data_8C9Z # _model_server_result.job_id mBV7kWIsFlT2a-oeHVio2A _model_server_result.datetime_utc '2025-01-10 12:10:27' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8c9z # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":102}' # _entry.id 8C9Z # _exptl.entry_id 8C9Z _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 180.156 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description beta-D-fructopyranose _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 8C9Z _cell.length_a 76.114 _cell.length_b 76.114 _cell.length_c 113.649 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8C9Z _symmetry.cell_setting ? _symmetry.Int_Tables_number 155 _symmetry.space_group_name_Hall 'R 3 2"' _symmetry.space_group_name_H-M 'H 3 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N # _chem_comp.formula 'C6 H12 O6' _chem_comp.formula_weight 180.156 _chem_comp.id BDF _chem_comp.mon_nstd_flag . _chem_comp.name beta-D-fructopyranose _chem_comp.type 'd-saccharide, beta linking' _chem_comp.pdbx_synonyms beta-D-fructose;D-fructose;fructose # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 BDF sing 70 n n C1 O1 BDF sing 71 n n C1 H11 BDF sing 72 n n C1 H12 BDF sing 73 n n C2 C3 BDF sing 74 n n C2 O2 BDF sing 75 n n C2 O6 BDF sing 76 n n C3 C4 BDF sing 77 n n C3 O3 BDF sing 78 n n C3 H3 BDF sing 79 n n C4 C5 BDF sing 80 n n C4 O4 BDF sing 81 n n C4 H4 BDF sing 82 n n C5 C6 BDF sing 83 n n C5 O5 BDF sing 84 n n C5 H5 BDF sing 85 n n C6 O6 BDF sing 86 n n C6 H61 BDF sing 87 n n C6 H62 BDF sing 88 n n O1 HO1 BDF sing 89 n n O2 HO2 BDF sing 90 n n O3 HO3 BDF sing 91 n n O4 HO4 BDF sing 92 n n O5 HO5 BDF sing 93 n n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.identifier _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version BDF DFrupb 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1 BDF b-D-fructopyranose 'COMMON NAME' GMML 1 BDF b-D-Frup 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1 BDF Fru 'SNFG CARBOHYDRATE SYMBOL' GMML 1 # _atom_sites.entry_id 8C9Z _atom_sites.fract_transf_matrix[1][1] 0.013138 _atom_sites.fract_transf_matrix[1][2] 0.007585 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015171 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008799 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 BDF A 1 101 101 BDF BDF . C 2 BDF A 1 102 201 BDF BDF . D 3 EVB A 1 103 301 EVB EVB . E 3 EVB A 1 104 401 EVB EVB . F 4 GOL A 1 105 501 GOL GOL . G 4 GOL A 1 106 601 GOL GOL . H 5 HOH A 1 201 4 HOH HOH . H 5 HOH A 2 202 112 HOH HOH . H 5 HOH A 3 203 127 HOH HOH . H 5 HOH A 4 204 74 HOH HOH . H 5 HOH A 5 205 109 HOH HOH . H 5 HOH A 6 206 131 HOH HOH . H 5 HOH A 7 207 103 HOH HOH . H 5 HOH A 8 208 13 HOH HOH . H 5 HOH A 9 209 122 HOH HOH . H 5 HOH A 10 210 88 HOH HOH . H 5 HOH A 11 211 120 HOH HOH . H 5 HOH A 12 212 22 HOH HOH . H 5 HOH A 13 213 67 HOH HOH . H 5 HOH A 14 214 2 HOH HOH . H 5 HOH A 15 215 3 HOH HOH . H 5 HOH A 16 216 87 HOH HOH . H 5 HOH A 17 217 119 HOH HOH . H 5 HOH A 18 218 43 HOH HOH . H 5 HOH A 19 219 89 HOH HOH . H 5 HOH A 20 220 15 HOH HOH . H 5 HOH A 21 221 64 HOH HOH . H 5 HOH A 22 222 44 HOH HOH . H 5 HOH A 23 223 8 HOH HOH . H 5 HOH A 24 224 7 HOH HOH . H 5 HOH A 25 225 37 HOH HOH . H 5 HOH A 26 226 31 HOH HOH . H 5 HOH A 27 227 16 HOH HOH . H 5 HOH A 28 228 36 HOH HOH . H 5 HOH A 29 229 27 HOH HOH . H 5 HOH A 30 230 10 HOH HOH . H 5 HOH A 31 231 11 HOH HOH . H 5 HOH A 32 232 1 HOH HOH . H 5 HOH A 33 233 60 HOH HOH . H 5 HOH A 34 234 9 HOH HOH . H 5 HOH A 35 235 30 HOH HOH . H 5 HOH A 36 236 118 HOH HOH . H 5 HOH A 37 237 52 HOH HOH . H 5 HOH A 38 238 104 HOH HOH . H 5 HOH A 39 239 92 HOH HOH . H 5 HOH A 40 240 86 HOH HOH . H 5 HOH A 41 241 55 HOH HOH . H 5 HOH A 42 242 121 HOH HOH . H 5 HOH A 43 243 20 HOH HOH . H 5 HOH A 44 244 113 HOH HOH . H 5 HOH A 45 245 128 HOH HOH . H 5 HOH A 46 246 29 HOH HOH . H 5 HOH A 47 247 56 HOH HOH . H 5 HOH A 48 248 69 HOH HOH . H 5 HOH A 49 249 14 HOH HOH . H 5 HOH A 50 250 39 HOH HOH . H 5 HOH A 51 251 129 HOH HOH . H 5 HOH A 52 252 125 HOH HOH . H 5 HOH A 53 253 136 HOH HOH . H 5 HOH A 54 254 135 HOH HOH . H 5 HOH A 55 255 93 HOH HOH . H 5 HOH A 56 256 42 HOH HOH . H 5 HOH A 57 257 5 HOH HOH . H 5 HOH A 58 258 59 HOH HOH . H 5 HOH A 59 259 101 HOH HOH . H 5 HOH A 60 260 71 HOH HOH . H 5 HOH A 61 261 6 HOH HOH . H 5 HOH A 62 262 46 HOH HOH . H 5 HOH A 63 263 35 HOH HOH . H 5 HOH A 64 264 81 HOH HOH . H 5 HOH A 65 265 33 HOH HOH . H 5 HOH A 66 266 126 HOH HOH . H 5 HOH A 67 267 17 HOH HOH . H 5 HOH A 68 268 58 HOH HOH . H 5 HOH A 69 269 32 HOH HOH . H 5 HOH A 70 270 45 HOH HOH . H 5 HOH A 71 271 61 HOH HOH . H 5 HOH A 72 272 124 HOH HOH . H 5 HOH A 73 273 105 HOH HOH . H 5 HOH A 74 274 25 HOH HOH . H 5 HOH A 75 275 40 HOH HOH . H 5 HOH A 76 276 51 HOH HOH . H 5 HOH A 77 277 75 HOH HOH . H 5 HOH A 78 278 98 HOH HOH . H 5 HOH A 79 279 95 HOH HOH . H 5 HOH A 80 280 137 HOH HOH . H 5 HOH A 81 281 134 HOH HOH . H 5 HOH A 82 282 23 HOH HOH . H 5 HOH A 83 283 57 HOH HOH . H 5 HOH A 84 284 18 HOH HOH . H 5 HOH A 85 285 12 HOH HOH . H 5 HOH A 86 286 21 HOH HOH . H 5 HOH A 87 287 133 HOH HOH . H 5 HOH A 88 288 91 HOH HOH . H 5 HOH A 89 289 132 HOH HOH . H 5 HOH A 90 290 90 HOH HOH . H 5 HOH A 91 291 110 HOH HOH . H 5 HOH A 92 292 24 HOH HOH . H 5 HOH A 93 293 138 HOH HOH . H 5 HOH A 94 294 106 HOH HOH . H 5 HOH A 95 295 130 HOH HOH . H 5 HOH A 96 296 49 HOH HOH . H 5 HOH A 97 297 111 HOH HOH . H 5 HOH A 98 298 38 HOH HOH . H 5 HOH A 99 299 123 HOH HOH . H 5 HOH A 100 300 34 HOH HOH . H 5 HOH A 101 301 85 HOH HOH . H 5 HOH A 102 302 47 HOH HOH . H 5 HOH A 103 303 53 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 BDF . . . C 2 -9.797 15.761 24.967 1 20.66 ? C1 BDF 102 A 1 HETATM 2 C C2 BDF . . . C 2 -10.756 14.598 25.159 1 16.81 ? C2 BDF 102 A 1 HETATM 3 C C3 BDF . . . C 2 -11 14.305 26.646 1 15.2 ? C3 BDF 102 A 1 HETATM 4 C C4 BDF . . . C 2 -11.798 13.013 26.809 1 15.04 ? C4 BDF 102 A 1 HETATM 5 C C5 BDF . . . C 2 -11.073 11.874 26.109 1 13.94 ? C5 BDF 102 A 1 HETATM 6 C C6 BDF . . . C 2 -10.873 12.243 24.657 1 16.41 ? C6 BDF 102 A 1 HETATM 7 O O1 BDF . . . C 2 -9.593 16.035 23.588 1 31.2 ? O1 BDF 102 A 1 HETATM 8 O O2 BDF . . . C 2 -11.999 14.855 24.557 1 20.28 ? O2 BDF 102 A 1 HETATM 9 O O3 BDF . . . C 2 -11.691 15.39 27.253 1 17.14 ? O3 BDF 102 A 1 HETATM 10 O O4 BDF . . . C 2 -12.044 12.746 28.189 1 13.93 ? O4 BDF 102 A 1 HETATM 11 O O5 BDF . . . C 2 -9.771 11.656 26.678 1 13.91 ? O5 BDF 102 A 1 HETATM 12 O O6 BDF . . . C 2 -10.13 13.475 24.544 1 17.15 ? O6 BDF 102 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 361 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 12 #