data_8C1S # _model_server_result.job_id pnxmvBxnx19NIWGjn9lqvA _model_server_result.datetime_utc '2024-11-23 10:03:52' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8c1s # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"V","auth_seq_id":1102}' # _entry.id 8C1S # _exptl.entry_id 8C1S _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 760.076 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8C1S _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 8C1S _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details octameric _pdbx_struct_assembly.oligomeric_count 8 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 M N N ? 5 R N N ? 5 S N N ? 5 V N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 E SG CYS 39 E CYS 40 1_555 E SG CYS 67 E CYS 68 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? disulf ? disulf2 E SG CYS 66 E CYS 67 1_555 E SG CYS 76 E CYS 77 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.06 ? disulf ? disulf3 F SG CYS 39 F CYS 40 1_555 F SG CYS 67 F CYS 68 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.054 ? disulf ? disulf4 F SG CYS 66 F CYS 67 1_555 F SG CYS 76 F CYS 77 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf5 G SG CYS 39 G CYS 40 1_555 G SG CYS 67 G CYS 68 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? disulf ? disulf6 G SG CYS 66 G CYS 67 1_555 G SG CYS 76 G CYS 77 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.065 ? disulf ? disulf7 H SG CYS 39 H CYS 40 1_555 H SG CYS 67 H CYS 68 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.019 ? disulf ? disulf8 H SG CYS 66 H CYS 67 1_555 H SG CYS 76 H CYS 77 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? # _chem_comp.formula 'C42 H82 N O8 P' _chem_comp.formula_weight 760.076 _chem_comp.id POV _chem_comp.mon_nstd_flag . _chem_comp.name '(2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms POPC # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N C12 POV sing 373 n n N C13 POV sing 374 n n N C14 POV sing 375 n n N C15 POV sing 376 n n P O11 POV sing 377 n n P O12 POV sing 378 n n P O13 POV sing 379 n n P O14 POV doub 380 n n C1 C2 POV sing 381 n n C1 O11 POV sing 382 n n C1 H1 POV sing 383 n n C1 H1A POV sing 384 n n C2 C3 POV sing 385 n n C2 O21 POV sing 386 n n C2 H2 POV sing 387 n n C3 O31 POV sing 388 n n C3 H3 POV sing 389 n n C3 H3A POV sing 390 n n C210 C211 POV sing 391 n n C210 C29 POV doub 392 z n C210 H210 POV sing 393 n n C310 C311 POV sing 394 n n C310 C39 POV sing 395 n n C310 H310 POV sing 396 n n C310 H31A POV sing 397 n n C11 C12 POV sing 398 n n C11 O12 POV sing 399 n n C11 H11 POV sing 400 n n C11 H11A POV sing 401 n n C211 C212 POV sing 402 n n C211 H211 POV sing 403 n n C211 H21A POV sing 404 n n C311 C312 POV sing 405 n n C311 H311 POV sing 406 n n C311 H31B POV sing 407 n n C12 H12 POV sing 408 n n C12 H12A POV sing 409 n n C212 C213 POV sing 410 n n C212 H212 POV sing 411 n n C212 H21B POV sing 412 n n C312 C313 POV sing 413 n n C312 H312 POV sing 414 n n C312 H31C POV sing 415 n n C13 H13 POV sing 416 n n C13 H13A POV sing 417 n n C13 H13B POV sing 418 n n C213 C214 POV sing 419 n n C213 H213 POV sing 420 n n C213 H21C POV sing 421 n n C313 C314 POV sing 422 n n C313 H313 POV sing 423 n n C313 H31D POV sing 424 n n C14 H14 POV sing 425 n n C14 H14A POV sing 426 n n C14 H14B POV sing 427 n n C214 C215 POV sing 428 n n C214 H214 POV sing 429 n n C214 H21D POV sing 430 n n C314 C315 POV sing 431 n n C314 H314 POV sing 432 n n C314 H31E POV sing 433 n n C15 H15 POV sing 434 n n C15 H15A POV sing 435 n n C15 H15B POV sing 436 n n C215 C216 POV sing 437 n n C215 H215 POV sing 438 n n C215 H21E POV sing 439 n n C315 C316 POV sing 440 n n C315 H315 POV sing 441 n n C315 H31F POV sing 442 n n C216 C217 POV sing 443 n n C216 H216 POV sing 444 n n C216 H21F POV sing 445 n n C316 H316 POV sing 446 n n C316 H31G POV sing 447 n n C316 H31H POV sing 448 n n C217 C218 POV sing 449 n n C217 H217 POV sing 450 n n C217 H21G POV sing 451 n n C218 H218 POV sing 452 n n C218 H21H POV sing 453 n n C218 H21J POV sing 454 n n C21 O21 POV sing 455 n n C21 C22 POV sing 456 n n C21 O22 POV doub 457 n n C22 C23 POV sing 458 n n C22 H22 POV sing 459 n n C22 H22A POV sing 460 n n C23 C24 POV sing 461 n n C23 H23 POV sing 462 n n C23 H23A POV sing 463 n n C24 C25 POV sing 464 n n C24 H24 POV sing 465 n n C24 H24A POV sing 466 n n C25 C26 POV sing 467 n n C25 H25 POV sing 468 n n C25 H25A POV sing 469 n n C26 C27 POV sing 470 n n C26 H26 POV sing 471 n n C26 H26A POV sing 472 n n C27 C28 POV sing 473 n n C27 H27 POV sing 474 n n C27 H27A POV sing 475 n n C28 C29 POV sing 476 n n C28 H28 POV sing 477 n n C28 H28A POV sing 478 n n C29 H29 POV sing 479 n n C31 O31 POV sing 480 n n C31 C32 POV sing 481 n n C31 O32 POV doub 482 n n C32 C33 POV sing 483 n n C32 H32 POV sing 484 n n C32 H32A POV sing 485 n n C33 C34 POV sing 486 n n C33 H33 POV sing 487 n n C33 H33A POV sing 488 n n C34 C35 POV sing 489 n n C34 H34 POV sing 490 n n C34 H34A POV sing 491 n n C35 C36 POV sing 492 n n C35 H35 POV sing 493 n n C35 H35A POV sing 494 n n C36 C37 POV sing 495 n n C36 H36 POV sing 496 n n C36 H36A POV sing 497 n n C37 C38 POV sing 498 n n C37 H37 POV sing 499 n n C37 H37A POV sing 500 n n C38 C39 POV sing 501 n n C38 H38 POV sing 502 n n C38 H38A POV sing 503 n n C39 H39 POV sing 504 n n C39 H39A POV sing 505 n n # _atom_sites.entry_id 8C1S _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code I 3 PLM A 1 1001 1001 PLM PLM . J 4 OLC A 1 1002 1101 OLC OLC . K 3 PLM B 1 1001 1001 PLM PLM . L 4 OLC B 1 1002 1201 OLC OLC . M 5 POV B 1 1003 1301 POV POV . N 4 OLC C 1 1001 1001 OLC OLC . O 3 PLM C 1 1002 1201 PLM PLM . P 4 OLC C 1 1003 1101 OLC OLC . Q 3 PLM D 1 1001 1001 PLM PLM . R 5 POV D 1 1002 1201 POV POV . S 5 POV E 1 1201 1201 POV POV . T 3 PLM F 1 1301 1301 PLM PLM . U 3 PLM G 1 1101 1101 PLM PLM . V 5 POV G 1 1102 1101 POV POV . W 6 HOH A 1 1101 2 HOH HOH . X 6 HOH B 1 1101 6 HOH HOH . Y 6 HOH C 1 1101 7 HOH HOH . Y 6 HOH C 2 1102 3 HOH HOH . Z 6 HOH D 1 1101 4 HOH HOH . Z 6 HOH D 2 1102 1 HOH HOH . AA 6 HOH F 1 1401 5 HOH HOH . BA 6 HOH G 1 1201 8 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N POV . . . V 5 183.714 157.869 199.68 1 216.07 ? N POV 1102 G 1 HETATM 2 P P POV . . . V 5 183.099 154.525 203.001 1 226.81 ? P POV 1102 G 1 HETATM 3 C C1 POV . . . V 5 181.122 156.099 203.836 1 143.05 ? C1 POV 1102 G 1 HETATM 4 C C2 POV . . . V 5 180.258 155.07 204.515 1 137.51 ? C2 POV 1102 G 1 HETATM 5 C C3 POV . . . V 5 179.26 154.503 203.549 1 155.78 ? C3 POV 1102 G 1 HETATM 6 C C210 POV . . . V 5 183.759 160.15 215.789 1 139.36 ? C210 POV 1102 G 1 HETATM 7 C C310 POV . . . V 5 176.378 155.015 212.473 1 140.35 ? C310 POV 1102 G 1 HETATM 8 C C11 POV . . . V 5 184.519 155.815 201.071 1 207.86 ? C11 POV 1102 G 1 HETATM 9 O O11 POV . . . V 5 181.768 155.41 202.738 1 152.69 ? O11 POV 1102 G 1 HETATM 10 C C211 POV . . . V 5 183.267 160.137 217.201 1 117.87 ? C211 POV 1102 G 1 HETATM 11 C C311 POV . . . V 5 175.505 154.586 213.644 1 142.6 ? C311 POV 1102 G 1 HETATM 12 C C12 POV . . . V 5 183.466 156.858 200.789 1 219.36 ? C12 POV 1102 G 1 HETATM 13 O O12 POV . . . V 5 184.397 155.318 202.442 1 200.36 ? O12 POV 1102 G 1 HETATM 14 C C212 POV . . . V 5 184.028 161.093 218.092 1 135.18 ? C212 POV 1102 G 1 HETATM 15 C C13 POV . . . V 5 184.292 159.113 200.26 1 193.35 ? C13 POV 1102 G 1 HETATM 16 O O13 POV . . . V 5 182.866 153.228 202.268 1 240.83 -1 O13 POV 1102 G 1 HETATM 17 C C213 POV . . . V 5 185.394 160.624 218.614 1 141.66 ? C213 POV 1102 G 1 HETATM 18 C C14 POV . . . V 5 184.635 157.369 198.6 1 227.48 ? C14 POV 1102 G 1 HETATM 19 O O14 POV . . . V 5 183.311 154.455 204.493 1 223.95 ? O14 POV 1102 G 1 HETATM 20 C C15 POV . . . V 5 182.398 158.195 199.056 1 196.85 ? C15 POV 1102 G 1 HETATM 21 C C21 POV . . . V 5 180.322 155.758 206.825 1 128.98 ? C21 POV 1102 G 1 HETATM 22 O O21 POV . . . V 5 179.589 155.629 205.687 1 123.8 ? O21 POV 1102 G 1 HETATM 23 C C22 POV . . . V 5 179.69 156.296 208.096 1 119.21 ? C22 POV 1102 G 1 HETATM 24 O O22 POV . . . V 5 181.502 155.49 206.824 1 146.83 ? O22 POV 1102 G 1 HETATM 25 C C23 POV . . . V 5 180.582 156.155 209.308 1 129.87 ? C23 POV 1102 G 1 HETATM 26 C C24 POV . . . V 5 180.065 156.842 210.558 1 118.73 ? C24 POV 1102 G 1 HETATM 27 C C25 POV . . . V 5 180.87 156.538 211.796 1 135.23 ? C25 POV 1102 G 1 HETATM 28 C C26 POV . . . V 5 181.435 157.753 212.49 1 138.38 ? C26 POV 1102 G 1 HETATM 29 C C27 POV . . . V 5 182.062 157.469 213.849 1 150.05 ? C27 POV 1102 G 1 HETATM 30 C C28 POV . . . V 5 182.049 158.608 214.831 1 142.24 ? C28 POV 1102 G 1 HETATM 31 C C29 POV . . . V 5 183.252 159.494 214.783 1 157.09 ? C29 POV 1102 G 1 HETATM 32 C C31 POV . . . V 5 177.414 155.207 202.294 1 152.49 ? C31 POV 1102 G 1 HETATM 33 O O31 POV . . . V 5 178.519 155.59 202.953 1 158.49 ? O31 POV 1102 G 1 HETATM 34 C C32 POV . . . V 5 176.14 155.849 202.78 1 133.26 ? C32 POV 1102 G 1 HETATM 35 O O32 POV . . . V 5 177.403 154.417 201.394 1 151.98 ? O32 POV 1102 G 1 HETATM 36 C C33 POV . . . V 5 175.38 154.943 203.738 1 141.99 ? C33 POV 1102 G 1 HETATM 37 C C34 POV . . . V 5 175.447 155.463 205.166 1 127.74 ? C34 POV 1102 G 1 HETATM 38 C C35 POV . . . V 5 175.12 154.515 206.293 1 120.23 ? C35 POV 1102 G 1 HETATM 39 C C36 POV . . . V 5 176.005 154.668 207.547 1 116.17 ? C36 POV 1102 G 1 HETATM 40 C C37 POV . . . V 5 175.321 155.134 208.814 1 124.73 ? C37 POV 1102 G 1 HETATM 41 C C38 POV . . . V 5 176.261 155.528 209.96 1 120.16 ? C38 POV 1102 G 1 HETATM 42 C C39 POV . . . V 5 175.605 155.598 211.316 1 119.88 ? C39 POV 1102 G 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 275 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 42 #