data_8C9W # _model_server_result.job_id pemiXR_dehm297zTTcSd4w _model_server_result.datetime_utc '2025-02-05 04:41:52' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8c9w # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"M","auth_seq_id":1212}' # _entry.id 8C9W # _exptl.entry_id 8C9W _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 106.12 _entity.id 7 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DI(HYDROXYETHYL)ETHER _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8C9W _cell.length_a 39.155 _cell.length_b 178.226 _cell.length_c 139.595 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8C9W _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 7 _struct_asym.id M _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 80 A CYS 71 1_555 A SG CYS 168 A CYS 159 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.05 ? disulf ? disulf2 A SG CYS 83 A CYS 74 1_555 A SG CYS 155 A CYS 146 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.018 ? disulf ? disulf3 A SG CYS 86 A CYS 77 1_555 A SG CYS 175 A CYS 166 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.015 ? disulf ? disulf4 A SG CYS 364 A CYS 259 1_555 A SG CYS 367 A CYS 262 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.076 ? # _chem_comp.formula 'C4 H10 O3' _chem_comp.formula_weight 106.12 _chem_comp.id PEG _chem_comp.mon_nstd_flag . _chem_comp.name DI(HYDROXYETHYL)ETHER _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PEG sing 495 n n C1 C2 PEG sing 496 n n C1 H11 PEG sing 497 n n C1 H12 PEG sing 498 n n O1 HO1 PEG sing 499 n n C2 O2 PEG sing 500 n n C2 H21 PEG sing 501 n n C2 H22 PEG sing 502 n n O2 C3 PEG sing 503 n n C3 C4 PEG sing 504 n n C3 H31 PEG sing 505 n n C3 H32 PEG sing 506 n n C4 O4 PEG sing 507 n n C4 H41 PEG sing 508 n n C4 H42 PEG sing 509 n n O4 HO4 PEG sing 510 n n # _atom_sites.entry_id 8C9W _atom_sites.fract_transf_matrix[1][1] 0.02554 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005611 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007164 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 U30 A 1 1201 900 U30 LIG . C 3 CLR A 1 1202 2403 CLR CLR . D 3 CLR A 1 1203 2404 CLR CLR . E 3 CLR A 1 1204 2405 CLR CLR . F 4 OLA A 1 1205 2406 OLA OLA . G 4 OLA A 1 1206 2409 OLA OLA . H 4 OLA A 1 1207 2411 OLA OLA . I 4 OLA A 1 1208 2418 OLA OLA . J 5 OLC A 1 1209 2424 OLC OLC . K 6 OLB A 1 1210 2426 OLB OLB . L 5 OLC A 1 1211 2427 OLC OLC . M 7 PEG A 1 1212 2429 PEG PEG . N 4 OLA A 1 1213 2430 OLA OLA . O 8 HOH A 1 1301 55 HOH HOH . O 8 HOH A 2 1302 7 HOH HOH . O 8 HOH A 3 1303 6 HOH HOH . O 8 HOH A 4 1304 80 HOH HOH . O 8 HOH A 5 1305 21 HOH HOH . O 8 HOH A 6 1306 35 HOH HOH . O 8 HOH A 7 1307 4 HOH HOH . O 8 HOH A 8 1308 9 HOH HOH . O 8 HOH A 9 1309 46 HOH HOH . O 8 HOH A 10 1310 60 HOH HOH . O 8 HOH A 11 1311 14 HOH HOH . O 8 HOH A 12 1312 10 HOH HOH . O 8 HOH A 13 1313 30 HOH HOH . O 8 HOH A 14 1314 11 HOH HOH . O 8 HOH A 15 1315 42 HOH HOH . O 8 HOH A 16 1316 1 HOH HOH . O 8 HOH A 17 1317 81 HOH HOH . O 8 HOH A 18 1318 34 HOH HOH . O 8 HOH A 19 1319 44 HOH HOH . O 8 HOH A 20 1320 2 HOH HOH . O 8 HOH A 21 1321 40 HOH HOH . O 8 HOH A 22 1322 5 HOH HOH . O 8 HOH A 23 1323 3 HOH HOH . O 8 HOH A 24 1324 16 HOH HOH . O 8 HOH A 25 1325 27 HOH HOH . O 8 HOH A 26 1326 18 HOH HOH . O 8 HOH A 27 1327 47 HOH HOH . O 8 HOH A 28 1328 38 HOH HOH . O 8 HOH A 29 1329 59 HOH HOH . O 8 HOH A 30 1330 39 HOH HOH . O 8 HOH A 31 1331 24 HOH HOH . O 8 HOH A 32 1332 28 HOH HOH . O 8 HOH A 33 1333 69 HOH HOH . O 8 HOH A 34 1334 12 HOH HOH . O 8 HOH A 35 1335 49 HOH HOH . O 8 HOH A 36 1336 54 HOH HOH . O 8 HOH A 37 1337 32 HOH HOH . O 8 HOH A 38 1338 25 HOH HOH . O 8 HOH A 39 1339 45 HOH HOH . O 8 HOH A 40 1340 41 HOH HOH . O 8 HOH A 41 1341 79 HOH HOH . O 8 HOH A 42 1342 31 HOH HOH . O 8 HOH A 43 1343 48 HOH HOH . O 8 HOH A 44 1344 19 HOH HOH . O 8 HOH A 45 1345 26 HOH HOH . O 8 HOH A 46 1346 56 HOH HOH . O 8 HOH A 47 1347 33 HOH HOH . O 8 HOH A 48 1348 63 HOH HOH . O 8 HOH A 49 1349 78 HOH HOH . O 8 HOH A 50 1350 23 HOH HOH . O 8 HOH A 51 1351 66 HOH HOH . O 8 HOH A 52 1352 29 HOH HOH . O 8 HOH A 53 1353 43 HOH HOH . O 8 HOH A 54 1354 57 HOH HOH . O 8 HOH A 55 1355 20 HOH HOH . O 8 HOH A 56 1356 8 HOH HOH . O 8 HOH A 57 1357 17 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PEG . . . M 7 12.657 -21.235 34.191 1 65.71 ? C1 PEG 1212 A 1 HETATM 2 O O1 PEG . . . M 7 14.013 -21.605 34.417 1 66.79 ? O1 PEG 1212 A 1 HETATM 3 C C2 PEG . . . M 7 11.688 -22.371 34.412 1 57.11 ? C2 PEG 1212 A 1 HETATM 4 O O2 PEG . . . M 7 10.409 -21.808 34.711 1 76.32 ? O2 PEG 1212 A 1 HETATM 5 C C3 PEG . . . M 7 9.294 -22.673 34.511 1 62.85 ? C3 PEG 1212 A 1 HETATM 6 C C4 PEG . . . M 7 9.488 -23.96 35.257 1 70.35 ? C4 PEG 1212 A 1 HETATM 7 O O4 PEG . . . M 7 8.318 -24.317 35.971 1 77.5 ? O4 PEG 1212 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 315 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 7 #