data_8C85 # _model_server_result.job_id rAiCP9YvIpo2oIxWaoHoAA _model_server_result.datetime_utc '2024-11-12 23:56:45' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8c85 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":201}' # _entry.id 8C85 # _exptl.entry_id 8C85 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 302.302 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (3,5-dimethylphenyl)-(3-methoxy-5-nitro-4-oxidanyl-phenyl)methanone _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8C85 _cell.length_a 42.059 _cell.length_b 84.862 _cell.length_c 64.275 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8C85 _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall 'P 2 2ab' _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F 1 1 A,B,C,D,E,F 1 2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_655 -x+1,-y,z -1 0 0 0 -1 0 0 0 1 42.059 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'C16 H16 N O5 1' _chem_comp.formula_weight 302.302 _chem_comp.id U1F _chem_comp.mon_nstd_flag . _chem_comp.name (3,5-dimethylphenyl)-(3-methoxy-5-nitro-4-oxidanyl-phenyl)methanone _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 U1F sing 339 n n C1 C8 U1F sing 340 n n C1 O1 U1F doub 341 n n C10 C11 U1F doub 342 n y C10 C15 U1F sing 343 n n C10 C9 U1F sing 344 n y C11 C12 U1F sing 345 n y C12 C13 U1F doub 346 n y C12 C16 U1F sing 347 n n C13 C8 U1F sing 348 n y C14 O2 U1F sing 349 n n C2 C3 U1F doub 350 n y C2 C5 U1F sing 351 n y C3 C4 U1F sing 352 n y C4 C7 U1F doub 353 n y C4 O2 U1F sing 354 n n C5 C6 U1F doub 355 n y C6 C7 U1F sing 356 n y C6 N1 U1F sing 357 n n C7 O5 U1F sing 358 n n C8 C9 U1F doub 359 n y N1 O3 U1F doub 360 n n N1 O4 U1F sing 361 n n C11 H1 U1F sing 362 n n C13 H2 U1F sing 363 n n C14 H3 U1F sing 364 n n C14 H4 U1F sing 365 n n C14 H5 U1F sing 366 n n C15 H6 U1F sing 367 n n C15 H7 U1F sing 368 n n C15 H8 U1F sing 369 n n C16 H9 U1F sing 370 n n C16 H10 U1F sing 371 n n C16 H11 U1F sing 372 n n C3 H12 U1F sing 373 n n C5 H13 U1F sing 374 n n C9 H14 U1F sing 375 n n O5 H15 U1F sing 376 n n O4 H16 U1F sing 377 n n # _atom_sites.entry_id 8C85 _atom_sites.fract_transf_matrix[1][1] 0.023776 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011784 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015558 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 U1F B 1 201 201 U1F LDN . D 2 U1F A 1 201 201 U1F LDN . E 3 HOH B 1 301 169 HOH HOH . E 3 HOH B 2 302 127 HOH HOH . E 3 HOH B 3 303 99 HOH HOH . E 3 HOH B 4 304 204 HOH HOH . E 3 HOH B 5 305 182 HOH HOH . E 3 HOH B 6 306 181 HOH HOH . E 3 HOH B 7 307 194 HOH HOH . E 3 HOH B 8 308 144 HOH HOH . E 3 HOH B 9 309 49 HOH HOH . E 3 HOH B 10 310 89 HOH HOH . E 3 HOH B 11 311 22 HOH HOH . E 3 HOH B 12 312 162 HOH HOH . E 3 HOH B 13 313 17 HOH HOH . E 3 HOH B 14 314 208 HOH HOH . E 3 HOH B 15 315 77 HOH HOH . E 3 HOH B 16 316 15 HOH HOH . E 3 HOH B 17 317 184 HOH HOH . E 3 HOH B 18 318 133 HOH HOH . E 3 HOH B 19 319 190 HOH HOH . E 3 HOH B 20 320 45 HOH HOH . E 3 HOH B 21 321 195 HOH HOH . E 3 HOH B 22 322 188 HOH HOH . E 3 HOH B 23 323 25 HOH HOH . E 3 HOH B 24 324 106 HOH HOH . E 3 HOH B 25 325 36 HOH HOH . E 3 HOH B 26 326 46 HOH HOH . E 3 HOH B 27 327 39 HOH HOH . E 3 HOH B 28 328 5 HOH HOH . E 3 HOH B 29 329 30 HOH HOH . E 3 HOH B 30 330 67 HOH HOH . E 3 HOH B 31 331 23 HOH HOH . E 3 HOH B 32 332 33 HOH HOH . E 3 HOH B 33 333 85 HOH HOH . E 3 HOH B 34 334 2 HOH HOH . E 3 HOH B 35 335 95 HOH HOH . E 3 HOH B 36 336 70 HOH HOH . E 3 HOH B 37 337 214 HOH HOH . E 3 HOH B 38 338 34 HOH HOH . E 3 HOH B 39 339 69 HOH HOH . E 3 HOH B 40 340 64 HOH HOH . E 3 HOH B 41 341 202 HOH HOH . E 3 HOH B 42 342 80 HOH HOH . E 3 HOH B 43 343 3 HOH HOH . E 3 HOH B 44 344 185 HOH HOH . E 3 HOH B 45 345 145 HOH HOH . E 3 HOH B 46 346 100 HOH HOH . E 3 HOH B 47 347 8 HOH HOH . E 3 HOH B 48 348 157 HOH HOH . E 3 HOH B 49 349 26 HOH HOH . E 3 HOH B 50 350 21 HOH HOH . E 3 HOH B 51 351 197 HOH HOH . E 3 HOH B 52 352 56 HOH HOH . E 3 HOH B 53 353 90 HOH HOH . E 3 HOH B 54 354 47 HOH HOH . E 3 HOH B 55 355 18 HOH HOH . E 3 HOH B 56 356 161 HOH HOH . E 3 HOH B 57 357 152 HOH HOH . E 3 HOH B 58 358 167 HOH HOH . E 3 HOH B 59 359 44 HOH HOH . E 3 HOH B 60 360 130 HOH HOH . E 3 HOH B 61 361 48 HOH HOH . E 3 HOH B 62 362 199 HOH HOH . E 3 HOH B 63 363 73 HOH HOH . E 3 HOH B 64 364 206 HOH HOH . E 3 HOH B 65 365 128 HOH HOH . E 3 HOH B 66 366 136 HOH HOH . E 3 HOH B 67 367 31 HOH HOH . E 3 HOH B 68 368 40 HOH HOH . E 3 HOH B 69 369 55 HOH HOH . E 3 HOH B 70 370 183 HOH HOH . E 3 HOH B 71 371 201 HOH HOH . E 3 HOH B 72 372 92 HOH HOH . E 3 HOH B 73 373 63 HOH HOH . E 3 HOH B 74 374 11 HOH HOH . E 3 HOH B 75 375 168 HOH HOH . E 3 HOH B 76 376 87 HOH HOH . E 3 HOH B 77 377 121 HOH HOH . E 3 HOH B 78 378 113 HOH HOH . E 3 HOH B 79 379 52 HOH HOH . E 3 HOH B 80 380 94 HOH HOH . E 3 HOH B 81 381 177 HOH HOH . E 3 HOH B 82 382 50 HOH HOH . E 3 HOH B 83 383 98 HOH HOH . E 3 HOH B 84 384 71 HOH HOH . E 3 HOH B 85 385 74 HOH HOH . E 3 HOH B 86 386 60 HOH HOH . E 3 HOH B 87 387 147 HOH HOH . E 3 HOH B 88 388 179 HOH HOH . E 3 HOH B 89 389 142 HOH HOH . E 3 HOH B 90 390 93 HOH HOH . E 3 HOH B 91 391 126 HOH HOH . E 3 HOH B 92 392 159 HOH HOH . E 3 HOH B 93 393 139 HOH HOH . E 3 HOH B 94 394 174 HOH HOH . F 3 HOH A 1 301 148 HOH HOH . F 3 HOH A 2 302 198 HOH HOH . F 3 HOH A 3 303 211 HOH HOH . F 3 HOH A 4 304 61 HOH HOH . F 3 HOH A 5 305 165 HOH HOH . F 3 HOH A 6 306 119 HOH HOH . F 3 HOH A 7 307 146 HOH HOH . F 3 HOH A 8 308 20 HOH HOH . F 3 HOH A 9 309 163 HOH HOH . F 3 HOH A 10 310 54 HOH HOH . F 3 HOH A 11 311 86 HOH HOH . F 3 HOH A 12 312 108 HOH HOH . F 3 HOH A 13 313 104 HOH HOH . F 3 HOH A 14 314 57 HOH HOH . F 3 HOH A 15 315 96 HOH HOH . F 3 HOH A 16 316 149 HOH HOH . F 3 HOH A 17 317 14 HOH HOH . F 3 HOH A 18 318 43 HOH HOH . F 3 HOH A 19 319 4 HOH HOH . F 3 HOH A 20 320 156 HOH HOH . F 3 HOH A 21 321 13 HOH HOH . F 3 HOH A 22 322 153 HOH HOH . F 3 HOH A 23 323 27 HOH HOH . F 3 HOH A 24 324 189 HOH HOH . F 3 HOH A 25 325 207 HOH HOH . F 3 HOH A 26 326 28 HOH HOH . F 3 HOH A 27 327 81 HOH HOH . F 3 HOH A 28 328 7 HOH HOH . F 3 HOH A 29 329 76 HOH HOH . F 3 HOH A 30 330 51 HOH HOH . F 3 HOH A 31 331 122 HOH HOH . F 3 HOH A 32 332 12 HOH HOH . F 3 HOH A 33 333 109 HOH HOH . F 3 HOH A 34 334 16 HOH HOH . F 3 HOH A 35 335 19 HOH HOH . F 3 HOH A 36 336 10 HOH HOH . F 3 HOH A 37 337 129 HOH HOH . F 3 HOH A 38 338 155 HOH HOH . F 3 HOH A 39 339 9 HOH HOH . F 3 HOH A 40 340 101 HOH HOH . F 3 HOH A 41 341 35 HOH HOH . F 3 HOH A 42 342 24 HOH HOH . F 3 HOH A 43 343 105 HOH HOH . F 3 HOH A 44 344 91 HOH HOH . F 3 HOH A 45 345 125 HOH HOH . F 3 HOH A 46 346 196 HOH HOH . F 3 HOH A 47 347 37 HOH HOH . F 3 HOH A 48 348 141 HOH HOH . F 3 HOH A 49 349 53 HOH HOH . F 3 HOH A 50 350 111 HOH HOH . F 3 HOH A 51 351 191 HOH HOH . F 3 HOH A 52 352 117 HOH HOH . F 3 HOH A 53 353 205 HOH HOH . F 3 HOH A 54 354 6 HOH HOH . F 3 HOH A 55 355 203 HOH HOH . F 3 HOH A 56 356 38 HOH HOH . F 3 HOH A 57 357 116 HOH HOH . F 3 HOH A 58 358 118 HOH HOH . F 3 HOH A 59 359 82 HOH HOH . F 3 HOH A 60 360 29 HOH HOH . F 3 HOH A 61 361 115 HOH HOH . F 3 HOH A 62 362 209 HOH HOH . F 3 HOH A 63 363 59 HOH HOH . F 3 HOH A 64 364 103 HOH HOH . F 3 HOH A 65 365 192 HOH HOH . F 3 HOH A 66 366 131 HOH HOH . F 3 HOH A 67 367 79 HOH HOH . F 3 HOH A 68 368 97 HOH HOH . F 3 HOH A 69 369 58 HOH HOH . F 3 HOH A 70 370 193 HOH HOH . F 3 HOH A 71 371 154 HOH HOH . F 3 HOH A 72 372 213 HOH HOH . F 3 HOH A 73 373 186 HOH HOH . F 3 HOH A 74 374 200 HOH HOH . F 3 HOH A 75 375 151 HOH HOH . F 3 HOH A 76 376 83 HOH HOH . F 3 HOH A 77 377 160 HOH HOH . F 3 HOH A 78 378 171 HOH HOH . F 3 HOH A 79 379 143 HOH HOH . F 3 HOH A 80 380 110 HOH HOH . F 3 HOH A 81 381 140 HOH HOH . F 3 HOH A 82 382 210 HOH HOH . F 3 HOH A 83 383 88 HOH HOH . F 3 HOH A 84 384 164 HOH HOH . F 3 HOH A 85 385 75 HOH HOH . F 3 HOH A 86 386 42 HOH HOH . F 3 HOH A 87 387 135 HOH HOH . F 3 HOH A 88 388 180 HOH HOH . F 3 HOH A 89 389 212 HOH HOH . F 3 HOH A 90 390 175 HOH HOH . F 3 HOH A 91 391 66 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 U1F . . . D 2 19.642 0.927 25.805 0.5 16.24 ? C1 U1F 201 A 1 HETATM 2 C C10 U1F . . . D 2 20.703 1.111 22.219 0.5 12.47 ? C10 U1F 201 A 1 HETATM 3 C C11 U1F . . . D 2 20.952 -0.234 21.922 0.5 12.03 ? C11 U1F 201 A 1 HETATM 4 C C12 U1F . . . D 2 20.788 -1.236 22.901 0.5 11.04 ? C12 U1F 201 A 1 HETATM 5 C C13 U1F . . . D 2 20.377 -0.867 24.197 0.5 12.26 ? C13 U1F 201 A 1 HETATM 6 C C14 U1F . . . D 2 18.093 2.08 30.139 0.5 23.23 ? C14 U1F 201 A 1 HETATM 7 C C15 U1F . . . D 2 20.839 2.2 21.236 0.5 14.39 ? C15 U1F 201 A 1 HETATM 8 C C16 U1F . . . D 2 21.039 -2.614 22.513 0.5 13.32 ? C16 U1F 201 A 1 HETATM 9 C C2 U1F . . . D 2 20.054 0.486 27.056 0.5 17.16 ? C2 U1F 201 A 1 HETATM 10 C C3 U1F . . . D 2 19.394 1.041 28.154 0.5 19.64 ? C3 U1F 201 A 1 HETATM 11 C C4 U1F . . . D 2 19.747 0.706 29.443 0.5 19.51 ? C4 U1F 201 A 1 HETATM 12 C C5 U1F . . . D 2 21.153 -0.36 27.26 0.5 18.62 ? C5 U1F 201 A 1 HETATM 13 C C6 U1F . . . D 2 21.535 -0.643 28.589 0.5 19.85 ? C6 U1F 201 A 1 HETATM 14 C C7 U1F . . . D 2 20.83 -0.108 29.653 0.5 19.87 ? C7 U1F 201 A 1 HETATM 15 C C8 U1F . . . D 2 20.212 0.476 24.556 0.5 14.42 ? C8 U1F 201 A 1 HETATM 16 C C9 U1F . . . D 2 20.239 1.381 23.509 0.5 13.47 ? C9 U1F 201 A 1 HETATM 17 N N1 U1F . . . D 2 22.575 -1.457 28.906 0.5 26.16 ? N1 U1F 201 A 1 HETATM 18 O O1 U1F . . . D 2 18.672 1.736 25.757 0.5 20.08 ? O1 U1F 201 A 1 HETATM 19 O O2 U1F . . . D 2 19.135 1.188 30.563 0.5 23.09 ? O2 U1F 201 A 1 HETATM 20 O O3 U1F . . . D 2 23.291 -2.033 27.86 0.5 30.35 -1 O3 U1F 201 A 1 HETATM 21 O O4 U1F . . . D 2 23.019 -1.66 30.486 0.5 30.11 ? O4 U1F 201 A 1 HETATM 22 O O5 U1F . . . D 2 21.173 -0.383 30.935 0.5 21.45 ? O5 U1F 201 A 1 # _model_server_stats.io_time_ms 55 _model_server_stats.parse_time_ms 36 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 224 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 22 #