data_8C81
#
_model_server_result.job_id            u2h-ppYAN1h5OEPzlvo0RA 
_model_server_result.datetime_utc      '2025-02-05 19:09:32' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8c81 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"J","auth_seq_id":602}' 
#
_entry.id    8C81 
#
_exptl.entry_id    8C81 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              396.648 
_entity.id                          6 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            ERGOSTEROL 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    pentameric 
_pdbx_struct_assembly.oligomeric_count      5 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 6 F N N 
? 6 I N N 
? 6 J N N 
#
_struct_conn.conn_type_id                   covale 
_struct_conn.details                        ? 
_struct_conn.id                             covale1 
_struct_conn.ptnr1_label_asym_id            C 
_struct_conn.ptnr1_label_atom_id            NZ 
_struct_conn.ptnr1_label_comp_id            LYS 
_struct_conn.ptnr1_label_seq_id             366 
_struct_conn.ptnr1_auth_asym_id             C 
_struct_conn.ptnr1_auth_comp_id             LYS 
_struct_conn.ptnr1_auth_seq_id              366 
_struct_conn.ptnr1_symmetry                 1_555 
_struct_conn.ptnr2_label_asym_id            K 
_struct_conn.ptnr2_label_atom_id            C4A 
_struct_conn.ptnr2_label_comp_id            PLP 
_struct_conn.ptnr2_label_seq_id             . 
_struct_conn.ptnr2_auth_asym_id             C 
_struct_conn.ptnr2_auth_comp_id             PLP 
_struct_conn.ptnr2_auth_seq_id              601 
_struct_conn.ptnr2_symmetry                 1_555 
_struct_conn.pdbx_ptnr1_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr1_label_alt_id        ? 
_struct_conn.pdbx_ptnr1_standard_comp_id    ? 
_struct_conn.pdbx_ptnr2_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr2_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr3_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_label_asym_id       ? 
_struct_conn.pdbx_ptnr3_label_atom_id       ? 
_struct_conn.pdbx_ptnr3_label_comp_id       ? 
_struct_conn.pdbx_ptnr3_label_seq_id        ? 
_struct_conn.pdbx_PDB_id                    ? 
_struct_conn.pdbx_dist_value                1.43 
_struct_conn.pdbx_value_order               ? 
#
_chem_comp.formula           'C28 H44 O' 
_chem_comp.formula_weight    396.648 
_chem_comp.id                ERG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              ERGOSTEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 ERG sing 83 n n 
C1 C10 ERG sing 84 n n 
C1 H11 ERG sing 85 n n 
C1 H12 ERG sing 86 n n 
C2 C3 ERG sing 87 n n 
C2 H21 ERG sing 88 n n 
C2 H22A ERG sing 89 n n 
C3 C4 ERG sing 90 n n 
C3 O1 ERG sing 91 n n 
C3 H3 ERG sing 92 n n 
C4 C5 ERG sing 93 n n 
C4 H41 ERG sing 94 n n 
C4 H42 ERG sing 95 n n 
C5 C6 ERG doub 96 n n 
C5 C10 ERG sing 97 n n 
C6 C7 ERG sing 98 n n 
C6 H6 ERG sing 99 n n 
C7 C8 ERG doub 100 n n 
C7 H7 ERG sing 101 n n 
C8 C9 ERG sing 102 n n 
C8 C14 ERG sing 103 n n 
C9 C10 ERG sing 104 n n 
C9 C11 ERG sing 105 n n 
C9 H9 ERG sing 106 n n 
C10 C19 ERG sing 107 n n 
C11 C12 ERG sing 108 n n 
C11 H111 ERG sing 109 n n 
C11 H112 ERG sing 110 n n 
C12 C13 ERG sing 111 n n 
C12 H121 ERG sing 112 n n 
C12 H122 ERG sing 113 n n 
C13 C14 ERG sing 114 n n 
C13 C17 ERG sing 115 n n 
C13 C18 ERG sing 116 n n 
C14 C15 ERG sing 117 n n 
C14 H14 ERG sing 118 n n 
C15 C16 ERG sing 119 n n 
C15 H151 ERG sing 120 n n 
C15 H152 ERG sing 121 n n 
C16 C17 ERG sing 122 n n 
C16 H161 ERG sing 123 n n 
C16 H162 ERG sing 124 n n 
C17 C20 ERG sing 125 n n 
C17 H17 ERG sing 126 n n 
C18 H181 ERG sing 127 n n 
C18 H182 ERG sing 128 n n 
C18 H183 ERG sing 129 n n 
C19 H191 ERG sing 130 n n 
C19 H192 ERG sing 131 n n 
C19 H193 ERG sing 132 n n 
C20 C21 ERG sing 133 n n 
C20 C22 ERG sing 134 n n 
C20 H20 ERG sing 135 n n 
C21 H211 ERG sing 136 n n 
C21 H212 ERG sing 137 n n 
C21 H213 ERG sing 138 n n 
C22 C23 ERG doub 139 e n 
C22 H22 ERG sing 140 n n 
C23 C24 ERG sing 141 n n 
C23 H23 ERG sing 142 n n 
C24 C25 ERG sing 143 n n 
C24 C28 ERG sing 144 n n 
C24 H24 ERG sing 145 n n 
C25 C26 ERG sing 146 n n 
C25 C27 ERG sing 147 n n 
C25 H25 ERG sing 148 n n 
C26 H261 ERG sing 149 n n 
C26 H262 ERG sing 150 n n 
C26 H263 ERG sing 151 n n 
C27 H271 ERG sing 152 n n 
C27 H272 ERG sing 153 n n 
C27 H273 ERG sing 154 n n 
C28 H281 ERG sing 155 n n 
C28 H282 ERG sing 156 n n 
C28 H283 ERG sing 157 n n 
O1 HO1 ERG sing 158 n n 
#
_atom_sites.entry_id                     8C81 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
F 6 ERG A 1 301 301 ERG ERG . 
G 7 Z8A A 1 302 302 Z8A Z8A . 
H 8 Q7G A 1 303 303 Q7G Q7G . 
I 6 ERG B 1 601 601 ERG ERG . 
J 6 ERG B 1 602 602 ERG ERG . 
K 9 PLP C 1 601 601 PLP PLP . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 ERG . . . J 6 216.206 164.322 197.882 1 116.45 ? C1 ERG 602 B 1 
HETATM 2 C C2 ERG . . . J 6 216.282 163.649 196.489 1 116.45 ? C2 ERG 602 B 1 
HETATM 3 C C3 ERG . . . J 6 216.173 162.119 196.67 1 116.45 ? C3 ERG 602 B 1 
HETATM 4 C C4 ERG . . . J 6 214.809 161.774 197.289 1 116.45 ? C4 ERG 602 B 1 
HETATM 5 C C5 ERG . . . J 6 214.603 162.497 198.612 1 116.45 ? C5 ERG 602 B 1 
HETATM 6 C C6 ERG . . . J 6 214.178 161.821 199.665 1 116.45 ? C6 ERG 602 B 1 
HETATM 7 C C7 ERG . . . J 6 213.964 162.419 200.97 1 116.45 ? C7 ERG 602 B 1 
HETATM 8 C C8 ERG . . . J 6 214.348 163.648 201.269 1 116.45 ? C8 ERG 602 B 1 
HETATM 9 C C9 ERG . . . J 6 215.053 164.509 200.209 1 116.45 ? C9 ERG 602 B 1 
HETATM 10 C C10 ERG . . . J 6 214.903 164.011 198.674 1 116.45 ? C10 ERG 602 B 1 
HETATM 11 C C11 ERG . . . J 6 214.852 166.033 200.416 1 116.45 ? C11 ERG 602 B 1 
HETATM 12 C C12 ERG . . . J 6 214.867 166.5 201.89 1 116.45 ? C12 ERG 602 B 1 
HETATM 13 C C13 ERG . . . J 6 213.796 165.796 202.747 1 116.45 ? C13 ERG 602 B 1 
HETATM 14 C C14 ERG . . . J 6 214.146 164.286 202.65 1 116.45 ? C14 ERG 602 B 1 
HETATM 15 C C15 ERG . . . J 6 213.275 163.642 203.75 1 116.45 ? C15 ERG 602 B 1 
HETATM 16 C C16 ERG . . . J 6 213.214 164.722 204.871 1 116.45 ? C16 ERG 602 B 1 
HETATM 17 C C17 ERG . . . J 6 213.902 166.007 204.33 1 116.45 ? C17 ERG 602 B 1 
HETATM 18 C C18 ERG . . . J 6 212.39 166.113 202.239 1 116.45 ? C18 ERG 602 B 1 
HETATM 19 C C19 ERG . . . J 6 213.776 164.796 197.992 1 116.45 ? C19 ERG 602 B 1 
HETATM 20 C C20 ERG . . . J 6 213.444 167.283 205.131 1 116.45 ? C20 ERG 602 B 1 
HETATM 21 C C21 ERG . . . J 6 213.759 168.602 204.436 1 116.45 ? C21 ERG 602 B 1 
HETATM 22 C C22 ERG . . . J 6 214.172 167.29 206.455 1 116.45 ? C22 ERG 602 B 1 
HETATM 23 C C23 ERG . . . J 6 213.928 167.892 207.568 1 116.45 ? C23 ERG 602 B 1 
HETATM 24 C C24 ERG . . . J 6 212.798 168.817 207.923 1 116.45 ? C24 ERG 602 B 1 
HETATM 25 C C25 ERG . . . J 6 212.368 168.645 209.411 1 116.45 ? C25 ERG 602 B 1 
HETATM 26 C C26 ERG . . . J 6 213.444 168.044 210.303 1 116.45 ? C26 ERG 602 B 1 
HETATM 27 C C27 ERG . . . J 6 211.86 169.954 210.025 1 116.45 ? C27 ERG 602 B 1 
HETATM 28 C C28 ERG . . . J 6 213.067 170.256 207.515 1 116.45 ? C28 ERG 602 B 1 
HETATM 29 O O1 ERG . . . J 6 216.323 161.528 195.402 1 116.45 ? O1 ERG 602 B 1 
#
_model_server_stats.io_time_ms              12 
_model_server_stats.parse_time_ms           15 
_model_server_stats.create_model_time_ms    58 
_model_server_stats.query_time_ms           283 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           29 
#