data_8C69 # _model_server_result.job_id dHbBH2RHKE905Ooum4PM8Q _model_server_result.datetime_utc '2024-11-08 06:12:17' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8c69 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":602}' # _entry.id 8C69 # _exptl.entry_id 8C69 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8C69 _cell.length_a 103.9 _cell.length_b 103.9 _cell.length_c 52.19 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8C69 _symmetry.cell_setting ? _symmetry.Int_Tables_number 76 _symmetry.space_group_name_Hall 'P 4w' _symmetry.space_group_name_H-M 'P 41' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 220 n n C1 C2 GOL sing 221 n n C1 H11 GOL sing 222 n n C1 H12 GOL sing 223 n n O1 HO1 GOL sing 224 n n C2 O2 GOL sing 225 n n C2 C3 GOL sing 226 n n C2 H2 GOL sing 227 n n O2 HO2 GOL sing 228 n n C3 O3 GOL sing 229 n n C3 H31 GOL sing 230 n n C3 H32 GOL sing 231 n n O3 HO3 GOL sing 232 n n # _atom_sites.entry_id 8C69 _atom_sites.fract_transf_matrix[1][1] 0.009625 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009625 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.019161 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FAD A 1 601 521 FAD FAD . C 3 GOL A 1 602 522 GOL GOL . D 4 HOH A 1 701 24 HOH HOH . D 4 HOH A 2 702 130 HOH HOH . D 4 HOH A 3 703 42 HOH HOH . D 4 HOH A 4 704 72 HOH HOH . D 4 HOH A 5 705 117 HOH HOH . D 4 HOH A 6 706 20 HOH HOH . D 4 HOH A 7 707 88 HOH HOH . D 4 HOH A 8 708 58 HOH HOH . D 4 HOH A 9 709 35 HOH HOH . D 4 HOH A 10 710 96 HOH HOH . D 4 HOH A 11 711 120 HOH HOH . D 4 HOH A 12 712 1 HOH HOH . D 4 HOH A 13 713 9 HOH HOH . D 4 HOH A 14 714 101 HOH HOH . D 4 HOH A 15 715 116 HOH HOH . D 4 HOH A 16 716 54 HOH HOH . D 4 HOH A 17 717 118 HOH HOH . D 4 HOH A 18 718 15 HOH HOH . D 4 HOH A 19 719 121 HOH HOH . D 4 HOH A 20 720 91 HOH HOH . D 4 HOH A 21 721 55 HOH HOH . D 4 HOH A 22 722 115 HOH HOH . D 4 HOH A 23 723 34 HOH HOH . D 4 HOH A 24 724 109 HOH HOH . D 4 HOH A 25 725 79 HOH HOH . D 4 HOH A 26 726 14 HOH HOH . D 4 HOH A 27 727 56 HOH HOH . D 4 HOH A 28 728 100 HOH HOH . D 4 HOH A 29 729 84 HOH HOH . D 4 HOH A 30 730 7 HOH HOH . D 4 HOH A 31 731 43 HOH HOH . D 4 HOH A 32 732 52 HOH HOH . D 4 HOH A 33 733 46 HOH HOH . D 4 HOH A 34 734 107 HOH HOH . D 4 HOH A 35 735 104 HOH HOH . D 4 HOH A 36 736 144 HOH HOH . D 4 HOH A 37 737 17 HOH HOH . D 4 HOH A 38 738 95 HOH HOH . D 4 HOH A 39 739 94 HOH HOH . D 4 HOH A 40 740 71 HOH HOH . D 4 HOH A 41 741 102 HOH HOH . D 4 HOH A 42 742 38 HOH HOH . D 4 HOH A 43 743 62 HOH HOH . D 4 HOH A 44 744 40 HOH HOH . D 4 HOH A 45 745 18 HOH HOH . D 4 HOH A 46 746 92 HOH HOH . D 4 HOH A 47 747 75 HOH HOH . D 4 HOH A 48 748 28 HOH HOH . D 4 HOH A 49 749 132 HOH HOH . D 4 HOH A 50 750 30 HOH HOH . D 4 HOH A 51 751 65 HOH HOH . D 4 HOH A 52 752 142 HOH HOH . D 4 HOH A 53 753 5 HOH HOH . D 4 HOH A 54 754 27 HOH HOH . D 4 HOH A 55 755 216 HOH HOH . D 4 HOH A 56 756 123 HOH HOH . D 4 HOH A 57 757 73 HOH HOH . D 4 HOH A 58 758 48 HOH HOH . D 4 HOH A 59 759 32 HOH HOH . D 4 HOH A 60 760 47 HOH HOH . D 4 HOH A 61 761 126 HOH HOH . D 4 HOH A 62 762 45 HOH HOH . D 4 HOH A 63 763 3 HOH HOH . D 4 HOH A 64 764 217 HOH HOH . D 4 HOH A 65 765 50 HOH HOH . D 4 HOH A 66 766 6 HOH HOH . D 4 HOH A 67 767 77 HOH HOH . D 4 HOH A 68 768 154 HOH HOH . D 4 HOH A 69 769 136 HOH HOH . D 4 HOH A 70 770 85 HOH HOH . D 4 HOH A 71 771 10 HOH HOH . D 4 HOH A 72 772 64 HOH HOH . D 4 HOH A 73 773 125 HOH HOH . D 4 HOH A 74 774 86 HOH HOH . D 4 HOH A 75 775 23 HOH HOH . D 4 HOH A 76 776 36 HOH HOH . D 4 HOH A 77 777 16 HOH HOH . D 4 HOH A 78 778 81 HOH HOH . D 4 HOH A 79 779 151 HOH HOH . D 4 HOH A 80 780 74 HOH HOH . D 4 HOH A 81 781 4 HOH HOH . D 4 HOH A 82 782 137 HOH HOH . D 4 HOH A 83 783 12 HOH HOH . D 4 HOH A 84 784 37 HOH HOH . D 4 HOH A 85 785 108 HOH HOH . D 4 HOH A 86 786 39 HOH HOH . D 4 HOH A 87 787 119 HOH HOH . D 4 HOH A 88 788 114 HOH HOH . D 4 HOH A 89 789 41 HOH HOH . D 4 HOH A 90 790 70 HOH HOH . D 4 HOH A 91 791 106 HOH HOH . D 4 HOH A 92 792 97 HOH HOH . D 4 HOH A 93 793 11 HOH HOH . D 4 HOH A 94 794 26 HOH HOH . D 4 HOH A 95 795 29 HOH HOH . D 4 HOH A 96 796 63 HOH HOH . D 4 HOH A 97 797 2 HOH HOH . D 4 HOH A 98 798 61 HOH HOH . D 4 HOH A 99 799 135 HOH HOH . D 4 HOH A 100 800 93 HOH HOH . D 4 HOH A 101 801 21 HOH HOH . D 4 HOH A 102 802 19 HOH HOH . D 4 HOH A 103 803 80 HOH HOH . D 4 HOH A 104 804 44 HOH HOH . D 4 HOH A 105 805 157 HOH HOH . D 4 HOH A 106 806 8 HOH HOH . D 4 HOH A 107 807 49 HOH HOH . D 4 HOH A 108 808 57 HOH HOH . D 4 HOH A 109 809 215 HOH HOH . D 4 HOH A 110 810 59 HOH HOH . D 4 HOH A 111 811 22 HOH HOH . D 4 HOH A 112 812 89 HOH HOH . D 4 HOH A 113 813 69 HOH HOH . D 4 HOH A 114 814 147 HOH HOH . D 4 HOH A 115 815 67 HOH HOH . D 4 HOH A 116 816 13 HOH HOH . D 4 HOH A 117 817 31 HOH HOH . D 4 HOH A 118 818 131 HOH HOH . D 4 HOH A 119 819 124 HOH HOH . D 4 HOH A 120 820 103 HOH HOH . D 4 HOH A 121 821 160 HOH HOH . D 4 HOH A 122 822 134 HOH HOH . D 4 HOH A 123 823 150 HOH HOH . D 4 HOH A 124 824 105 HOH HOH . D 4 HOH A 125 825 90 HOH HOH . D 4 HOH A 126 826 25 HOH HOH . D 4 HOH A 127 827 122 HOH HOH . D 4 HOH A 128 828 197 HOH HOH . D 4 HOH A 129 829 214 HOH HOH . D 4 HOH A 130 830 140 HOH HOH . D 4 HOH A 131 831 112 HOH HOH . D 4 HOH A 132 832 149 HOH HOH . D 4 HOH A 133 833 143 HOH HOH . D 4 HOH A 134 834 156 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . C 3 -0.635 29.018 11.022 1 18.31 ? C1 GOL 602 A 1 HETATM 2 O O1 GOL . . . C 3 -2.035 29.021 11.034 1 15.09 ? O1 GOL 602 A 1 HETATM 3 C C2 GOL . . . C 3 -0.195 27.914 10.118 1 15.78 ? C2 GOL 602 A 1 HETATM 4 O O2 GOL . . . C 3 0.08 28.313 8.84 1 12.89 ? O2 GOL 602 A 1 HETATM 5 C C3 GOL . . . C 3 1.099 27.371 10.76 1 18.16 ? C3 GOL 602 A 1 HETATM 6 O O3 GOL . . . C 3 2.097 28.399 10.803 1 9.69 ? O3 GOL 602 A 1 HETATM 7 H H11 GOL . . . C 3 -0.256 28.878 11.904 1 22.42 ? H11 GOL 602 A 1 HETATM 8 H H12 GOL . . . C 3 -0.265 29.857 10.704 1 22.42 ? H12 GOL 602 A 1 HETATM 9 H HO1 GOL . . . C 3 -2.277 29.784 11.345 1 18.55 ? HO1 GOL 602 A 1 HETATM 10 H H2 GOL . . . C 3 -0.913 27.265 10.062 1 19.38 ? H2 GOL 602 A 1 HETATM 11 H HO2 GOL . . . C 3 0.81 28.78 8.863 1 15.91 ? HO2 GOL 602 A 1 HETATM 12 H H31 GOL . . . C 3 1.382 26.596 10.25 1 22.24 ? H31 GOL 602 A 1 HETATM 13 H H32 GOL . . . C 3 0.874 27.031 11.64 1 22.24 ? H32 GOL 602 A 1 HETATM 14 H HO3 GOL . . . C 3 1.874 28.941 11.406 1 12.07 ? HO3 GOL 602 A 1 # _model_server_stats.io_time_ms 100 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 219 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 14 #