data_8C2Z # _model_server_result.job_id W1e1Dz22aQVqGQywnYndmw _model_server_result.datetime_utc '2024-11-05 04:01:38' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8c2z # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":504}' # _entry.id 8C2Z # _exptl.entry_id 8C2Z _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 54.938 _entity.id 3 _entity.src_method nat _entity.type non-polymer _entity.pdbx_description 'MANGANESE (II) ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8C2Z _cell.length_a 115.896 _cell.length_b 121.509 _cell.length_c 54.021 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8C2Z _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall 'C 2c 2' _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C GLN 196 A GLN 272 1_555 A N PTR 197 A PTR 273 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.319 ? covale ? covale2 A C PTR 197 A PTR 273 1_555 A N ILE 198 A ILE 274 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? metalc ? metalc1 A OE2 GLU 84 A GLU 160 1_555 D MN MN . A MN 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.712 ? metalc ? metalc2 A NE2 HIS 103 A HIS 179 1_555 D MN MN . A MN 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.211 ? metalc ? metalc3 A OD2 ASP 163 A ASP 239 1_555 C MN MN . A MN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.237 ? metalc ? metalc4 A OD2 ASP 183 A ASP 259 1_555 C MN MN . A MN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? metalc ? metalc5 A O THR 232 A THR 308 1_555 E MN MN . A MN 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.448 ? metalc ? metalc6 C MN MN . A MN 502 1_555 F O HOH . A HOH 616 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.202 ? metalc ? metalc7 C MN MN . A MN 502 1_555 F O HOH . A HOH 667 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.168 ? metalc ? metalc8 C MN MN . A MN 502 1_555 F O HOH . A HOH 675 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.128 ? metalc ? metalc9 C MN MN . A MN 502 1_555 F O HOH . A HOH 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.259 ? metalc ? metalc10 D MN MN . A MN 503 1_555 F O HOH . A HOH 708 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.172 ? metalc ? metalc11 D MN MN . A MN 503 1_555 F O HOH . A HOH 709 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.016 ? metalc ? metalc12 E MN MN . A MN 504 1_555 F O HOH . A HOH 665 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.116 ? metalc ? metalc13 E MN MN . A MN 504 1_555 F O HOH . A HOH 670 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.641 ? metalc ? metalc14 E MN MN . A MN 504 1_555 F O HOH . A HOH 714 6_444 ? ? ? ? ? ? ? ? ? ? ? ? 2.745 ? metalc ? metalc15 E MN MN . A MN 504 1_555 F O HOH . A HOH 771 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.503 ? metalc ? metalc16 E MN MN . A MN 504 1_555 F O HOH . A HOH 778 6_444 ? ? ? ? ? ? ? ? ? ? ? ? 2.094 ? # _chem_comp.formula 'Mn 2' _chem_comp.formula_weight 54.938 _chem_comp.id MN _chem_comp.mon_nstd_flag . _chem_comp.name 'MANGANESE (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 8C2Z _atom_sites.fract_transf_matrix[1][1] 0.008628 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00823 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018511 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 QS0 A 1 501 501 QS0 191 . C 3 MN A 1 502 503 MN MN . D 3 MN A 1 503 504 MN MN . E 3 MN A 1 504 505 MN MN . F 4 HOH A 1 601 185 HOH HOH . F 4 HOH A 2 602 71 HOH HOH . F 4 HOH A 3 603 83 HOH HOH . F 4 HOH A 4 604 174 HOH HOH . F 4 HOH A 5 605 137 HOH HOH . F 4 HOH A 6 606 57 HOH HOH . F 4 HOH A 7 607 112 HOH HOH . F 4 HOH A 8 608 109 HOH HOH . F 4 HOH A 9 609 41 HOH HOH . F 4 HOH A 10 610 135 HOH HOH . F 4 HOH A 11 611 40 HOH HOH . F 4 HOH A 12 612 149 HOH HOH . F 4 HOH A 13 613 27 HOH HOH . F 4 HOH A 14 614 63 HOH HOH . F 4 HOH A 15 615 159 HOH HOH . F 4 HOH A 16 616 120 HOH HOH . F 4 HOH A 17 617 47 HOH HOH . F 4 HOH A 18 618 158 HOH HOH . F 4 HOH A 19 619 105 HOH HOH . F 4 HOH A 20 620 24 HOH HOH . F 4 HOH A 21 621 2 HOH HOH . F 4 HOH A 22 622 1 HOH HOH . F 4 HOH A 23 623 128 HOH HOH . F 4 HOH A 24 624 129 HOH HOH . F 4 HOH A 25 625 36 HOH HOH . F 4 HOH A 26 626 96 HOH HOH . F 4 HOH A 27 627 3 HOH HOH . F 4 HOH A 28 628 52 HOH HOH . F 4 HOH A 29 629 12 HOH HOH . F 4 HOH A 30 630 22 HOH HOH . F 4 HOH A 31 631 131 HOH HOH . F 4 HOH A 32 632 42 HOH HOH . F 4 HOH A 33 633 80 HOH HOH . F 4 HOH A 34 634 51 HOH HOH . F 4 HOH A 35 635 79 HOH HOH . F 4 HOH A 36 636 157 HOH HOH . F 4 HOH A 37 637 88 HOH HOH . F 4 HOH A 38 638 46 HOH HOH . F 4 HOH A 39 639 64 HOH HOH . F 4 HOH A 40 640 140 HOH HOH . F 4 HOH A 41 641 29 HOH HOH . F 4 HOH A 42 642 32 HOH HOH . F 4 HOH A 43 643 15 HOH HOH . F 4 HOH A 44 644 139 HOH HOH . F 4 HOH A 45 645 28 HOH HOH . F 4 HOH A 46 646 104 HOH HOH . F 4 HOH A 47 647 33 HOH HOH . F 4 HOH A 48 648 62 HOH HOH . F 4 HOH A 49 649 11 HOH HOH . F 4 HOH A 50 650 38 HOH HOH . F 4 HOH A 51 651 23 HOH HOH . F 4 HOH A 52 652 5 HOH HOH . F 4 HOH A 53 653 171 HOH HOH . F 4 HOH A 54 654 100 HOH HOH . F 4 HOH A 55 655 17 HOH HOH . F 4 HOH A 56 656 20 HOH HOH . F 4 HOH A 57 657 26 HOH HOH . F 4 HOH A 58 658 72 HOH HOH . F 4 HOH A 59 659 34 HOH HOH . F 4 HOH A 60 660 48 HOH HOH . F 4 HOH A 61 661 25 HOH HOH . F 4 HOH A 62 662 176 HOH HOH . F 4 HOH A 63 663 161 HOH HOH . F 4 HOH A 64 664 138 HOH HOH . F 4 HOH A 65 665 164 HOH HOH . F 4 HOH A 66 666 60 HOH HOH . F 4 HOH A 67 667 121 HOH HOH . F 4 HOH A 68 668 145 HOH HOH . F 4 HOH A 69 669 124 HOH HOH . F 4 HOH A 70 670 165 HOH HOH . F 4 HOH A 71 671 35 HOH HOH . F 4 HOH A 72 672 107 HOH HOH . F 4 HOH A 73 673 75 HOH HOH . F 4 HOH A 74 674 177 HOH HOH . F 4 HOH A 75 675 119 HOH HOH . F 4 HOH A 76 676 21 HOH HOH . F 4 HOH A 77 677 31 HOH HOH . F 4 HOH A 78 678 10 HOH HOH . F 4 HOH A 79 679 61 HOH HOH . F 4 HOH A 80 680 30 HOH HOH . F 4 HOH A 81 681 94 HOH HOH . F 4 HOH A 82 682 7 HOH HOH . F 4 HOH A 83 683 168 HOH HOH . F 4 HOH A 84 684 86 HOH HOH . F 4 HOH A 85 685 82 HOH HOH . F 4 HOH A 86 686 13 HOH HOH . F 4 HOH A 87 687 132 HOH HOH . F 4 HOH A 88 688 144 HOH HOH . F 4 HOH A 89 689 68 HOH HOH . F 4 HOH A 90 690 6 HOH HOH . F 4 HOH A 91 691 54 HOH HOH . F 4 HOH A 92 692 92 HOH HOH . F 4 HOH A 93 693 9 HOH HOH . F 4 HOH A 94 694 87 HOH HOH . F 4 HOH A 95 695 169 HOH HOH . F 4 HOH A 96 696 18 HOH HOH . F 4 HOH A 97 697 134 HOH HOH . F 4 HOH A 98 698 65 HOH HOH . F 4 HOH A 99 699 125 HOH HOH . F 4 HOH A 100 700 67 HOH HOH . F 4 HOH A 101 701 37 HOH HOH . F 4 HOH A 102 702 16 HOH HOH . F 4 HOH A 103 703 122 HOH HOH . F 4 HOH A 104 704 50 HOH HOH . F 4 HOH A 105 705 141 HOH HOH . F 4 HOH A 106 706 130 HOH HOH . F 4 HOH A 107 707 8 HOH HOH . F 4 HOH A 108 708 181 HOH HOH . F 4 HOH A 109 709 180 HOH HOH . F 4 HOH A 110 710 133 HOH HOH . F 4 HOH A 111 711 147 HOH HOH . F 4 HOH A 112 712 148 HOH HOH . F 4 HOH A 113 713 97 HOH HOH . F 4 HOH A 114 714 167 HOH HOH . F 4 HOH A 115 715 59 HOH HOH . F 4 HOH A 116 716 178 HOH HOH . F 4 HOH A 117 717 19 HOH HOH . F 4 HOH A 118 718 170 HOH HOH . F 4 HOH A 119 719 76 HOH HOH . F 4 HOH A 120 720 43 HOH HOH . F 4 HOH A 121 721 77 HOH HOH . F 4 HOH A 122 722 4 HOH HOH . F 4 HOH A 123 723 45 HOH HOH . F 4 HOH A 124 724 93 HOH HOH . F 4 HOH A 125 725 91 HOH HOH . F 4 HOH A 126 726 113 HOH HOH . F 4 HOH A 127 727 123 HOH HOH . F 4 HOH A 128 728 143 HOH HOH . F 4 HOH A 129 729 73 HOH HOH . F 4 HOH A 130 730 115 HOH HOH . F 4 HOH A 131 731 89 HOH HOH . F 4 HOH A 132 732 14 HOH HOH . F 4 HOH A 133 733 74 HOH HOH . F 4 HOH A 134 734 154 HOH HOH . F 4 HOH A 135 735 172 HOH HOH . F 4 HOH A 136 736 108 HOH HOH . F 4 HOH A 137 737 114 HOH HOH . F 4 HOH A 138 738 156 HOH HOH . F 4 HOH A 139 739 183 HOH HOH . F 4 HOH A 140 740 153 HOH HOH . F 4 HOH A 141 741 99 HOH HOH . F 4 HOH A 142 742 142 HOH HOH . F 4 HOH A 143 743 162 HOH HOH . F 4 HOH A 144 744 175 HOH HOH . F 4 HOH A 145 745 69 HOH HOH . F 4 HOH A 146 746 39 HOH HOH . F 4 HOH A 147 747 49 HOH HOH . F 4 HOH A 148 748 81 HOH HOH . F 4 HOH A 149 749 151 HOH HOH . F 4 HOH A 150 750 84 HOH HOH . F 4 HOH A 151 751 179 HOH HOH . F 4 HOH A 152 752 44 HOH HOH . F 4 HOH A 153 753 111 HOH HOH . F 4 HOH A 154 754 90 HOH HOH . F 4 HOH A 155 755 160 HOH HOH . F 4 HOH A 156 756 85 HOH HOH . F 4 HOH A 157 757 103 HOH HOH . F 4 HOH A 158 758 117 HOH HOH . F 4 HOH A 159 759 173 HOH HOH . F 4 HOH A 160 760 182 HOH HOH . F 4 HOH A 161 761 106 HOH HOH . F 4 HOH A 162 762 110 HOH HOH . F 4 HOH A 163 763 146 HOH HOH . F 4 HOH A 164 764 150 HOH HOH . F 4 HOH A 165 765 136 HOH HOH . F 4 HOH A 166 766 116 HOH HOH . F 4 HOH A 167 767 102 HOH HOH . F 4 HOH A 168 768 155 HOH HOH . F 4 HOH A 169 769 118 HOH HOH . F 4 HOH A 170 770 152 HOH HOH . F 4 HOH A 171 771 166 HOH HOH . F 4 HOH A 172 772 70 HOH HOH . F 4 HOH A 173 773 53 HOH HOH . F 4 HOH A 174 774 126 HOH HOH . F 4 HOH A 175 775 55 HOH HOH . F 4 HOH A 176 776 95 HOH HOH . F 4 HOH A 177 777 101 HOH HOH . F 4 HOH A 178 778 163 HOH HOH . F 4 HOH A 179 779 56 HOH HOH . F 4 HOH A 180 780 98 HOH HOH . F 4 HOH A 181 781 184 HOH HOH . F 4 HOH A 182 782 78 HOH HOH . F 4 HOH A 183 783 66 HOH HOH . F 4 HOH A 184 784 127 HOH HOH . F 4 HOH A 185 785 58 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MN _atom_site.label_atom_id MN _atom_site.label_comp_id MN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id E _atom_site.label_entity_id 3 _atom_site.Cartn_x -38.982 _atom_site.Cartn_y -21.657 _atom_site.Cartn_z -13.093 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 88.87 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MN _atom_site.auth_comp_id MN _atom_site.auth_seq_id 504 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 323 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 1 #