data_8C6Y # _model_server_result.job_id ZGkspCZd5ob5AFRssuVhMw _model_server_result.datetime_utc '2024-11-02 04:30:53' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8c6y # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":601}' # _entry.id 8C6Y # _exptl.entry_id 8C6Y _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8C6Y _cell.length_a 47.878 _cell.length_b 58.889 _cell.length_c 177.793 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8C6Y _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 8C6Y _atom_sites.fract_transf_matrix[1][1] 0.020886 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016981 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005625 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EDO A 1 601 1 EDO EDO . C 3 HOH A 1 701 48 HOH HOH . C 3 HOH A 2 702 146 HOH HOH . C 3 HOH A 3 703 128 HOH HOH . C 3 HOH A 4 704 191 HOH HOH . C 3 HOH A 5 705 111 HOH HOH . C 3 HOH A 6 706 312 HOH HOH . C 3 HOH A 7 707 56 HOH HOH . C 3 HOH A 8 708 228 HOH HOH . C 3 HOH A 9 709 16 HOH HOH . C 3 HOH A 10 710 14 HOH HOH . C 3 HOH A 11 711 46 HOH HOH . C 3 HOH A 12 712 205 HOH HOH . C 3 HOH A 13 713 58 HOH HOH . C 3 HOH A 14 714 3 HOH HOH . C 3 HOH A 15 715 214 HOH HOH . C 3 HOH A 16 716 29 HOH HOH . C 3 HOH A 17 717 113 HOH HOH . C 3 HOH A 18 718 36 HOH HOH . C 3 HOH A 19 719 105 HOH HOH . C 3 HOH A 20 720 276 HOH HOH . C 3 HOH A 21 721 182 HOH HOH . C 3 HOH A 22 722 211 HOH HOH . C 3 HOH A 23 723 88 HOH HOH . C 3 HOH A 24 724 75 HOH HOH . C 3 HOH A 25 725 189 HOH HOH . C 3 HOH A 26 726 104 HOH HOH . C 3 HOH A 27 727 270 HOH HOH . C 3 HOH A 28 728 69 HOH HOH . C 3 HOH A 29 729 8 HOH HOH . C 3 HOH A 30 730 223 HOH HOH . C 3 HOH A 31 731 92 HOH HOH . C 3 HOH A 32 732 297 HOH HOH . C 3 HOH A 33 733 15 HOH HOH . C 3 HOH A 34 734 65 HOH HOH . C 3 HOH A 35 735 187 HOH HOH . C 3 HOH A 36 736 10 HOH HOH . C 3 HOH A 37 737 44 HOH HOH . C 3 HOH A 38 738 30 HOH HOH . C 3 HOH A 39 739 22 HOH HOH . C 3 HOH A 40 740 23 HOH HOH . C 3 HOH A 41 741 19 HOH HOH . C 3 HOH A 42 742 193 HOH HOH . C 3 HOH A 43 743 80 HOH HOH . C 3 HOH A 44 744 237 HOH HOH . C 3 HOH A 45 745 55 HOH HOH . C 3 HOH A 46 746 107 HOH HOH . C 3 HOH A 47 747 175 HOH HOH . C 3 HOH A 48 748 253 HOH HOH . C 3 HOH A 49 749 178 HOH HOH . C 3 HOH A 50 750 62 HOH HOH . C 3 HOH A 51 751 190 HOH HOH . C 3 HOH A 52 752 2 HOH HOH . C 3 HOH A 53 753 303 HOH HOH . C 3 HOH A 54 754 11 HOH HOH . C 3 HOH A 55 755 127 HOH HOH . C 3 HOH A 56 756 154 HOH HOH . C 3 HOH A 57 757 71 HOH HOH . C 3 HOH A 58 758 200 HOH HOH . C 3 HOH A 59 759 171 HOH HOH . C 3 HOH A 60 760 76 HOH HOH . C 3 HOH A 61 761 5 HOH HOH . C 3 HOH A 62 762 158 HOH HOH . C 3 HOH A 63 763 89 HOH HOH . C 3 HOH A 64 764 24 HOH HOH . C 3 HOH A 65 765 225 HOH HOH . C 3 HOH A 66 766 34 HOH HOH . C 3 HOH A 67 767 161 HOH HOH . C 3 HOH A 68 768 72 HOH HOH . C 3 HOH A 69 769 6 HOH HOH . C 3 HOH A 70 770 73 HOH HOH . C 3 HOH A 71 771 268 HOH HOH . C 3 HOH A 72 772 20 HOH HOH . C 3 HOH A 73 773 248 HOH HOH . C 3 HOH A 74 774 45 HOH HOH . C 3 HOH A 75 775 117 HOH HOH . C 3 HOH A 76 776 4 HOH HOH . C 3 HOH A 77 777 122 HOH HOH . C 3 HOH A 78 778 160 HOH HOH . C 3 HOH A 79 779 78 HOH HOH . C 3 HOH A 80 780 124 HOH HOH . C 3 HOH A 81 781 184 HOH HOH . C 3 HOH A 82 782 210 HOH HOH . C 3 HOH A 83 783 203 HOH HOH . C 3 HOH A 84 784 79 HOH HOH . C 3 HOH A 85 785 241 HOH HOH . C 3 HOH A 86 786 119 HOH HOH . C 3 HOH A 87 787 218 HOH HOH . C 3 HOH A 88 788 97 HOH HOH . C 3 HOH A 89 789 285 HOH HOH . C 3 HOH A 90 790 267 HOH HOH . C 3 HOH A 91 791 274 HOH HOH . C 3 HOH A 92 792 35 HOH HOH . C 3 HOH A 93 793 147 HOH HOH . C 3 HOH A 94 794 202 HOH HOH . C 3 HOH A 95 795 95 HOH HOH . C 3 HOH A 96 796 138 HOH HOH . C 3 HOH A 97 797 166 HOH HOH . C 3 HOH A 98 798 277 HOH HOH . C 3 HOH A 99 799 7 HOH HOH . C 3 HOH A 100 800 136 HOH HOH . C 3 HOH A 101 801 9 HOH HOH . C 3 HOH A 102 802 66 HOH HOH . C 3 HOH A 103 803 17 HOH HOH . C 3 HOH A 104 804 33 HOH HOH . C 3 HOH A 105 805 81 HOH HOH . C 3 HOH A 106 806 60 HOH HOH . C 3 HOH A 107 807 281 HOH HOH . C 3 HOH A 108 808 173 HOH HOH . C 3 HOH A 109 809 199 HOH HOH . C 3 HOH A 110 810 40 HOH HOH . C 3 HOH A 111 811 207 HOH HOH . C 3 HOH A 112 812 169 HOH HOH . C 3 HOH A 113 813 162 HOH HOH . C 3 HOH A 114 814 47 HOH HOH . C 3 HOH A 115 815 112 HOH HOH . C 3 HOH A 116 816 251 HOH HOH . C 3 HOH A 117 817 39 HOH HOH . C 3 HOH A 118 818 145 HOH HOH . C 3 HOH A 119 819 106 HOH HOH . C 3 HOH A 120 820 216 HOH HOH . C 3 HOH A 121 821 74 HOH HOH . C 3 HOH A 122 822 59 HOH HOH . C 3 HOH A 123 823 1 HOH HOH . C 3 HOH A 124 824 192 HOH HOH . C 3 HOH A 125 825 153 HOH HOH . C 3 HOH A 126 826 67 HOH HOH . C 3 HOH A 127 827 86 HOH HOH . C 3 HOH A 128 828 64 HOH HOH . C 3 HOH A 129 829 28 HOH HOH . C 3 HOH A 130 830 172 HOH HOH . C 3 HOH A 131 831 194 HOH HOH . C 3 HOH A 132 832 87 HOH HOH . C 3 HOH A 133 833 102 HOH HOH . C 3 HOH A 134 834 93 HOH HOH . C 3 HOH A 135 835 163 HOH HOH . C 3 HOH A 136 836 41 HOH HOH . C 3 HOH A 137 837 165 HOH HOH . C 3 HOH A 138 838 70 HOH HOH . C 3 HOH A 139 839 196 HOH HOH . C 3 HOH A 140 840 219 HOH HOH . C 3 HOH A 141 841 185 HOH HOH . C 3 HOH A 142 842 27 HOH HOH . C 3 HOH A 143 843 231 HOH HOH . C 3 HOH A 144 844 108 HOH HOH . C 3 HOH A 145 845 32 HOH HOH . C 3 HOH A 146 846 152 HOH HOH . C 3 HOH A 147 847 295 HOH HOH . C 3 HOH A 148 848 12 HOH HOH . C 3 HOH A 149 849 148 HOH HOH . C 3 HOH A 150 850 296 HOH HOH . C 3 HOH A 151 851 61 HOH HOH . C 3 HOH A 152 852 114 HOH HOH . C 3 HOH A 153 853 286 HOH HOH . C 3 HOH A 154 854 209 HOH HOH . C 3 HOH A 155 855 293 HOH HOH . C 3 HOH A 156 856 42 HOH HOH . C 3 HOH A 157 857 98 HOH HOH . C 3 HOH A 158 858 21 HOH HOH . C 3 HOH A 159 859 155 HOH HOH . C 3 HOH A 160 860 198 HOH HOH . C 3 HOH A 161 861 230 HOH HOH . C 3 HOH A 162 862 298 HOH HOH . C 3 HOH A 163 863 168 HOH HOH . C 3 HOH A 164 864 140 HOH HOH . C 3 HOH A 165 865 144 HOH HOH . C 3 HOH A 166 866 261 HOH HOH . C 3 HOH A 167 867 217 HOH HOH . C 3 HOH A 168 868 247 HOH HOH . C 3 HOH A 169 869 82 HOH HOH . C 3 HOH A 170 870 130 HOH HOH . C 3 HOH A 171 871 254 HOH HOH . C 3 HOH A 172 872 306 HOH HOH . C 3 HOH A 173 873 135 HOH HOH . C 3 HOH A 174 874 316 HOH HOH . C 3 HOH A 175 875 31 HOH HOH . C 3 HOH A 176 876 142 HOH HOH . C 3 HOH A 177 877 206 HOH HOH . C 3 HOH A 178 878 126 HOH HOH . C 3 HOH A 179 879 226 HOH HOH . C 3 HOH A 180 880 176 HOH HOH . C 3 HOH A 181 881 132 HOH HOH . C 3 HOH A 182 882 90 HOH HOH . C 3 HOH A 183 883 43 HOH HOH . C 3 HOH A 184 884 125 HOH HOH . C 3 HOH A 185 885 91 HOH HOH . C 3 HOH A 186 886 101 HOH HOH . C 3 HOH A 187 887 63 HOH HOH . C 3 HOH A 188 888 94 HOH HOH . C 3 HOH A 189 889 264 HOH HOH . C 3 HOH A 190 890 100 HOH HOH . C 3 HOH A 191 891 134 HOH HOH . C 3 HOH A 192 892 310 HOH HOH . C 3 HOH A 193 893 118 HOH HOH . C 3 HOH A 194 894 213 HOH HOH . C 3 HOH A 195 895 181 HOH HOH . C 3 HOH A 196 896 255 HOH HOH . C 3 HOH A 197 897 279 HOH HOH . C 3 HOH A 198 898 77 HOH HOH . C 3 HOH A 199 899 150 HOH HOH . C 3 HOH A 200 900 259 HOH HOH . C 3 HOH A 201 901 18 HOH HOH . C 3 HOH A 202 902 164 HOH HOH . C 3 HOH A 203 903 38 HOH HOH . C 3 HOH A 204 904 159 HOH HOH . C 3 HOH A 205 905 110 HOH HOH . C 3 HOH A 206 906 137 HOH HOH . C 3 HOH A 207 907 84 HOH HOH . C 3 HOH A 208 908 133 HOH HOH . C 3 HOH A 209 909 26 HOH HOH . C 3 HOH A 210 910 188 HOH HOH . C 3 HOH A 211 911 271 HOH HOH . C 3 HOH A 212 912 322 HOH HOH . C 3 HOH A 213 913 222 HOH HOH . C 3 HOH A 214 914 131 HOH HOH . C 3 HOH A 215 915 68 HOH HOH . C 3 HOH A 216 916 224 HOH HOH . C 3 HOH A 217 917 120 HOH HOH . C 3 HOH A 218 918 156 HOH HOH . C 3 HOH A 219 919 220 HOH HOH . C 3 HOH A 220 920 96 HOH HOH . C 3 HOH A 221 921 13 HOH HOH . C 3 HOH A 222 922 109 HOH HOH . C 3 HOH A 223 923 180 HOH HOH . C 3 HOH A 224 924 300 HOH HOH . C 3 HOH A 225 925 331 HOH HOH . C 3 HOH A 226 926 242 HOH HOH . C 3 HOH A 227 927 304 HOH HOH . C 3 HOH A 228 928 103 HOH HOH . C 3 HOH A 229 929 129 HOH HOH . C 3 HOH A 230 930 256 HOH HOH . C 3 HOH A 231 931 335 HOH HOH . C 3 HOH A 232 932 141 HOH HOH . C 3 HOH A 233 933 54 HOH HOH . C 3 HOH A 234 934 204 HOH HOH . C 3 HOH A 235 935 275 HOH HOH . C 3 HOH A 236 936 221 HOH HOH . C 3 HOH A 237 937 212 HOH HOH . C 3 HOH A 238 938 197 HOH HOH . C 3 HOH A 239 939 99 HOH HOH . C 3 HOH A 240 940 289 HOH HOH . C 3 HOH A 241 941 25 HOH HOH . C 3 HOH A 242 942 288 HOH HOH . C 3 HOH A 243 943 292 HOH HOH . C 3 HOH A 244 944 245 HOH HOH . C 3 HOH A 245 945 149 HOH HOH . C 3 HOH A 246 946 232 HOH HOH . C 3 HOH A 247 947 278 HOH HOH . C 3 HOH A 248 948 121 HOH HOH . C 3 HOH A 249 949 249 HOH HOH . C 3 HOH A 250 950 299 HOH HOH . C 3 HOH A 251 951 334 HOH HOH . C 3 HOH A 252 952 179 HOH HOH . C 3 HOH A 253 953 307 HOH HOH . C 3 HOH A 254 954 262 HOH HOH . C 3 HOH A 255 955 229 HOH HOH . C 3 HOH A 256 956 260 HOH HOH . C 3 HOH A 257 957 233 HOH HOH . C 3 HOH A 258 958 308 HOH HOH . C 3 HOH A 259 959 157 HOH HOH . C 3 HOH A 260 960 326 HOH HOH . C 3 HOH A 261 961 305 HOH HOH . C 3 HOH A 262 962 325 HOH HOH . C 3 HOH A 263 963 336 HOH HOH . C 3 HOH A 264 964 143 HOH HOH . C 3 HOH A 265 965 85 HOH HOH . C 3 HOH A 266 966 57 HOH HOH . C 3 HOH A 267 967 215 HOH HOH . C 3 HOH A 268 968 309 HOH HOH . C 3 HOH A 269 969 311 HOH HOH . C 3 HOH A 270 970 183 HOH HOH . C 3 HOH A 271 971 323 HOH HOH . C 3 HOH A 272 972 287 HOH HOH . C 3 HOH A 273 973 257 HOH HOH . C 3 HOH A 274 974 250 HOH HOH . C 3 HOH A 275 975 321 HOH HOH . C 3 HOH A 276 976 324 HOH HOH . C 3 HOH A 277 977 116 HOH HOH . C 3 HOH A 278 978 317 HOH HOH . C 3 HOH A 279 979 290 HOH HOH . C 3 HOH A 280 980 177 HOH HOH . C 3 HOH A 281 981 319 HOH HOH . C 3 HOH A 282 982 328 HOH HOH . C 3 HOH A 283 983 318 HOH HOH . C 3 HOH A 284 984 170 HOH HOH . C 3 HOH A 285 985 330 HOH HOH . C 3 HOH A 286 986 49 HOH HOH . C 3 HOH A 287 987 37 HOH HOH . C 3 HOH A 288 988 329 HOH HOH . C 3 HOH A 289 989 327 HOH HOH . C 3 HOH A 290 990 235 HOH HOH . C 3 HOH A 291 991 332 HOH HOH . C 3 HOH A 292 992 50 HOH HOH . C 3 HOH A 293 993 320 HOH HOH . C 3 HOH A 294 994 337 HOH HOH . C 3 HOH A 295 995 52 HOH HOH . C 3 HOH A 296 996 333 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . B 2 -24.92 -9.656 -14.306 1 37.86 ? C1 EDO 601 A 1 HETATM 2 O O1 EDO . . . B 2 -24.628 -8.272 -14.457 1 37.84 ? O1 EDO 601 A 1 HETATM 3 C C2 EDO . . . B 2 -26.389 -9.91 -14.551 1 37.96 ? C2 EDO 601 A 1 HETATM 4 O O2 EDO . . . B 2 -26.635 -11.306 -14.608 1 38.2 ? O2 EDO 601 A 1 HETATM 5 H H11 EDO . . . B 2 -24.636 -9.962 -13.297 1 37.86 ? H11 EDO 601 A 1 HETATM 6 H H12 EDO . . . B 2 -24.317 -10.203 -15.036 1 37.86 ? H12 EDO 601 A 1 HETATM 7 H HO1 EDO . . . B 2 -23.734 -8.13 -14.101 1 37.84 ? HO1 EDO 601 A 1 HETATM 8 H H21 EDO . . . B 2 -26.695 -9.482 -15.508 1 37.96 ? H21 EDO 601 A 1 HETATM 9 H H22 EDO . . . B 2 -26.997 -9.486 -13.749 1 37.96 ? H22 EDO 601 A 1 HETATM 10 H HO2 EDO . . . B 2 -26.454 -11.665 -13.723 1 38.2 ? HO2 EDO 601 A 1 # _model_server_stats.io_time_ms 63 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 343 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 10 #