data_8C8D # _model_server_result.job_id rdMyt-vOo1COZ8IY7cREUw _model_server_result.datetime_utc '2025-01-10 12:43:35' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8c8d # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":1103}' # _entry.id 8C8D # _exptl.entry_id 8C8D _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8C8D _cell.length_a 51.58 _cell.length_b 57.01 _cell.length_c 113.42 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8C8D _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall 'P 2ac 2ab' _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 228 A CYS 925 1_555 A SG CYS 252 A CYS 949 1_555 ? ? ? ? B ? ? ? ? ? ? ? 2.039 ? metalc ? metalc1 A NE2 HIS 35 A HIS 732 1_555 D ZN ZN . A ZN 1103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.137 ? metalc ? metalc2 A ND1 HIS 37 A HIS 734 1_555 D ZN ZN . A ZN 1103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.104 ? metalc ? metalc3 A OD2 ASP 39 A ASP 736 1_555 E ZN ZN . A ZN 1104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.378 ? metalc ? metalc4 A NE2 HIS 40 A HIS 737 1_555 E ZN ZN . A ZN 1104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.114 ? metalc ? metalc5 A NE2 HIS 96 A HIS 793 1_555 D ZN ZN . A ZN 1103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.136 ? metalc ? metalc6 A OD2 ASP 118 A ASP 815 1_555 D ZN ZN . A ZN 1103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.392 ? metalc ? metalc7 A OD2 ASP 118 A ASP 815 1_555 E ZN ZN . A ZN 1104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.14 ? metalc ? metalc8 B O2 U2C . A U2C 1101 1_555 D ZN ZN . A ZN 1103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? metalc ? metalc9 B O3 U2C . A U2C 1101 1_555 D ZN ZN . A ZN 1103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.265 ? metalc ? metalc10 B O2 U2C . A U2C 1101 1_555 E ZN ZN . A ZN 1104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? metalc ? metalc11 E ZN ZN . A ZN 1104 1_555 F O HOH . A HOH 1205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.085 ? metalc ? metalc12 E ZN ZN . A ZN 1104 1_555 F O HOH . A HOH 1280 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.185 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 8C8D _atom_sites.fract_transf_matrix[1][1] 0.019387 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017541 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008817 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 U2C A 1 1101 1101 U2C UNL . C 2 U2C A 1 1102 1102 U2C UNL . D 3 ZN A 1 1103 1 ZN ZN . E 3 ZN A 1 1104 2 ZN ZN . F 4 HOH A 1 1201 116 HOH HOH . F 4 HOH A 2 1202 94 HOH HOH . F 4 HOH A 3 1203 32 HOH HOH . F 4 HOH A 4 1204 108 HOH HOH . F 4 HOH A 5 1205 26 HOH HOH . F 4 HOH A 6 1206 21 HOH HOH . F 4 HOH A 7 1207 56 HOH HOH . F 4 HOH A 8 1208 101 HOH HOH . F 4 HOH A 9 1209 98 HOH HOH . F 4 HOH A 10 1210 48 HOH HOH . F 4 HOH A 11 1211 61 HOH HOH . F 4 HOH A 12 1212 103 HOH HOH . F 4 HOH A 13 1213 54 HOH HOH . F 4 HOH A 14 1214 10 HOH HOH . F 4 HOH A 15 1215 49 HOH HOH . F 4 HOH A 16 1216 47 HOH HOH . F 4 HOH A 17 1217 89 HOH HOH . F 4 HOH A 18 1218 16 HOH HOH . F 4 HOH A 19 1219 14 HOH HOH . F 4 HOH A 20 1220 7 HOH HOH . F 4 HOH A 21 1221 9 HOH HOH . F 4 HOH A 22 1222 91 HOH HOH . F 4 HOH A 23 1223 74 HOH HOH . F 4 HOH A 24 1224 70 HOH HOH . F 4 HOH A 25 1225 46 HOH HOH . F 4 HOH A 26 1226 90 HOH HOH . F 4 HOH A 27 1227 23 HOH HOH . F 4 HOH A 28 1228 81 HOH HOH . F 4 HOH A 29 1229 38 HOH HOH . F 4 HOH A 30 1230 27 HOH HOH . F 4 HOH A 31 1231 5 HOH HOH . F 4 HOH A 32 1232 110 HOH HOH . F 4 HOH A 33 1233 77 HOH HOH . F 4 HOH A 34 1234 28 HOH HOH . F 4 HOH A 35 1235 75 HOH HOH . F 4 HOH A 36 1236 19 HOH HOH . F 4 HOH A 37 1237 53 HOH HOH . F 4 HOH A 38 1238 69 HOH HOH . F 4 HOH A 39 1239 31 HOH HOH . F 4 HOH A 40 1240 62 HOH HOH . F 4 HOH A 41 1241 20 HOH HOH . F 4 HOH A 42 1242 106 HOH HOH . F 4 HOH A 43 1243 71 HOH HOH . F 4 HOH A 44 1244 33 HOH HOH . F 4 HOH A 45 1245 72 HOH HOH . F 4 HOH A 46 1246 15 HOH HOH . F 4 HOH A 47 1247 67 HOH HOH . F 4 HOH A 48 1248 88 HOH HOH . F 4 HOH A 49 1249 65 HOH HOH . F 4 HOH A 50 1250 12 HOH HOH . F 4 HOH A 51 1251 42 HOH HOH . F 4 HOH A 52 1252 37 HOH HOH . F 4 HOH A 53 1253 4 HOH HOH . F 4 HOH A 54 1254 63 HOH HOH . F 4 HOH A 55 1255 43 HOH HOH . F 4 HOH A 56 1256 80 HOH HOH . F 4 HOH A 57 1257 44 HOH HOH . F 4 HOH A 58 1258 29 HOH HOH . F 4 HOH A 59 1259 79 HOH HOH . F 4 HOH A 60 1260 17 HOH HOH . F 4 HOH A 61 1261 11 HOH HOH . F 4 HOH A 62 1262 2 HOH HOH . F 4 HOH A 63 1263 51 HOH HOH . F 4 HOH A 64 1264 105 HOH HOH . F 4 HOH A 65 1265 39 HOH HOH . F 4 HOH A 66 1266 55 HOH HOH . F 4 HOH A 67 1267 6 HOH HOH . F 4 HOH A 68 1268 24 HOH HOH . F 4 HOH A 69 1269 8 HOH HOH . F 4 HOH A 70 1270 117 HOH HOH . F 4 HOH A 71 1271 3 HOH HOH . F 4 HOH A 72 1272 52 HOH HOH . F 4 HOH A 73 1273 95 HOH HOH . F 4 HOH A 74 1274 97 HOH HOH . F 4 HOH A 75 1275 59 HOH HOH . F 4 HOH A 76 1276 87 HOH HOH . F 4 HOH A 77 1277 82 HOH HOH . F 4 HOH A 78 1278 35 HOH HOH . F 4 HOH A 79 1279 100 HOH HOH . F 4 HOH A 80 1280 45 HOH HOH . F 4 HOH A 81 1281 40 HOH HOH . F 4 HOH A 82 1282 104 HOH HOH . F 4 HOH A 83 1283 66 HOH HOH . F 4 HOH A 84 1284 118 HOH HOH . F 4 HOH A 85 1285 25 HOH HOH . F 4 HOH A 86 1286 86 HOH HOH . F 4 HOH A 87 1287 102 HOH HOH . F 4 HOH A 88 1288 73 HOH HOH . F 4 HOH A 89 1289 60 HOH HOH . F 4 HOH A 90 1290 96 HOH HOH . F 4 HOH A 91 1291 13 HOH HOH . F 4 HOH A 92 1292 36 HOH HOH . F 4 HOH A 93 1293 30 HOH HOH . F 4 HOH A 94 1294 83 HOH HOH . F 4 HOH A 95 1295 99 HOH HOH . F 4 HOH A 96 1296 34 HOH HOH . F 4 HOH A 97 1297 58 HOH HOH . F 4 HOH A 98 1298 115 HOH HOH . F 4 HOH A 99 1299 119 HOH HOH . F 4 HOH A 100 1300 112 HOH HOH . F 4 HOH A 101 1301 113 HOH HOH . F 4 HOH A 102 1302 93 HOH HOH . F 4 HOH A 103 1303 92 HOH HOH . F 4 HOH A 104 1304 68 HOH HOH . F 4 HOH A 105 1305 41 HOH HOH . F 4 HOH A 106 1306 50 HOH HOH . F 4 HOH A 107 1307 111 HOH HOH . F 4 HOH A 108 1308 85 HOH HOH . F 4 HOH A 109 1309 57 HOH HOH . F 4 HOH A 110 1310 114 HOH HOH . F 4 HOH A 111 1311 78 HOH HOH . F 4 HOH A 112 1312 76 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 3 _atom_site.Cartn_x -9.1 _atom_site.Cartn_y 13.75 _atom_site.Cartn_z -30.463 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 23.72 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 1103 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 256 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #