data_8C2H # _model_server_result.job_id kIyBWjic3iWsUaiV5wweew _model_server_result.datetime_utc '2024-11-04 23:12:45' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8c2h # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"M","auth_seq_id":1401}' # _entry.id 8C2H # _exptl.entry_id 8C2H _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 256.424 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PALMITIC ACID' _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8C2H _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 8C2H _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details octameric _pdbx_struct_assembly.oligomeric_count 8 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 I N N ? 3 K N N ? 3 M N N ? 3 O N N ? 3 R N N ? 3 T N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 E SG CYS 39 E CYS 40 1_555 E SG CYS 67 E CYS 68 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? disulf ? disulf2 E SG CYS 66 E CYS 67 1_555 E SG CYS 76 E CYS 77 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.054 ? disulf ? disulf3 F SG CYS 39 F CYS 40 1_555 F SG CYS 67 F CYS 68 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.019 ? disulf ? disulf4 F SG CYS 66 F CYS 67 1_555 F SG CYS 76 F CYS 77 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.049 ? disulf ? disulf5 G SG CYS 39 G CYS 40 1_555 G SG CYS 67 G CYS 68 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.016 ? disulf ? disulf6 G SG CYS 66 G CYS 67 1_555 G SG CYS 76 G CYS 77 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.058 ? disulf ? disulf7 H SG CYS 39 H CYS 40 1_555 H SG CYS 67 H CYS 68 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.013 ? disulf ? disulf8 H SG CYS 66 H CYS 67 1_555 H SG CYS 76 H CYS 77 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? # _chem_comp.formula 'C16 H32 O2' _chem_comp.formula_weight 256.424 _chem_comp.id PLM _chem_comp.mon_nstd_flag . _chem_comp.name 'PALMITIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PLM sing 324 n n C1 O2 PLM doub 325 n n C1 C2 PLM sing 326 n n O1 H PLM sing 327 n n C2 C3 PLM sing 328 n n C2 H21 PLM sing 329 n n C2 H22 PLM sing 330 n n C3 C4 PLM sing 331 n n C3 H31 PLM sing 332 n n C3 H32 PLM sing 333 n n C4 C5 PLM sing 334 n n C4 H41 PLM sing 335 n n C4 H42 PLM sing 336 n n C5 C6 PLM sing 337 n n C5 H51 PLM sing 338 n n C5 H52 PLM sing 339 n n C6 C7 PLM sing 340 n n C6 H61 PLM sing 341 n n C6 H62 PLM sing 342 n n C7 C8 PLM sing 343 n n C7 H71 PLM sing 344 n n C7 H72 PLM sing 345 n n C8 C9 PLM sing 346 n n C8 H81 PLM sing 347 n n C8 H82 PLM sing 348 n n C9 CA PLM sing 349 n n C9 H91 PLM sing 350 n n C9 H92 PLM sing 351 n n CA CB PLM sing 352 n n CA HA1 PLM sing 353 n n CA HA2 PLM sing 354 n n CB CC PLM sing 355 n n CB HB1 PLM sing 356 n n CB HB2 PLM sing 357 n n CC CD PLM sing 358 n n CC HC1 PLM sing 359 n n CC HC2 PLM sing 360 n n CD CE PLM sing 361 n n CD HD1 PLM sing 362 n n CD HD2 PLM sing 363 n n CE CF PLM sing 364 n n CE HE1 PLM sing 365 n n CE HE2 PLM sing 366 n n CF CG PLM sing 367 n n CF HF1 PLM sing 368 n n CF HF2 PLM sing 369 n n CG HG1 PLM sing 370 n n CG HG2 PLM sing 371 n n CG HG3 PLM sing 372 n n # _atom_sites.entry_id 8C2H _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code I 3 PLM A 1 1401 1401 PLM PLM . J 4 OLC A 1 1402 1402 OLC OLC . K 3 PLM B 1 1401 1401 PLM PLM . L 4 OLC B 1 1402 1402 OLC OLC . M 3 PLM C 1 1401 1401 PLM PLM . N 4 OLC C 1 1402 1402 OLC OLC . O 3 PLM D 1 1401 1401 PLM PLM . P 4 OLC D 1 1402 1402 OLC OLC . Q 5 POV E 1 401 401 POV POV . R 3 PLM F 1 1601 1601 PLM PLM . S 5 POV G 1 401 401 POV POV . T 3 PLM H 1 1601 1601 PLM PLM . U 6 HOH A 1 1501 1503 HOH HOH . U 6 HOH A 2 1502 1501 HOH HOH . U 6 HOH A 3 1503 1502 HOH HOH . U 6 HOH A 4 1504 1504 HOH HOH . U 6 HOH A 5 1505 1505 HOH HOH . U 6 HOH A 6 1506 1507 HOH HOH . U 6 HOH A 7 1507 1506 HOH HOH . U 6 HOH A 8 1508 1508 HOH HOH . U 6 HOH A 9 1509 1509 HOH HOH . U 6 HOH A 10 1510 1510 HOH HOH . V 6 HOH B 1 1501 1501 HOH HOH . V 6 HOH B 2 1502 1505 HOH HOH . V 6 HOH B 3 1503 1502 HOH HOH . V 6 HOH B 4 1504 1503 HOH HOH . V 6 HOH B 5 1505 1507 HOH HOH . V 6 HOH B 6 1506 1506 HOH HOH . V 6 HOH B 7 1507 1508 HOH HOH . V 6 HOH B 8 1508 1509 HOH HOH . V 6 HOH B 9 1509 1510 HOH HOH . V 6 HOH B 10 1510 1511 HOH HOH . V 6 HOH B 11 1511 1512 HOH HOH . V 6 HOH B 12 1512 1513 HOH HOH . V 6 HOH B 13 1513 1504 HOH HOH . V 6 HOH B 14 1514 1514 HOH HOH . V 6 HOH B 15 1515 1515 HOH HOH . V 6 HOH B 16 1516 1516 HOH HOH . V 6 HOH B 17 1517 1517 HOH HOH . V 6 HOH B 18 1518 1518 HOH HOH . V 6 HOH B 19 1519 1519 HOH HOH . V 6 HOH B 20 1520 1520 HOH HOH . W 6 HOH C 1 1501 1501 HOH HOH . W 6 HOH C 2 1502 1504 HOH HOH . W 6 HOH C 3 1503 1502 HOH HOH . W 6 HOH C 4 1504 1512 HOH HOH . W 6 HOH C 5 1505 1503 HOH HOH . W 6 HOH C 6 1506 1506 HOH HOH . W 6 HOH C 7 1507 1505 HOH HOH . W 6 HOH C 8 1508 1507 HOH HOH . W 6 HOH C 9 1509 1508 HOH HOH . W 6 HOH C 10 1510 1509 HOH HOH . W 6 HOH C 11 1511 1510 HOH HOH . W 6 HOH C 12 1512 1511 HOH HOH . W 6 HOH C 13 1513 1514 HOH HOH . W 6 HOH C 14 1514 1513 HOH HOH . X 6 HOH D 1 1501 1502 HOH HOH . X 6 HOH D 2 1502 1501 HOH HOH . X 6 HOH D 3 1503 1503 HOH HOH . X 6 HOH D 4 1504 1504 HOH HOH . X 6 HOH D 5 1505 1506 HOH HOH . X 6 HOH D 6 1506 1505 HOH HOH . X 6 HOH D 7 1507 1507 HOH HOH . X 6 HOH D 8 1508 1508 HOH HOH . X 6 HOH D 9 1509 1509 HOH HOH . X 6 HOH D 10 1510 1510 HOH HOH . X 6 HOH D 11 1511 1511 HOH HOH . X 6 HOH D 12 1512 1512 HOH HOH . X 6 HOH D 13 1513 1513 HOH HOH . X 6 HOH D 14 1514 1514 HOH HOH . X 6 HOH D 15 1515 1515 HOH HOH . X 6 HOH D 16 1516 1516 HOH HOH . X 6 HOH D 17 1517 1517 HOH HOH . X 6 HOH D 18 1518 1518 HOH HOH . X 6 HOH D 19 1519 1519 HOH HOH . X 6 HOH D 20 1520 1520 HOH HOH . X 6 HOH D 21 1521 1521 HOH HOH . Y 6 HOH E 1 501 501 HOH HOH . Y 6 HOH E 2 502 502 HOH HOH . Y 6 HOH E 3 503 503 HOH HOH . Y 6 HOH E 4 504 504 HOH HOH . Z 6 HOH F 1 1701 1701 HOH HOH . Z 6 HOH F 2 1702 1702 HOH HOH . Z 6 HOH F 3 1703 1703 HOH HOH . Z 6 HOH F 4 1704 1704 HOH HOH . Z 6 HOH F 5 1705 1705 HOH HOH . Z 6 HOH F 6 1706 1706 HOH HOH . AA 6 HOH G 1 501 501 HOH HOH . AA 6 HOH G 2 502 502 HOH HOH . AA 6 HOH G 3 503 503 HOH HOH . AA 6 HOH G 4 504 504 HOH HOH . BA 6 HOH H 1 1701 1701 HOH HOH . BA 6 HOH H 2 1702 1702 HOH HOH . BA 6 HOH H 3 1703 1703 HOH HOH . BA 6 HOH H 4 1704 1704 HOH HOH . BA 6 HOH H 5 1705 1705 HOH HOH . BA 6 HOH H 6 1706 1706 HOH HOH . BA 6 HOH H 7 1707 1707 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PLM . . . M 3 163.894 192.63 197.456 1 101.39 ? C1 PLM 1401 C 1 HETATM 2 O O1 PLM . . . M 3 162.84 192.899 198.098 1 98.3 ? O1 PLM 1401 C 1 HETATM 3 O O2 PLM . . . M 3 164.048 192.875 196.224 1 86.6 ? O2 PLM 1401 C 1 HETATM 4 C C2 PLM . . . M 3 165.06 191.999 198.209 1 86.42 ? C2 PLM 1401 C 1 HETATM 5 C C3 PLM . . . M 3 164.713 191.189 199.433 1 78.27 ? C3 PLM 1401 C 1 HETATM 6 C C4 PLM . . . M 3 165.757 190.128 199.742 1 81.98 ? C4 PLM 1401 C 1 HETATM 7 C C5 PLM . . . M 3 165.581 189.425 201.078 1 79.24 ? C5 PLM 1401 C 1 HETATM 8 C C6 PLM . . . M 3 165.718 187.916 201.029 1 83.63 ? C6 PLM 1401 C 1 HETATM 9 C C7 PLM . . . M 3 166.39 187.28 202.239 1 85.65 ? C7 PLM 1401 C 1 HETATM 10 C C8 PLM . . . M 3 165.585 187.329 203.525 1 95.03 ? C8 PLM 1401 C 1 HETATM 11 C C9 PLM . . . M 3 164.654 186.161 203.722 1 90.42 ? C9 PLM 1401 C 1 HETATM 12 C CA PLM . . . M 3 163.886 186.156 205.028 1 80.63 ? CA PLM 1401 C 1 HETATM 13 C CB PLM . . . M 3 163.398 184.772 205.451 1 67.83 ? CB PLM 1401 C 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 31 _model_server_stats.query_time_ms 274 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 13 #