data_8C9G
#
_model_server_result.job_id            VExEP-lYftom6TYHmdds7w 
_model_server_result.datetime_utc      '2024-11-16 22:39:26' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8c9g 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"I","auth_seq_id":1002}' 
#
_entry.id    8C9G 
#
_exptl.entry_id    8C9G 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              500.622 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            MUPIROCIN 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          95.64 
_cell.angle_gamma         90 
_cell.entry_id            8C9G 
_cell.length_a            66.82 
_cell.length_b            144.28 
_cell.length_c            108.37 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8C9G 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    'P 2yb' 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q 1 1 
A,C,D,E,F,G,P 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 D N N 
? 3 I N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A SG CYS 887 A CYS 887 1_555 C ZN ZN . A ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.333 ? 
metalc ? metalc2 A SG CYS 890 A CYS 890 1_555 C ZN ZN . A ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.313 ? 
metalc ? metalc3 A SG CYS 907 A CYS 907 1_555 C ZN ZN . A ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.337 ? 
metalc ? metalc4 A SG CYS 910 A CYS 910 1_555 C ZN ZN . A ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.327 ? 
metalc ? metalc5 B SG CYS 887 B CYS 887 1_555 H ZN ZN . B ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.342 ? 
metalc ? metalc6 B SG CYS 890 B CYS 890 1_555 H ZN ZN . B ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.315 ? 
metalc ? metalc7 B SG CYS 907 B CYS 907 1_555 H ZN ZN . B ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.327 ? 
metalc ? metalc8 B SG CYS 910 B CYS 910 1_555 H ZN ZN . B ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.317 ? 
#
_chem_comp.formula           'C26 H44 O9' 
_chem_comp.formula_weight    500.622 
_chem_comp.id                MRC 
_chem_comp.mon_nstd_flag     n 
_chem_comp.name              MUPIROCIN 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     '9-[(E)-4-[(2S,3R,4R,5S)-3,4-bis(oxidanyl)-5-[[(2S,3S)-3-[(2S,3S)-3-oxidanylbutan-2-yl]oxiran-2-yl]methyl]oxan-2-yl]-3-methyl-but-2-enoyl]oxynonanoic acid;PSEUDOMONIC ACID' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C6' C5' MRC sing 250 n n 
C6' C7' MRC sing 251 n n 
C8' C7' MRC sing 252 n n 
C8' C9' MRC sing 253 n n 
C5' C4' MRC sing 254 n n 
C16 C8 MRC sing 255 n n 
C16 O5 MRC sing 256 n n 
C9' O1A MRC sing 257 n n 
C3' C4' MRC sing 258 n n 
C3' C2' MRC sing 259 n n 
C8 C9 MRC sing 260 n n 
C8 C7 MRC sing 261 n n 
O5 C5 MRC sing 262 n n 
O1A C1 MRC sing 263 n n 
C10 C9 MRC sing 264 n n 
C10 O10 MRC sing 265 n n 
C10 C11 MRC sing 266 n n 
O1B C1 MRC doub 267 n n 
C1 C2 MRC sing 268 n n 
O7 C7 MRC sing 269 n n 
C2 C3 MRC doub 270 e n 
O1Q C1' MRC doub 271 n n 
C5 C4 MRC sing 272 n n 
C5 C6 MRC sing 273 n n 
C7 C6 MRC sing 274 n n 
C2' C1' MRC sing 275 n n 
O10 C11 MRC sing 276 n n 
C15 C3 MRC sing 277 n n 
C3 C4 MRC sing 278 n n 
C11 C12 MRC sing 279 n n 
C1' O1P MRC sing 280 n n 
C12 C17 MRC sing 281 n n 
C12 C13 MRC sing 282 n n 
C6 O6 MRC sing 283 n n 
C14 C13 MRC sing 284 n n 
C13 O13 MRC sing 285 n n 
C2 H171 MRC sing 286 n n 
C4 H1 MRC sing 287 n n 
C4 H172 MRC sing 288 n n 
C5 H91 MRC sing 289 n n 
C6 H2 MRC sing 290 n n 
C7 H3 MRC sing 291 n n 
C8 H4 MRC sing 292 n n 
C9 H5 MRC sing 293 n n 
C9 H92 MRC sing 294 n n 
C10 H10 MRC sing 295 n n 
C11 H11 MRC sing 296 n n 
C12 H12 MRC sing 297 n n 
C13 H13 MRC sing 298 n n 
C14 H141 MRC sing 299 n n 
C14 H142 MRC sing 300 n n 
C14 H143 MRC sing 301 n n 
C15 H151 MRC sing 302 n n 
C15 H152 MRC sing 303 n n 
C15 H153 MRC sing 304 n n 
C16 H161 MRC sing 305 n n 
C16 H162 MRC sing 306 n n 
O1P HOP1 MRC sing 307 n n 
C2' "H2'1" MRC sing 308 n n 
C2' "H2'2" MRC sing 309 n n 
C3' "H3'1" MRC sing 310 n n 
C3' "H3'2" MRC sing 311 n n 
C4' "H4'1" MRC sing 312 n n 
C4' "H4'2" MRC sing 313 n n 
C5' "H5'1" MRC sing 314 n n 
C5' "H5'2" MRC sing 315 n n 
C6' "H6'1" MRC sing 316 n n 
C6' "H6'2" MRC sing 317 n n 
C7' "H7'1" MRC sing 318 n n 
C7' "H7'2" MRC sing 319 n n 
C8' "H8'1" MRC sing 320 n n 
C8' "H8'2" MRC sing 321 n n 
C9' "H9'1" MRC sing 322 n n 
C9' "H9'2" MRC sing 323 n n 
O7 HO7 MRC sing 324 n n 
O6 HO6 MRC sing 325 n n 
C17 H6 MRC sing 326 n n 
C17 H7 MRC sing 327 n n 
C17 H173 MRC sing 328 n n 
O13 HO13 MRC sing 329 n n 
#
_atom_sites.entry_id                     8C9G 
_atom_sites.fract_transf_matrix[1][1]    0.014966 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.001478 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.006931 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009273 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 ZN A 1 1001 1003 ZN ZN . 
D 3 MRC A 1 1002 1004 MRC MRC . 
E 4 CL A 1 1003 1 CL CL . 
F 4 CL A 1 1004 3 CL CL . 
G 5 NA A 1 1005 1 NA NA . 
H 2 ZN B 1 1001 1004 ZN ZN . 
I 3 MRC B 1 1002 1005 MRC MRC . 
J 6 GOL B 1 1003 1006 GOL GOL . 
K 6 GOL B 1 1004 1007 GOL GOL . 
L 4 CL B 1 1005 2 CL CL . 
M 4 CL B 1 1006 4 CL CL . 
N 5 NA B 1 1007 2 NA NA . 
O 5 NA B 1 1008 3 NA NA . 
P 7 HOH A 1 1101 4 HOH HOH . 
P 7 HOH A 2 1102 7 HOH HOH . 
P 7 HOH A 3 1103 2 HOH HOH . 
P 7 HOH A 4 1104 3 HOH HOH . 
P 7 HOH A 5 1105 6 HOH HOH . 
P 7 HOH A 6 1106 25 HOH HOH . 
P 7 HOH A 7 1107 13 HOH HOH . 
P 7 HOH A 8 1108 17 HOH HOH . 
P 7 HOH A 9 1109 10 HOH HOH . 
P 7 HOH A 10 1110 19 HOH HOH . 
P 7 HOH A 11 1111 18 HOH HOH . 
P 7 HOH A 12 1112 5 HOH HOH . 
P 7 HOH A 13 1113 16 HOH HOH . 
P 7 HOH A 14 1114 9 HOH HOH . 
P 7 HOH A 15 1115 26 HOH HOH . 
Q 7 HOH B 1 1101 8 HOH HOH . 
Q 7 HOH B 2 1102 11 HOH HOH . 
Q 7 HOH B 3 1103 1 HOH HOH . 
Q 7 HOH B 4 1104 23 HOH HOH . 
Q 7 HOH B 5 1105 12 HOH HOH . 
Q 7 HOH B 6 1106 20 HOH HOH . 
Q 7 HOH B 7 1107 22 HOH HOH . 
Q 7 HOH B 8 1108 14 HOH HOH . 
Q 7 HOH B 9 1109 21 HOH HOH . 
Q 7 HOH B 10 1110 15 HOH HOH . 
Q 7 HOH B 11 1111 24 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 MRC . . . I 3 -7.953 36.49 36.941 1 52.1 ? C1 MRC 1002 B 1 
HETATM 2 C C2 MRC . . . I 3 -8.223 37.308 35.662 1 50 ? C2 MRC 1002 B 1 
HETATM 3 C C3 MRC . . . I 3 -7.251 37.306 34.466 1 47.23 ? C3 MRC 1002 B 1 
HETATM 4 C C4 MRC . . . I 3 -7.625 38.137 33.239 1 58.97 ? C4 MRC 1002 B 1 
HETATM 5 C C5 MRC . . . I 3 -6.83 39.441 33.202 1 56.69 ? C5 MRC 1002 B 1 
HETATM 6 C C6 MRC . . . I 3 -7 40.08 31.832 1 51.37 ? C6 MRC 1002 B 1 
HETATM 7 C C7 MRC . . . I 3 -6.209 41.371 31.777 1 54.51 ? C7 MRC 1002 B 1 
HETATM 8 C C8 MRC . . . I 3 -6.681 42.3 32.886 1 51.44 ? C8 MRC 1002 B 1 
HETATM 9 C C9 MRC . . . I 3 -8.14 42.701 32.656 1 51.61 ? C9 MRC 1002 B 1 
HETATM 10 C C10 MRC . . . I 3 -8.207 43.805 31.598 1 52.54 ? C10 MRC 1002 B 1 
HETATM 11 C C11 MRC . . . I 3 -8.793 43.404 30.276 1 59.14 ? C11 MRC 1002 B 1 
HETATM 12 C C12 MRC . . . I 3 -8.269 44.192 29.073 1 53.52 ? C12 MRC 1002 B 1 
HETATM 13 C C13 MRC . . . I 3 -9.311 44.16 27.954 1 49.87 ? C13 MRC 1002 B 1 
HETATM 14 C C14 MRC . . . I 3 -8.849 45.059 26.807 1 51.93 ? C14 MRC 1002 B 1 
HETATM 15 C C15 MRC . . . I 3 -5.951 36.493 34.438 1 50.54 ? C15 MRC 1002 B 1 
HETATM 16 C C16 MRC . . . I 3 -6.545 41.578 34.223 1 53.99 ? C16 MRC 1002 B 1 
HETATM 17 C C1' MRC . . . I 3 -16.575 35.432 40.901 1 89.01 ? C1' MRC 1002 B 1 
HETATM 18 O O1P MRC . . . I 3 -15.854 34.618 40.282 1 90.26 ? O1P MRC 1002 B 1 
HETATM 19 O O1Q MRC . . . I 3 -17.529 35.142 41.657 1 80.2 ? O1Q MRC 1002 B 1 
HETATM 20 C C2' MRC . . . I 3 -16.268 36.921 40.71 1 84.28 ? C2' MRC 1002 B 1 
HETATM 21 C C3' MRC . . . I 3 -15.259 37.386 41.763 1 71.54 ? C3' MRC 1002 B 1 
HETATM 22 C C4' MRC . . . I 3 -13.863 37.485 41.142 1 58.77 ? C4' MRC 1002 B 1 
HETATM 23 C C5' MRC . . . I 3 -13.135 36.146 41.274 1 53.21 ? C5' MRC 1002 B 1 
HETATM 24 C C6' MRC . . . I 3 -11.628 36.39 41.413 1 62.23 ? C6' MRC 1002 B 1 
HETATM 25 C C7' MRC . . . I 3 -10.957 36.371 40.034 1 49.56 ? C7' MRC 1002 B 1 
HETATM 26 C C8' MRC . . . I 3 -9.437 36.297 40.218 1 56.42 ? C8' MRC 1002 B 1 
HETATM 27 C C9' MRC . . . I 3 -8.777 35.718 38.962 1 47.92 ? C9' MRC 1002 B 1 
HETATM 28 O O1A MRC . . . I 3 -8.926 36.642 37.883 1 59.83 ? O1A MRC 1002 B 1 
HETATM 29 O O1B MRC . . . I 3 -6.956 35.788 37.103 1 45.52 ? O1B MRC 1002 B 1 
HETATM 30 O O5 MRC . . . I 3 -7.314 40.352 34.21 1 63.68 ? O5 MRC 1002 B 1 
HETATM 31 O O7 MRC . . . I 3 -4.814 41.082 31.956 1 59.74 ? O7 MRC 1002 B 1 
HETATM 32 O O6 MRC . . . I 3 -6.515 39.185 30.823 1 58.96 ? O6 MRC 1002 B 1 
HETATM 33 O O10 MRC . . . I 3 -9.554 44.187 31.225 1 59.67 ? O10 MRC 1002 B 1 
HETATM 34 C C17 MRC . . . I 3 -6.959 43.574 28.58 1 44.99 ? C17 MRC 1002 B 1 
HETATM 35 O O13 MRC . . . I 3 -10.562 44.636 28.457 1 55.63 ? O13 MRC 1002 B 1 
#
_model_server_stats.io_time_ms              25 
_model_server_stats.parse_time_ms           21 
_model_server_stats.create_model_time_ms    52 
_model_server_stats.query_time_ms           329 
_model_server_stats.encode_time_ms          8 
_model_server_stats.element_count           35 
#