data_8C6H # _model_server_result.job_id Lm8QI-RTYhqnWC9epAfPww _model_server_result.datetime_utc '2024-11-30 01:04:52' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8c6h # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":601}' # _entry.id 8C6H # _exptl.entry_id 8C6H _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 785.55 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FLAVIN-ADENINE DINUCLEOTIDE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8C6H _cell.length_a 103.9 _cell.length_b 103.9 _cell.length_c 52.19 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8C6H _symmetry.cell_setting ? _symmetry.Int_Tables_number 76 _symmetry.space_group_name_Hall 'P 4w' _symmetry.space_group_name_H-M 'P 41' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C27 H33 N9 O15 P2' _chem_comp.formula_weight 785.55 _chem_comp.id FAD _chem_comp.mon_nstd_flag . _chem_comp.name 'FLAVIN-ADENINE DINUCLEOTIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PA O1A FAD doub 83 n n PA O2A FAD sing 84 n n PA O5B FAD sing 85 n n PA O3P FAD sing 86 n n O2A HOA2 FAD sing 87 n n O5B C5B FAD sing 88 n n C5B C4B FAD sing 89 n n C5B H51A FAD sing 90 n n C5B H52A FAD sing 91 n n C4B O4B FAD sing 92 n n C4B C3B FAD sing 93 n n C4B H4B FAD sing 94 n n O4B C1B FAD sing 95 n n C3B O3B FAD sing 96 n n C3B C2B FAD sing 97 n n C3B H3B FAD sing 98 n n O3B HO3A FAD sing 99 n n C2B O2B FAD sing 100 n n C2B C1B FAD sing 101 n n C2B H2B FAD sing 102 n n O2B HO2A FAD sing 103 n n C1B N9A FAD sing 104 n n C1B H1B FAD sing 105 n n N9A C8A FAD sing 106 n y N9A C4A FAD sing 107 n y C8A N7A FAD doub 108 n y C8A H8A FAD sing 109 n n N7A C5A FAD sing 110 n y C5A C6A FAD sing 111 n y C5A C4A FAD doub 112 n y C6A N6A FAD sing 113 n n C6A N1A FAD doub 114 n y N6A H61A FAD sing 115 n n N6A H62A FAD sing 116 n n N1A C2A FAD sing 117 n y C2A N3A FAD doub 118 n y C2A H2A FAD sing 119 n n N3A C4A FAD sing 120 n y N1 C2 FAD sing 121 n n N1 C10 FAD doub 122 n n C2 O2 FAD doub 123 n n C2 N3 FAD sing 124 n n N3 C4 FAD sing 125 n n N3 HN3 FAD sing 126 n n C4 O4 FAD doub 127 n n C4 C4X FAD sing 128 n n C4X N5 FAD doub 129 n n C4X C10 FAD sing 130 n n N5 C5X FAD sing 131 n n C5X C6 FAD doub 132 n y C5X C9A FAD sing 133 n y C6 C7 FAD sing 134 n y C6 H6 FAD sing 135 n n C7 C7M FAD sing 136 n n C7 C8 FAD doub 137 n y C7M HM71 FAD sing 138 n n C7M HM72 FAD sing 139 n n C7M HM73 FAD sing 140 n n C8 C8M FAD sing 141 n n C8 C9 FAD sing 142 n y C8M HM81 FAD sing 143 n n C8M HM82 FAD sing 144 n n C8M HM83 FAD sing 145 n n C9 C9A FAD doub 146 n y C9 H9 FAD sing 147 n n C9A N10 FAD sing 148 n n N10 C10 FAD sing 149 n n N10 C1' FAD sing 150 n n C1' C2' FAD sing 151 n n C1' "H1'1" FAD sing 152 n n C1' "H1'2" FAD sing 153 n n C2' O2' FAD sing 154 n n C2' C3' FAD sing 155 n n C2' H2' FAD sing 156 n n O2' HO2' FAD sing 157 n n C3' O3' FAD sing 158 n n C3' C4' FAD sing 159 n n C3' H3' FAD sing 160 n n O3' HO3' FAD sing 161 n n C4' O4' FAD sing 162 n n C4' C5' FAD sing 163 n n C4' H4' FAD sing 164 n n O4' HO4' FAD sing 165 n n C5' O5' FAD sing 166 n n C5' "H5'1" FAD sing 167 n n C5' "H5'2" FAD sing 168 n n O5' P FAD sing 169 n n P O1P FAD doub 170 n n P O2P FAD sing 171 n n P O3P FAD sing 172 n n O2P HOP2 FAD sing 173 n n # _atom_sites.entry_id 8C6H _atom_sites.fract_transf_matrix[1][1] 0.009625 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009625 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.019161 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FAD A 1 601 521 FAD FAD . C 3 GOL A 1 602 522 GOL GOL . D 4 HOH A 1 701 130 HOH HOH . D 4 HOH A 2 702 96 HOH HOH . D 4 HOH A 3 703 116 HOH HOH . D 4 HOH A 4 704 41 HOH HOH . D 4 HOH A 5 705 58 HOH HOH . D 4 HOH A 6 706 42 HOH HOH . D 4 HOH A 7 707 24 HOH HOH . D 4 HOH A 8 708 35 HOH HOH . D 4 HOH A 9 709 71 HOH HOH . D 4 HOH A 10 710 14 HOH HOH . D 4 HOH A 11 711 1 HOH HOH . D 4 HOH A 12 712 74 HOH HOH . D 4 HOH A 13 713 40 HOH HOH . D 4 HOH A 14 714 37 HOH HOH . D 4 HOH A 15 715 118 HOH HOH . D 4 HOH A 16 716 120 HOH HOH . D 4 HOH A 17 717 104 HOH HOH . D 4 HOH A 18 718 144 HOH HOH . D 4 HOH A 19 719 136 HOH HOH . D 4 HOH A 20 720 115 HOH HOH . D 4 HOH A 21 721 7 HOH HOH . D 4 HOH A 22 722 101 HOH HOH . D 4 HOH A 23 723 9 HOH HOH . D 4 HOH A 24 724 62 HOH HOH . D 4 HOH A 25 725 123 HOH HOH . D 4 HOH A 26 726 107 HOH HOH . D 4 HOH A 27 727 47 HOH HOH . D 4 HOH A 28 728 121 HOH HOH . D 4 HOH A 29 729 48 HOH HOH . D 4 HOH A 30 730 126 HOH HOH . D 4 HOH A 31 731 92 HOH HOH . D 4 HOH A 32 732 15 HOH HOH . D 4 HOH A 33 733 125 HOH HOH . D 4 HOH A 34 734 20 HOH HOH . D 4 HOH A 35 735 106 HOH HOH . D 4 HOH A 36 736 55 HOH HOH . D 4 HOH A 37 737 142 HOH HOH . D 4 HOH A 38 738 84 HOH HOH . D 4 HOH A 39 739 52 HOH HOH . D 4 HOH A 40 740 27 HOH HOH . D 4 HOH A 41 741 46 HOH HOH . D 4 HOH A 42 742 95 HOH HOH . D 4 HOH A 43 743 111 HOH HOH . D 4 HOH A 44 744 97 HOH HOH . D 4 HOH A 45 745 17 HOH HOH . D 4 HOH A 46 746 79 HOH HOH . D 4 HOH A 47 747 10 HOH HOH . D 4 HOH A 48 748 137 HOH HOH . D 4 HOH A 49 749 65 HOH HOH . D 4 HOH A 50 750 132 HOH HOH . D 4 HOH A 51 751 88 HOH HOH . D 4 HOH A 52 752 43 HOH HOH . D 4 HOH A 53 753 18 HOH HOH . D 4 HOH A 54 754 23 HOH HOH . D 4 HOH A 55 755 39 HOH HOH . D 4 HOH A 56 756 56 HOH HOH . D 4 HOH A 57 757 29 HOH HOH . D 4 HOH A 58 758 73 HOH HOH . D 4 HOH A 59 759 109 HOH HOH . D 4 HOH A 60 760 3 HOH HOH . D 4 HOH A 61 761 102 HOH HOH . D 4 HOH A 62 762 11 HOH HOH . D 4 HOH A 63 763 77 HOH HOH . D 4 HOH A 64 764 119 HOH HOH . D 4 HOH A 65 765 28 HOH HOH . D 4 HOH A 66 766 50 HOH HOH . D 4 HOH A 67 767 86 HOH HOH . D 4 HOH A 68 768 100 HOH HOH . D 4 HOH A 69 769 91 HOH HOH . D 4 HOH A 70 770 114 HOH HOH . D 4 HOH A 71 771 26 HOH HOH . D 4 HOH A 72 772 63 HOH HOH . D 4 HOH A 73 773 81 HOH HOH . D 4 HOH A 74 774 64 HOH HOH . D 4 HOH A 75 775 5 HOH HOH . D 4 HOH A 76 776 32 HOH HOH . D 4 HOH A 77 777 34 HOH HOH . D 4 HOH A 78 778 21 HOH HOH . D 4 HOH A 79 779 6 HOH HOH . D 4 HOH A 80 780 4 HOH HOH . D 4 HOH A 81 781 8 HOH HOH . D 4 HOH A 82 782 85 HOH HOH . D 4 HOH A 83 783 49 HOH HOH . D 4 HOH A 84 784 30 HOH HOH . D 4 HOH A 85 785 154 HOH HOH . D 4 HOH A 86 786 36 HOH HOH . D 4 HOH A 87 787 19 HOH HOH . D 4 HOH A 88 788 94 HOH HOH . D 4 HOH A 89 789 38 HOH HOH . D 4 HOH A 90 790 54 HOH HOH . D 4 HOH A 91 791 75 HOH HOH . D 4 HOH A 92 792 45 HOH HOH . D 4 HOH A 93 793 70 HOH HOH . D 4 HOH A 94 794 135 HOH HOH . D 4 HOH A 95 795 59 HOH HOH . D 4 HOH A 96 796 16 HOH HOH . D 4 HOH A 97 797 80 HOH HOH . D 4 HOH A 98 798 151 HOH HOH . D 4 HOH A 99 799 12 HOH HOH . D 4 HOH A 100 800 22 HOH HOH . D 4 HOH A 101 801 57 HOH HOH . D 4 HOH A 102 802 103 HOH HOH . D 4 HOH A 103 803 124 HOH HOH . D 4 HOH A 104 804 117 HOH HOH . D 4 HOH A 105 805 157 HOH HOH . D 4 HOH A 106 806 61 HOH HOH . D 4 HOH A 107 807 147 HOH HOH . D 4 HOH A 108 808 108 HOH HOH . D 4 HOH A 109 809 72 HOH HOH . D 4 HOH A 110 810 69 HOH HOH . D 4 HOH A 111 811 197 HOH HOH . D 4 HOH A 112 812 134 HOH HOH . D 4 HOH A 113 813 2 HOH HOH . D 4 HOH A 114 814 105 HOH HOH . D 4 HOH A 115 815 44 HOH HOH . D 4 HOH A 116 816 89 HOH HOH . D 4 HOH A 117 817 160 HOH HOH . D 4 HOH A 118 818 13 HOH HOH . D 4 HOH A 119 819 93 HOH HOH . D 4 HOH A 120 820 31 HOH HOH . D 4 HOH A 121 821 67 HOH HOH . D 4 HOH A 122 822 90 HOH HOH . D 4 HOH A 123 823 131 HOH HOH . D 4 HOH A 124 824 150 HOH HOH . D 4 HOH A 125 825 122 HOH HOH . D 4 HOH A 126 826 112 HOH HOH . D 4 HOH A 127 827 25 HOH HOH . D 4 HOH A 128 828 214 HOH HOH . D 4 HOH A 129 829 140 HOH HOH . D 4 HOH A 130 830 149 HOH HOH . D 4 HOH A 131 831 143 HOH HOH . D 4 HOH A 132 832 156 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA FAD . . . B 2 1.843 39.399 9.526 1 4.57 ? PA FAD 601 A 1 HETATM 2 O O1A FAD . . . B 2 0.663 38.679 10.074 1 3.58 ? O1A FAD 601 A 1 HETATM 3 O O2A FAD . . . B 2 1.762 40.899 9.465 1 5.06 ? O2A FAD 601 A 1 HETATM 4 O O5B FAD . . . B 2 3.134 38.897 10.322 1 3.91 ? O5B FAD 601 A 1 HETATM 5 C C5B FAD . . . B 2 4.382 39.617 10.424 1 3.81 ? C5B FAD 601 A 1 HETATM 6 C C4B FAD . . . B 2 5.497 38.697 10.003 1 2.84 ? C4B FAD 601 A 1 HETATM 7 O O4B FAD . . . B 2 5.504 37.484 10.799 1 3.63 ? O4B FAD 601 A 1 HETATM 8 C C3B FAD . . . B 2 5.465 38.198 8.558 1 5.11 ? C3B FAD 601 A 1 HETATM 9 O O3B FAD . . . B 2 5.991 39.201 7.702 1 3.94 ? O3B FAD 601 A 1 HETATM 10 C C2B FAD . . . B 2 6.364 36.964 8.646 1 3.41 ? C2B FAD 601 A 1 HETATM 11 O O2B FAD . . . B 2 7.726 37.322 8.664 1 3.1 ? O2B FAD 601 A 1 HETATM 12 C C1B FAD . . . B 2 5.962 36.401 10.01 1 3.46 ? C1B FAD 601 A 1 HETATM 13 N N9A FAD . . . B 2 4.884 35.441 9.912 1 2.55 ? N9A FAD 601 A 1 HETATM 14 C C8A FAD . . . B 2 3.541 35.678 9.927 1 2.97 ? C8A FAD 601 A 1 HETATM 15 N N7A FAD . . . B 2 2.831 34.582 9.815 1 3.38 ? N7A FAD 601 A 1 HETATM 16 C C5A FAD . . . B 2 3.763 33.56 9.71 1 2.68 ? C5A FAD 601 A 1 HETATM 17 C C6A FAD . . . B 2 3.652 32.164 9.572 1 4.41 ? C6A FAD 601 A 1 HETATM 18 N N6A FAD . . . B 2 2.5 31.506 9.542 1 4.2 ? N6A FAD 601 A 1 HETATM 19 N N1A FAD . . . B 2 4.807 31.459 9.493 1 2.1 ? N1A FAD 601 A 1 HETATM 20 C C2A FAD . . . B 2 5.975 32.111 9.536 1 4.78 ? C2A FAD 601 A 1 HETATM 21 N N3A FAD . . . B 2 6.205 33.416 9.676 1 5 ? N3A FAD 601 A 1 HETATM 22 C C4A FAD . . . B 2 5.041 34.086 9.764 1 4.65 ? C4A FAD 601 A 1 HETATM 23 N N1 FAD . . . B 2 5.638 33.491 4.796 1 2.78 ? N1 FAD 601 A 1 HETATM 24 C C2 FAD . . . B 2 6.694 34.006 4.143 1 3.3 ? C2 FAD 601 A 1 HETATM 25 O O2 FAD . . . B 2 7.254 35.01 4.565 1 4.2 ? O2 FAD 601 A 1 HETATM 26 N N3 FAD . . . B 2 7.243 33.409 3.045 1 2.24 ? N3 FAD 601 A 1 HETATM 27 C C4 FAD . . . B 2 6.671 32.301 2.468 1 4.09 ? C4 FAD 601 A 1 HETATM 28 O O4 FAD . . . B 2 7.195 31.791 1.474 1 2.3 ? O4 FAD 601 A 1 HETATM 29 C C4X FAD . . . B 2 5.497 31.793 3.075 1 1.81 ? C4X FAD 601 A 1 HETATM 30 N N5 FAD . . . B 2 4.918 30.761 2.54 1 2.04 ? N5 FAD 601 A 1 HETATM 31 C C5X FAD . . . B 2 3.749 30.326 3.093 1 2.36 ? C5X FAD 601 A 1 HETATM 32 C C6 FAD . . . B 2 3.089 29.244 2.482 1 2.36 ? C6 FAD 601 A 1 HETATM 33 C C7 FAD . . . B 2 1.927 28.739 3.007 1 1.49 ? C7 FAD 601 A 1 HETATM 34 C C7M FAD . . . B 2 1.218 27.583 2.344 1 2.68 ? C7M FAD 601 A 1 HETATM 35 C C8 FAD . . . B 2 1.368 29.345 4.17 1 3.56 ? C8 FAD 601 A 1 HETATM 36 C C8M FAD . . . B 2 0.085 28.832 4.754 1 2.65 ? C8M FAD 601 A 1 HETATM 37 C C9 FAD . . . B 2 2.041 30.365 4.803 1 2.31 ? C9 FAD 601 A 1 HETATM 38 C C9A FAD . . . B 2 3.22 30.891 4.269 1 0 ? C9A FAD 601 A 1 HETATM 39 N N10 FAD . . . B 2 3.897 31.956 4.855 1 0.92 ? N10 FAD 601 A 1 HETATM 40 C C10 FAD . . . B 2 5.037 32.453 4.268 1 0.98 ? C10 FAD 601 A 1 HETATM 41 C C1' FAD . . . B 2 3.449 32.466 6.172 1 1 ? C1' FAD 601 A 1 HETATM 42 C C2' FAD . . . B 2 2.49 33.61 6.212 1 0.47 ? C2' FAD 601 A 1 HETATM 43 O O2' FAD . . . B 2 1.333 33.281 5.475 1 1.57 ? O2' FAD 601 A 1 HETATM 44 C C3' FAD . . . B 2 3.14 34.9 5.712 1 2.66 ? C3' FAD 601 A 1 HETATM 45 O O3' FAD . . . B 2 4.298 35.181 6.49 1 2.61 ? O3' FAD 601 A 1 HETATM 46 C C4' FAD . . . B 2 2.215 36.08 5.942 1 2.38 ? C4' FAD 601 A 1 HETATM 47 O O4' FAD . . . B 2 1.027 35.929 5.163 1 3.39 ? O4' FAD 601 A 1 HETATM 48 C C5' FAD . . . B 2 2.944 37.361 5.624 1 2.03 ? C5' FAD 601 A 1 HETATM 49 O O5' FAD . . . B 2 1.967 38.394 5.608 1 4.64 ? O5' FAD 601 A 1 HETATM 50 P P FAD . . . B 2 2.13 39.583 6.653 1 73.96 ? P FAD 601 A 1 HETATM 51 O O1P FAD . . . B 2 3.504 40.044 6.502 1 8.03 ? O1P FAD 601 A 1 HETATM 52 O O2P FAD . . . B 2 1.03 40.567 6.49 1 10.48 ? O2P FAD 601 A 1 HETATM 53 O O3P FAD . . . B 2 2.134 38.839 8.06 1 6.92 ? O3P FAD 601 A 1 # _model_server_stats.io_time_ms 87 _model_server_stats.parse_time_ms 26 _model_server_stats.create_model_time_ms 19 _model_server_stats.query_time_ms 983 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 53 #