data_8C69 # _model_server_result.job_id BjicjO4gappC1CpVrKShYw _model_server_result.datetime_utc '2024-12-26 07:00:55' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8c69 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":601}' # _entry.id 8C69 # _exptl.entry_id 8C69 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 785.55 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FLAVIN-ADENINE DINUCLEOTIDE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8C69 _cell.length_a 103.9 _cell.length_b 103.9 _cell.length_c 52.19 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8C69 _symmetry.cell_setting ? _symmetry.Int_Tables_number 76 _symmetry.space_group_name_Hall 'P 4w' _symmetry.space_group_name_H-M 'P 41' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C27 H33 N9 O15 P2' _chem_comp.formula_weight 785.55 _chem_comp.id FAD _chem_comp.mon_nstd_flag . _chem_comp.name 'FLAVIN-ADENINE DINUCLEOTIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PA O1A FAD doub 83 n n PA O2A FAD sing 84 n n PA O5B FAD sing 85 n n PA O3P FAD sing 86 n n O2A HOA2 FAD sing 87 n n O5B C5B FAD sing 88 n n C5B C4B FAD sing 89 n n C5B H51A FAD sing 90 n n C5B H52A FAD sing 91 n n C4B O4B FAD sing 92 n n C4B C3B FAD sing 93 n n C4B H4B FAD sing 94 n n O4B C1B FAD sing 95 n n C3B O3B FAD sing 96 n n C3B C2B FAD sing 97 n n C3B H3B FAD sing 98 n n O3B HO3A FAD sing 99 n n C2B O2B FAD sing 100 n n C2B C1B FAD sing 101 n n C2B H2B FAD sing 102 n n O2B HO2A FAD sing 103 n n C1B N9A FAD sing 104 n n C1B H1B FAD sing 105 n n N9A C8A FAD sing 106 n y N9A C4A FAD sing 107 n y C8A N7A FAD doub 108 n y C8A H8A FAD sing 109 n n N7A C5A FAD sing 110 n y C5A C6A FAD sing 111 n y C5A C4A FAD doub 112 n y C6A N6A FAD sing 113 n n C6A N1A FAD doub 114 n y N6A H61A FAD sing 115 n n N6A H62A FAD sing 116 n n N1A C2A FAD sing 117 n y C2A N3A FAD doub 118 n y C2A H2A FAD sing 119 n n N3A C4A FAD sing 120 n y N1 C2 FAD sing 121 n n N1 C10 FAD doub 122 n n C2 O2 FAD doub 123 n n C2 N3 FAD sing 124 n n N3 C4 FAD sing 125 n n N3 HN3 FAD sing 126 n n C4 O4 FAD doub 127 n n C4 C4X FAD sing 128 n n C4X N5 FAD doub 129 n n C4X C10 FAD sing 130 n n N5 C5X FAD sing 131 n n C5X C6 FAD doub 132 n y C5X C9A FAD sing 133 n y C6 C7 FAD sing 134 n y C6 H6 FAD sing 135 n n C7 C7M FAD sing 136 n n C7 C8 FAD doub 137 n y C7M HM71 FAD sing 138 n n C7M HM72 FAD sing 139 n n C7M HM73 FAD sing 140 n n C8 C8M FAD sing 141 n n C8 C9 FAD sing 142 n y C8M HM81 FAD sing 143 n n C8M HM82 FAD sing 144 n n C8M HM83 FAD sing 145 n n C9 C9A FAD doub 146 n y C9 H9 FAD sing 147 n n C9A N10 FAD sing 148 n n N10 C10 FAD sing 149 n n N10 C1' FAD sing 150 n n C1' C2' FAD sing 151 n n C1' "H1'1" FAD sing 152 n n C1' "H1'2" FAD sing 153 n n C2' O2' FAD sing 154 n n C2' C3' FAD sing 155 n n C2' H2' FAD sing 156 n n O2' HO2' FAD sing 157 n n C3' O3' FAD sing 158 n n C3' C4' FAD sing 159 n n C3' H3' FAD sing 160 n n O3' HO3' FAD sing 161 n n C4' O4' FAD sing 162 n n C4' C5' FAD sing 163 n n C4' H4' FAD sing 164 n n O4' HO4' FAD sing 165 n n C5' O5' FAD sing 166 n n C5' "H5'1" FAD sing 167 n n C5' "H5'2" FAD sing 168 n n O5' P FAD sing 169 n n P O1P FAD doub 170 n n P O2P FAD sing 171 n n P O3P FAD sing 172 n n O2P HOP2 FAD sing 173 n n # _atom_sites.entry_id 8C69 _atom_sites.fract_transf_matrix[1][1] 0.009625 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009625 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.019161 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FAD A 1 601 521 FAD FAD . C 3 GOL A 1 602 522 GOL GOL . D 4 HOH A 1 701 24 HOH HOH . D 4 HOH A 2 702 130 HOH HOH . D 4 HOH A 3 703 42 HOH HOH . D 4 HOH A 4 704 72 HOH HOH . D 4 HOH A 5 705 117 HOH HOH . D 4 HOH A 6 706 20 HOH HOH . D 4 HOH A 7 707 88 HOH HOH . D 4 HOH A 8 708 58 HOH HOH . D 4 HOH A 9 709 35 HOH HOH . D 4 HOH A 10 710 96 HOH HOH . D 4 HOH A 11 711 120 HOH HOH . D 4 HOH A 12 712 1 HOH HOH . D 4 HOH A 13 713 9 HOH HOH . D 4 HOH A 14 714 101 HOH HOH . D 4 HOH A 15 715 116 HOH HOH . D 4 HOH A 16 716 54 HOH HOH . D 4 HOH A 17 717 118 HOH HOH . D 4 HOH A 18 718 15 HOH HOH . D 4 HOH A 19 719 121 HOH HOH . D 4 HOH A 20 720 91 HOH HOH . D 4 HOH A 21 721 55 HOH HOH . D 4 HOH A 22 722 115 HOH HOH . D 4 HOH A 23 723 34 HOH HOH . D 4 HOH A 24 724 109 HOH HOH . D 4 HOH A 25 725 79 HOH HOH . D 4 HOH A 26 726 14 HOH HOH . D 4 HOH A 27 727 56 HOH HOH . D 4 HOH A 28 728 100 HOH HOH . D 4 HOH A 29 729 84 HOH HOH . D 4 HOH A 30 730 7 HOH HOH . D 4 HOH A 31 731 43 HOH HOH . D 4 HOH A 32 732 52 HOH HOH . D 4 HOH A 33 733 46 HOH HOH . D 4 HOH A 34 734 107 HOH HOH . D 4 HOH A 35 735 104 HOH HOH . D 4 HOH A 36 736 144 HOH HOH . D 4 HOH A 37 737 17 HOH HOH . D 4 HOH A 38 738 95 HOH HOH . D 4 HOH A 39 739 94 HOH HOH . D 4 HOH A 40 740 71 HOH HOH . D 4 HOH A 41 741 102 HOH HOH . D 4 HOH A 42 742 38 HOH HOH . D 4 HOH A 43 743 62 HOH HOH . D 4 HOH A 44 744 40 HOH HOH . D 4 HOH A 45 745 18 HOH HOH . D 4 HOH A 46 746 92 HOH HOH . D 4 HOH A 47 747 75 HOH HOH . D 4 HOH A 48 748 28 HOH HOH . D 4 HOH A 49 749 132 HOH HOH . D 4 HOH A 50 750 30 HOH HOH . D 4 HOH A 51 751 65 HOH HOH . D 4 HOH A 52 752 142 HOH HOH . D 4 HOH A 53 753 5 HOH HOH . D 4 HOH A 54 754 27 HOH HOH . D 4 HOH A 55 755 216 HOH HOH . D 4 HOH A 56 756 123 HOH HOH . D 4 HOH A 57 757 73 HOH HOH . D 4 HOH A 58 758 48 HOH HOH . D 4 HOH A 59 759 32 HOH HOH . D 4 HOH A 60 760 47 HOH HOH . D 4 HOH A 61 761 126 HOH HOH . D 4 HOH A 62 762 45 HOH HOH . D 4 HOH A 63 763 3 HOH HOH . D 4 HOH A 64 764 217 HOH HOH . D 4 HOH A 65 765 50 HOH HOH . D 4 HOH A 66 766 6 HOH HOH . D 4 HOH A 67 767 77 HOH HOH . D 4 HOH A 68 768 154 HOH HOH . D 4 HOH A 69 769 136 HOH HOH . D 4 HOH A 70 770 85 HOH HOH . D 4 HOH A 71 771 10 HOH HOH . D 4 HOH A 72 772 64 HOH HOH . D 4 HOH A 73 773 125 HOH HOH . D 4 HOH A 74 774 86 HOH HOH . D 4 HOH A 75 775 23 HOH HOH . D 4 HOH A 76 776 36 HOH HOH . D 4 HOH A 77 777 16 HOH HOH . D 4 HOH A 78 778 81 HOH HOH . D 4 HOH A 79 779 151 HOH HOH . D 4 HOH A 80 780 74 HOH HOH . D 4 HOH A 81 781 4 HOH HOH . D 4 HOH A 82 782 137 HOH HOH . D 4 HOH A 83 783 12 HOH HOH . D 4 HOH A 84 784 37 HOH HOH . D 4 HOH A 85 785 108 HOH HOH . D 4 HOH A 86 786 39 HOH HOH . D 4 HOH A 87 787 119 HOH HOH . D 4 HOH A 88 788 114 HOH HOH . D 4 HOH A 89 789 41 HOH HOH . D 4 HOH A 90 790 70 HOH HOH . D 4 HOH A 91 791 106 HOH HOH . D 4 HOH A 92 792 97 HOH HOH . D 4 HOH A 93 793 11 HOH HOH . D 4 HOH A 94 794 26 HOH HOH . D 4 HOH A 95 795 29 HOH HOH . D 4 HOH A 96 796 63 HOH HOH . D 4 HOH A 97 797 2 HOH HOH . D 4 HOH A 98 798 61 HOH HOH . D 4 HOH A 99 799 135 HOH HOH . D 4 HOH A 100 800 93 HOH HOH . D 4 HOH A 101 801 21 HOH HOH . D 4 HOH A 102 802 19 HOH HOH . D 4 HOH A 103 803 80 HOH HOH . D 4 HOH A 104 804 44 HOH HOH . D 4 HOH A 105 805 157 HOH HOH . D 4 HOH A 106 806 8 HOH HOH . D 4 HOH A 107 807 49 HOH HOH . D 4 HOH A 108 808 57 HOH HOH . D 4 HOH A 109 809 215 HOH HOH . D 4 HOH A 110 810 59 HOH HOH . D 4 HOH A 111 811 22 HOH HOH . D 4 HOH A 112 812 89 HOH HOH . D 4 HOH A 113 813 69 HOH HOH . D 4 HOH A 114 814 147 HOH HOH . D 4 HOH A 115 815 67 HOH HOH . D 4 HOH A 116 816 13 HOH HOH . D 4 HOH A 117 817 31 HOH HOH . D 4 HOH A 118 818 131 HOH HOH . D 4 HOH A 119 819 124 HOH HOH . D 4 HOH A 120 820 103 HOH HOH . D 4 HOH A 121 821 160 HOH HOH . D 4 HOH A 122 822 134 HOH HOH . D 4 HOH A 123 823 150 HOH HOH . D 4 HOH A 124 824 105 HOH HOH . D 4 HOH A 125 825 90 HOH HOH . D 4 HOH A 126 826 25 HOH HOH . D 4 HOH A 127 827 122 HOH HOH . D 4 HOH A 128 828 197 HOH HOH . D 4 HOH A 129 829 214 HOH HOH . D 4 HOH A 130 830 140 HOH HOH . D 4 HOH A 131 831 112 HOH HOH . D 4 HOH A 132 832 149 HOH HOH . D 4 HOH A 133 833 143 HOH HOH . D 4 HOH A 134 834 156 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA FAD . . . B 2 1.759 39.321 9.628 1 9.86 ? PA FAD 601 A 1 HETATM 2 O O1A FAD . . . B 2 0.574 38.578 10.17 1 3.3 ? O1A FAD 601 A 1 HETATM 3 O O2A FAD . . . B 2 1.769 40.823 9.552 1 3.28 ? O2A FAD 601 A 1 HETATM 4 O O5B FAD . . . B 2 3.093 38.826 10.392 1 4.32 ? O5B FAD 601 A 1 HETATM 5 C C5B FAD . . . B 2 4.328 39.603 10.388 1 4.1 ? C5B FAD 601 A 1 HETATM 6 C C4B FAD . . . B 2 5.488 38.72 9.989 1 4.04 ? C4B FAD 601 A 1 HETATM 7 O O4B FAD . . . B 2 5.579 37.525 10.81 1 3.8 ? O4B FAD 601 A 1 HETATM 8 C C3B FAD . . . B 2 5.487 38.199 8.551 1 5.39 ? C3B FAD 601 A 1 HETATM 9 O O3B FAD . . . B 2 6.022 39.197 7.696 1 3.02 ? O3B FAD 601 A 1 HETATM 10 C C2B FAD . . . B 2 6.412 36.982 8.665 1 5.15 ? C2B FAD 601 A 1 HETATM 11 O O2B FAD . . . B 2 7.773 37.349 8.658 1 2.67 ? O2B FAD 601 A 1 HETATM 12 C C1B FAD . . . B 2 5.996 36.428 10.023 1 4.41 ? C1B FAD 601 A 1 HETATM 13 N N9A FAD . . . B 2 4.902 35.456 9.949 1 3.77 ? N9A FAD 601 A 1 HETATM 14 C C8A FAD . . . B 2 3.554 35.706 10.023 1 4.33 ? C8A FAD 601 A 1 HETATM 15 N N7A FAD . . . B 2 2.83 34.611 9.932 1 5.12 ? N7A FAD 601 A 1 HETATM 16 C C5A FAD . . . B 2 3.764 33.592 9.775 1 4.59 ? C5A FAD 601 A 1 HETATM 17 C C6A FAD . . . B 2 3.621 32.201 9.628 1 4.19 ? C6A FAD 601 A 1 HETATM 18 N N6A FAD . . . B 2 2.445 31.591 9.605 1 4.19 ? N6A FAD 601 A 1 HETATM 19 N N1A FAD . . . B 2 4.757 31.473 9.486 1 3.69 ? N1A FAD 601 A 1 HETATM 20 C C2A FAD . . . B 2 5.94 32.108 9.515 1 4.35 ? C2A FAD 601 A 1 HETATM 21 N N3A FAD . . . B 2 6.191 33.408 9.662 1 3.37 ? N3A FAD 601 A 1 HETATM 22 C C4A FAD . . . B 2 5.041 34.103 9.779 1 4.89 ? C4A FAD 601 A 1 HETATM 23 N N1 FAD . . . B 2 5.571 33.465 4.896 1 2.92 ? N1 FAD 601 A 1 HETATM 24 C C2 FAD . . . B 2 6.676 33.978 4.295 1 4.43 ? C2 FAD 601 A 1 HETATM 25 O O2 FAD . . . B 2 7.269 34.956 4.785 1 3.17 ? O2 FAD 601 A 1 HETATM 26 N N3 FAD . . . B 2 7.199 33.409 3.157 1 3.53 ? N3 FAD 601 A 1 HETATM 27 C C4 FAD . . . B 2 6.594 32.339 2.529 1 3.66 ? C4 FAD 601 A 1 HETATM 28 O O4 FAD . . . B 2 7.096 31.852 1.512 1 1.87 ? O4 FAD 601 A 1 HETATM 29 C C4X FAD . . . B 2 5.42 31.815 3.117 1 2.83 ? C4X FAD 601 A 1 HETATM 30 N N5 FAD . . . B 2 4.844 30.789 2.549 1 3.59 ? N5 FAD 601 A 1 HETATM 31 C C5X FAD . . . B 2 3.694 30.306 3.125 1 3.85 ? C5X FAD 601 A 1 HETATM 32 C C6 FAD . . . B 2 3.041 29.234 2.504 1 2.55 ? C6 FAD 601 A 1 HETATM 33 C C7 FAD . . . B 2 1.869 28.717 3.006 1 3.66 ? C7 FAD 601 A 1 HETATM 34 C C7M FAD . . . B 2 1.18 27.576 2.307 1 3.59 ? C7M FAD 601 A 1 HETATM 35 C C8 FAD . . . B 2 1.336 29.254 4.195 1 3.76 ? C8 FAD 601 A 1 HETATM 36 C C8M FAD . . . B 2 0.066 28.693 4.782 1 4.51 ? C8M FAD 601 A 1 HETATM 37 C C9 FAD . . . B 2 1.996 30.276 4.841 1 2.68 ? C9 FAD 601 A 1 HETATM 38 C C9A FAD . . . B 2 3.173 30.84 4.318 1 1.13 ? C9A FAD 601 A 1 HETATM 39 N N10 FAD . . . B 2 3.821 31.917 4.911 1 1.91 ? N10 FAD 601 A 1 HETATM 40 C C10 FAD . . . B 2 4.962 32.448 4.331 1 2.76 ? C10 FAD 601 A 1 HETATM 41 C C1' FAD . . . B 2 3.341 32.447 6.209 1 1.97 ? C1' FAD 601 A 1 HETATM 42 C C2' FAD . . . B 2 2.346 33.572 6.144 1 2.11 ? C2' FAD 601 A 1 HETATM 43 O O2' FAD . . . B 2 1.301 33.264 5.259 1 1.83 ? O2' FAD 601 A 1 HETATM 44 C C3' FAD . . . B 2 3.019 34.874 5.737 1 3.13 ? C3' FAD 601 A 1 HETATM 45 O O3' FAD . . . B 2 4.182 35.069 6.523 1 3.93 ? O3' FAD 601 A 1 HETATM 46 C C4' FAD . . . B 2 2.103 36.076 5.945 1 4.33 ? C4' FAD 601 A 1 HETATM 47 O O4' FAD . . . B 2 0.958 35.939 5.108 1 4.59 ? O4' FAD 601 A 1 HETATM 48 C C5' FAD . . . B 2 2.797 37.374 5.614 1 4.8 ? C5' FAD 601 A 1 HETATM 49 O O5' FAD . . . B 2 1.825 38.441 5.654 1 5.26 ? O5' FAD 601 A 1 HETATM 50 P P FAD . . . B 2 2.053 39.59 6.751 1 67.05 ? P FAD 601 A 1 HETATM 51 O O1P FAD . . . B 2 3.466 40.045 6.649 1 11.07 ? O1P FAD 601 A 1 HETATM 52 O O2P FAD . . . B 2 0.985 40.632 6.684 1 9.7 ? O2P FAD 601 A 1 HETATM 53 O O3P FAD . . . B 2 1.913 38.768 8.125 1 6.14 ? O3P FAD 601 A 1 # _model_server_stats.io_time_ms 48 _model_server_stats.parse_time_ms 29 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 755 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 53 #