531 43 HOH HOH . S 9 HOH A 32 532 139 HOH HOH . S 9 HOH A 33 533 156 HOH HOH . S 9 HOH A 34 534 6 HOH HOH . S 9 HOH A 35 535 83 HOH HOH . S 9 HOH A 36 536 36 HOH HOH . S 9 HOH A 37 537 8 HOH HOH . S 9 HOH A 38 538 123 HOH HOH . S 9 HOH A 39 539 96 HOH HOH . S 9 HOH A 40 540 152 HOH HOH . S 9 HOH A 41 541 28 HOH HOH . S 9 HOH A 42 542 4 HOH HOH . S 9 HOH A 43 543 27 HOH HOH . S 9 HOH A 44 544 148 HOH HOH . S 9 HOH A 45 545 48 HOH HOH . S 9 HOH A 46 546 124 HOH HOH . S 9 HOH A 47 547 50 HOH HOH . S 9 HOH A 48 548 53 HOH HOH . S 9 HOH A 49 549 91 HOH HOH . S 9 HOH A 50 550 73 HOH HOH . S 9 HOH A 51 551 25 HOH HOH . S 9 HOH A 52 552 9 HOH HOH . S 9 HOH A 53 553 86 HOH HOH . S 9 HOH A 54 554 17 HOH HOH . S 9 HOH A 55 555 127 HOH HOH . S 9 HOH A 56 556 34 HOH HOH . S 9 HOH A 57 557 57 HOH HOH . S 9 HOH A 58 558 29 HOH HOH . S 9 HOH A 59 559 16 HOH HOH . S 9 HOH A 60 560 51 HOH HOH . S 9 HOH A 61 561 75 HOH HOH . S 9 HOH A 62 562 46 HOH HOH . S 9 HOH A 63 563 59 HOH HOH . S 9 HOH A 64 564 11 HOH HOH . S 9 HOH A 65 565 160 HOH HOH . S 9 HOH A 66 566 41 HOH HOH . S 9 HOH A 67 567 72 HOH HOH . S 9 HOH A 68 568 105 HOH HOH . S 9 HOH A 69 569 32 HOH HOH . S 9 HOH A 70 570 45 HOH HOH . S 9 HOH A 71 571 56 HOH HOH . S 9 HOH A 72 572 147 HOH HOH . S 9 HOH A 73 573 98 HOH HOH . S 9 HOH A 74 574 60 HOH HOH . S 9 HOH A 75 575 78 HOH HOH . S 9 HOH A 76 576 61 HOH HOH . S 9 HOH A 77 577 81 HOH HOH . S 9 HOH A 78 578 89 HOH HOH . S 9 HOH A 79 579 74 HOH HOH . S 9 HOH A 80 580 84 HOH HOH . S 9 HOH A 81 581 104 HOH HOH . S 9 HOH A 82 582 157 HOH HOH . S 9 HOH A 83 583 138 HOH HOH . S 9 HOH A 84 584 82 HOH HOH . S 9 HOH A 85 585 119 HOH HOH . S 9 HOH A 86 586 67 HOH HOH . S 9 HOH A 87 587 113 HOH HOH . S 9 HOH A 88 588 161 HOH HOH . S 9 HOH A 89 589 117 HOH HOH . S 9 HOH A 90 590 64 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 3 _atom_site.Cartn_x -13.001 _atom_site.Cartn_y -23.871 _atom_site.Cartn_z 6.174 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 35.15 _atom_site.pdbx_formal_charge 2 _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 403 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 298 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #