data_8C6U # _model_server_result.job_id wHtOtCjZ4JvI6oFE6ULa1A _model_server_result.datetime_utc '2024-11-24 03:22:21' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8c6u # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":605}' # _entry.id 8C6U # _exptl.entry_id 8C6U _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8C6U _cell.length_a 53.258 _cell.length_b 60.013 _cell.length_c 181.236 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8C6U _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 F N N ? 4 G N N ? 4 H N N ? 4 I N N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 89 n n C1 C2 EDO sing 90 n n C1 H11 EDO sing 91 n n C1 H12 EDO sing 92 n n O1 HO1 EDO sing 93 n n C2 O2 EDO sing 94 n n C2 H21 EDO sing 95 n n C2 H22 EDO sing 96 n n O2 HO2 EDO sing 97 n n # _atom_sites.entry_id 8C6U _atom_sites.fract_transf_matrix[1][1] 0.018777 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016663 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005518 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ACT A 1 601 1 ACT ACT . C 2 ACT A 1 602 2 ACT ACT . D 2 ACT A 1 603 3 ACT ACT . E 3 PEG A 1 604 1 PEG PEG . F 4 EDO A 1 605 1 EDO EDO . G 4 EDO A 1 606 2 EDO EDO . H 4 EDO A 1 607 3 EDO EDO . I 4 EDO A 1 608 4 EDO EDO . J 5 HOH A 1 701 257 HOH HOH . J 5 HOH A 2 702 13 HOH HOH . J 5 HOH A 3 703 152 HOH HOH . J 5 HOH A 4 704 154 HOH HOH . J 5 HOH A 5 705 267 HOH HOH . J 5 HOH A 6 706 145 HOH HOH . J 5 HOH A 7 707 66 HOH HOH . J 5 HOH A 8 708 56 HOH HOH . J 5 HOH A 9 709 47 HOH HOH . J 5 HOH A 10 710 44 HOH HOH . J 5 HOH A 11 711 110 HOH HOH . J 5 HOH A 12 712 114 HOH HOH . J 5 HOH A 13 713 34 HOH HOH . J 5 HOH A 14 714 144 HOH HOH . J 5 HOH A 15 715 147 HOH HOH . J 5 HOH A 16 716 35 HOH HOH . J 5 HOH A 17 717 96 HOH HOH . J 5 HOH A 18 718 140 HOH HOH . J 5 HOH A 19 719 8 HOH HOH . J 5 HOH A 20 720 21 HOH HOH . J 5 HOH A 21 721 180 HOH HOH . J 5 HOH A 22 722 46 HOH HOH . J 5 HOH A 23 723 187 HOH HOH . J 5 HOH A 24 724 220 HOH HOH . J 5 HOH A 25 725 87 HOH HOH . J 5 HOH A 26 726 91 HOH HOH . J 5 HOH A 27 727 99 HOH HOH . J 5 HOH A 28 728 128 HOH HOH . J 5 HOH A 29 729 117 HOH HOH . J 5 HOH A 30 730 88 HOH HOH . J 5 HOH A 31 731 15 HOH HOH . J 5 HOH A 32 732 107 HOH HOH . J 5 HOH A 33 733 7 HOH HOH . J 5 HOH A 34 734 100 HOH HOH . J 5 HOH A 35 735 30 HOH HOH . J 5 HOH A 36 736 155 HOH HOH . J 5 HOH A 37 737 42 HOH HOH . J 5 HOH A 38 738 170 HOH HOH . J 5 HOH A 39 739 136 HOH HOH . J 5 HOH A 40 740 60 HOH HOH . J 5 HOH A 41 741 51 HOH HOH . J 5 HOH A 42 742 69 HOH HOH . J 5 HOH A 43 743 45 HOH HOH . J 5 HOH A 44 744 190 HOH HOH . J 5 HOH A 45 745 70 HOH HOH . J 5 HOH A 46 746 201 HOH HOH . J 5 HOH A 47 747 238 HOH HOH . J 5 HOH A 48 748 3 HOH HOH . J 5 HOH A 49 749 208 HOH HOH . J 5 HOH A 50 750 183 HOH HOH . J 5 HOH A 51 751 19 HOH HOH . J 5 HOH A 52 752 1 HOH HOH . J 5 HOH A 53 753 143 HOH HOH . J 5 HOH A 54 754 33 HOH HOH . J 5 HOH A 55 755 129 HOH HOH . J 5 HOH A 56 756 118 HOH HOH . J 5 HOH A 57 757 81 HOH HOH . J 5 HOH A 58 758 67 HOH HOH . J 5 HOH A 59 759 2 HOH HOH . J 5 HOH A 60 760 84 HOH HOH . J 5 HOH A 61 761 50 HOH HOH . J 5 HOH A 62 762 55 HOH HOH . J 5 HOH A 63 763 156 HOH HOH . J 5 HOH A 64 764 82 HOH HOH . J 5 HOH A 65 765 9 HOH HOH . J 5 HOH A 66 766 38 HOH HOH . J 5 HOH A 67 767 169 HOH HOH . J 5 HOH A 68 768 105 HOH HOH . J 5 HOH A 69 769 4 HOH HOH . J 5 HOH A 70 770 151 HOH HOH . J 5 HOH A 71 771 68 HOH HOH . J 5 HOH A 72 772 65 HOH HOH . J 5 HOH A 73 773 95 HOH HOH . J 5 HOH A 74 774 5 HOH HOH . J 5 HOH A 75 775 229 HOH HOH . J 5 HOH A 76 776 182 HOH HOH . J 5 HOH A 77 777 97 HOH HOH . J 5 HOH A 78 778 239 HOH HOH . J 5 HOH A 79 779 93 HOH HOH . J 5 HOH A 80 780 142 HOH HOH . J 5 HOH A 81 781 122 HOH HOH . J 5 HOH A 82 782 188 HOH HOH . J 5 HOH A 83 783 259 HOH HOH . J 5 HOH A 84 784 135 HOH HOH . J 5 HOH A 85 785 41 HOH HOH . J 5 HOH A 86 786 113 HOH HOH . J 5 HOH A 87 787 12 HOH HOH . J 5 HOH A 88 788 23 HOH HOH . J 5 HOH A 89 789 216 HOH HOH . J 5 HOH A 90 790 62 HOH HOH . J 5 HOH A 91 791 104 HOH HOH . J 5 HOH A 92 792 111 HOH HOH . J 5 HOH A 93 793 6 HOH HOH . J 5 HOH A 94 794 139 HOH HOH . J 5 HOH A 95 795 77 HOH HOH . J 5 HOH A 96 796 28 HOH HOH . J 5 HOH A 97 797 223 HOH HOH . J 5 HOH A 98 798 59 HOH HOH . J 5 HOH A 99 799 150 HOH HOH . J 5 HOH A 100 800 230 HOH HOH . J 5 HOH A 101 801 194 HOH HOH . J 5 HOH A 102 802 137 HOH HOH . J 5 HOH A 103 803 120 HOH HOH . J 5 HOH A 104 804 79 HOH HOH . J 5 HOH A 105 805 25 HOH HOH . J 5 HOH A 106 806 20 HOH HOH . J 5 HOH A 107 807 94 HOH HOH . J 5 HOH A 108 808 101 HOH HOH . J 5 HOH A 109 809 181 HOH HOH . J 5 HOH A 110 810 121 HOH HOH . J 5 HOH A 111 811 234 HOH HOH . J 5 HOH A 112 812 185 HOH HOH . J 5 HOH A 113 813 173 HOH HOH . J 5 HOH A 114 814 210 HOH HOH . J 5 HOH A 115 815 232 HOH HOH . J 5 HOH A 116 816 217 HOH HOH . J 5 HOH A 117 817 268 HOH HOH . J 5 HOH A 118 818 58 HOH HOH . J 5 HOH A 119 819 83 HOH HOH . J 5 HOH A 120 820 17 HOH HOH . J 5 HOH A 121 821 54 HOH HOH . J 5 HOH A 122 822 192 HOH HOH . J 5 HOH A 123 823 43 HOH HOH . J 5 HOH A 124 824 64 HOH HOH . J 5 HOH A 125 825 49 HOH HOH . J 5 HOH A 126 826 174 HOH HOH . J 5 HOH A 127 827 195 HOH HOH . J 5 HOH A 128 828 200 HOH HOH . J 5 HOH A 129 829 14 HOH HOH . J 5 HOH A 130 830 127 HOH HOH . J 5 HOH A 131 831 36 HOH HOH . J 5 HOH A 132 832 160 HOH HOH . J 5 HOH A 133 833 26 HOH HOH . J 5 HOH A 134 834 146 HOH HOH . J 5 HOH A 135 835 124 HOH HOH . J 5 HOH A 136 836 134 HOH HOH . J 5 HOH A 137 837 39 HOH HOH . J 5 HOH A 138 838 186 HOH HOH . J 5 HOH A 139 839 153 HOH HOH . J 5 HOH A 140 840 178 HOH HOH . J 5 HOH A 141 841 266 HOH HOH . J 5 HOH A 142 842 78 HOH HOH . J 5 HOH A 143 843 209 HOH HOH . J 5 HOH A 144 844 131 HOH HOH . J 5 HOH A 145 845 72 HOH HOH . J 5 HOH A 146 846 48 HOH HOH . J 5 HOH A 147 847 90 HOH HOH . J 5 HOH A 148 848 116 HOH HOH . J 5 HOH A 149 849 75 HOH HOH . J 5 HOH A 150 850 18 HOH HOH . J 5 HOH A 151 851 40 HOH HOH . J 5 HOH A 152 852 76 HOH HOH . J 5 HOH A 153 853 27 HOH HOH . J 5 HOH A 154 854 166 HOH HOH . J 5 HOH A 155 855 157 HOH HOH . J 5 HOH A 156 856 177 HOH HOH . J 5 HOH A 157 857 31 HOH HOH . J 5 HOH A 158 858 37 HOH HOH . J 5 HOH A 159 859 227 HOH HOH . J 5 HOH A 160 860 92 HOH HOH . J 5 HOH A 161 861 89 HOH HOH . J 5 HOH A 162 862 133 HOH HOH . J 5 HOH A 163 863 214 HOH HOH . J 5 HOH A 164 864 24 HOH HOH . J 5 HOH A 165 865 165 HOH HOH . J 5 HOH A 166 866 264 HOH HOH . J 5 HOH A 167 867 125 HOH HOH . J 5 HOH A 168 868 184 HOH HOH . J 5 HOH A 169 869 103 HOH HOH . J 5 HOH A 170 870 213 HOH HOH . J 5 HOH A 171 871 172 HOH HOH . J 5 HOH A 172 872 164 HOH HOH . J 5 HOH A 173 873 219 HOH HOH . J 5 HOH A 174 874 138 HOH HOH . J 5 HOH A 175 875 123 HOH HOH . J 5 HOH A 176 876 158 HOH HOH . J 5 HOH A 177 877 203 HOH HOH . J 5 HOH A 178 878 32 HOH HOH . J 5 HOH A 179 879 253 HOH HOH . J 5 HOH A 180 880 211 HOH HOH . J 5 HOH A 181 881 16 HOH HOH . J 5 HOH A 182 882 126 HOH HOH . J 5 HOH A 183 883 85 HOH HOH . J 5 HOH A 184 884 112 HOH HOH . J 5 HOH A 185 885 115 HOH HOH . J 5 HOH A 186 886 74 HOH HOH . J 5 HOH A 187 887 106 HOH HOH . J 5 HOH A 188 888 102 HOH HOH . J 5 HOH A 189 889 61 HOH HOH . J 5 HOH A 190 890 161 HOH HOH . J 5 HOH A 191 891 202 HOH HOH . J 5 HOH A 192 892 231 HOH HOH . J 5 HOH A 193 893 179 HOH HOH . J 5 HOH A 194 894 196 HOH HOH . J 5 HOH A 195 895 207 HOH HOH . J 5 HOH A 196 896 132 HOH HOH . J 5 HOH A 197 897 225 HOH HOH . J 5 HOH A 198 898 224 HOH HOH . J 5 HOH A 199 899 29 HOH HOH . J 5 HOH A 200 900 193 HOH HOH . J 5 HOH A 201 901 212 HOH HOH . J 5 HOH A 202 902 189 HOH HOH . J 5 HOH A 203 903 191 HOH HOH . J 5 HOH A 204 904 199 HOH HOH . J 5 HOH A 205 905 119 HOH HOH . J 5 HOH A 206 906 159 HOH HOH . J 5 HOH A 207 907 204 HOH HOH . J 5 HOH A 208 908 73 HOH HOH . J 5 HOH A 209 909 52 HOH HOH . J 5 HOH A 210 910 53 HOH HOH . J 5 HOH A 211 911 176 HOH HOH . J 5 HOH A 212 912 108 HOH HOH . J 5 HOH A 213 913 63 HOH HOH . J 5 HOH A 214 914 206 HOH HOH . J 5 HOH A 215 915 215 HOH HOH . J 5 HOH A 216 916 71 HOH HOH . J 5 HOH A 217 917 256 HOH HOH . J 5 HOH A 218 918 163 HOH HOH . J 5 HOH A 219 919 244 HOH HOH . J 5 HOH A 220 920 263 HOH HOH . J 5 HOH A 221 921 148 HOH HOH . J 5 HOH A 222 922 98 HOH HOH . J 5 HOH A 223 923 171 HOH HOH . J 5 HOH A 224 924 226 HOH HOH . J 5 HOH A 225 925 130 HOH HOH . J 5 HOH A 226 926 221 HOH HOH . J 5 HOH A 227 927 218 HOH HOH . J 5 HOH A 228 928 248 HOH HOH . J 5 HOH A 229 929 247 HOH HOH . J 5 HOH A 230 930 228 HOH HOH . J 5 HOH A 231 931 162 HOH HOH . J 5 HOH A 232 932 175 HOH HOH . J 5 HOH A 233 933 86 HOH HOH . J 5 HOH A 234 934 236 HOH HOH . J 5 HOH A 235 935 80 HOH HOH . J 5 HOH A 236 936 205 HOH HOH . J 5 HOH A 237 937 141 HOH HOH . J 5 HOH A 238 938 254 HOH HOH . J 5 HOH A 239 939 233 HOH HOH . J 5 HOH A 240 940 246 HOH HOH . J 5 HOH A 241 941 222 HOH HOH . J 5 HOH A 242 942 235 HOH HOH . J 5 HOH A 243 943 198 HOH HOH . J 5 HOH A 244 944 250 HOH HOH . J 5 HOH A 245 945 197 HOH HOH . J 5 HOH A 246 946 258 HOH HOH . J 5 HOH A 247 947 265 HOH HOH . J 5 HOH A 248 948 242 HOH HOH . J 5 HOH A 249 949 260 HOH HOH . J 5 HOH A 250 950 243 HOH HOH . J 5 HOH A 251 951 240 HOH HOH . J 5 HOH A 252 952 241 HOH HOH . J 5 HOH A 253 953 249 HOH HOH . J 5 HOH A 254 954 245 HOH HOH . J 5 HOH A 255 955 237 HOH HOH . J 5 HOH A 256 956 252 HOH HOH . J 5 HOH A 257 957 262 HOH HOH . J 5 HOH A 258 958 261 HOH HOH . J 5 HOH A 259 959 251 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . F 4 17.843 25.211 -42.319 1 61.09 ? C1 EDO 605 A 1 HETATM 2 O O1 EDO . . . F 4 18.852 24.447 -42.959 1 61.05 ? O1 EDO 605 A 1 HETATM 3 C C2 EDO . . . F 4 16.726 24.307 -41.854 1 61.05 ? C2 EDO 605 A 1 HETATM 4 O O2 EDO . . . F 4 15.946 24.952 -40.857 1 61.1 ? O2 EDO 605 A 1 HETATM 5 H H11 EDO . . . F 4 17.47 25.956 -43.027 1 61.09 ? H11 EDO 605 A 1 HETATM 6 H H12 EDO . . . F 4 18.305 25.714 -41.466 1 61.09 ? H12 EDO 605 A 1 HETATM 7 H HO1 EDO . . . F 4 19.446 25.077 -43.401 1 61.05 ? HO1 EDO 605 A 1 HETATM 8 H H21 EDO . . . F 4 17.137 23.397 -41.412 1 61.05 ? H21 EDO 605 A 1 HETATM 9 H H22 EDO . . . F 4 16.068 24.046 -42.688 1 61.05 ? H22 EDO 605 A 1 HETATM 10 H HO2 EDO . . . F 4 15.329 24.288 -40.507 1 61.09 ? HO2 EDO 605 A 1 # _model_server_stats.io_time_ms 34 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 23 _model_server_stats.query_time_ms 316 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 10 #