data_8C9Z
#
_model_server_result.job_id            B4sTDjUTfST6gN05OHOWhw 
_model_server_result.datetime_utc      '2025-01-25 10:42:10' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8c9z 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":105}' 
#
_entry.id    8C9Z 
#
_exptl.entry_id    8C9Z 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          4 
_entity.src_method                  nat 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            8C9Z 
_cell.length_a            76.114 
_cell.length_b            76.114 
_cell.length_c            113.649 
_cell.Z_PDB               18 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8C9Z 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        155 
_symmetry.space_group_name_Hall    'R 3 2"' 
_symmetry.space_group_name_H-M     'H 3 2' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 F N N 
? 4 G N N 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 305 n n 
C1 C2 GOL sing 306 n n 
C1 H11 GOL sing 307 n n 
C1 H12 GOL sing 308 n n 
O1 HO1 GOL sing 309 n n 
C2 O2 GOL sing 310 n n 
C2 C3 GOL sing 311 n n 
C2 H2 GOL sing 312 n n 
O2 HO2 GOL sing 313 n n 
C3 O3 GOL sing 314 n n 
C3 H31 GOL sing 315 n n 
C3 H32 GOL sing 316 n n 
O3 HO3 GOL sing 317 n n 
#
_atom_sites.entry_id                     8C9Z 
_atom_sites.fract_transf_matrix[1][1]    0.013138 
_atom_sites.fract_transf_matrix[1][2]    0.007585 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.015171 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008799 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 BDF A 1 101 101 BDF BDF . 
C 2 BDF A 1 102 201 BDF BDF . 
D 3 EVB A 1 103 301 EVB EVB . 
E 3 EVB A 1 104 401 EVB EVB . 
F 4 GOL A 1 105 501 GOL GOL . 
G 4 GOL A 1 106 601 GOL GOL . 
H 5 HOH A 1 201 4 HOH HOH . 
H 5 HOH A 2 202 112 HOH HOH . 
H 5 HOH A 3 203 127 HOH HOH . 
H 5 HOH A 4 204 74 HOH HOH . 
H 5 HOH A 5 205 109 HOH HOH . 
H 5 HOH A 6 206 131 HOH HOH . 
H 5 HOH A 7 207 103 HOH HOH . 
H 5 HOH A 8 208 13 HOH HOH . 
H 5 HOH A 9 209 122 HOH HOH . 
H 5 HOH A 10 210 88 HOH HOH . 
H 5 HOH A 11 211 120 HOH HOH . 
H 5 HOH A 12 212 22 HOH HOH . 
H 5 HOH A 13 213 67 HOH HOH . 
H 5 HOH A 14 214 2 HOH HOH . 
H 5 HOH A 15 215 3 HOH HOH . 
H 5 HOH A 16 216 87 HOH HOH . 
H 5 HOH A 17 217 119 HOH HOH . 
H 5 HOH A 18 218 43 HOH HOH . 
H 5 HOH A 19 219 89 HOH HOH . 
H 5 HOH A 20 220 15 HOH HOH . 
H 5 HOH A 21 221 64 HOH HOH . 
H 5 HOH A 22 222 44 HOH HOH . 
H 5 HOH A 23 223 8 HOH HOH . 
H 5 HOH A 24 224 7 HOH HOH . 
H 5 HOH A 25 225 37 HOH HOH . 
H 5 HOH A 26 226 31 HOH HOH . 
H 5 HOH A 27 227 16 HOH HOH . 
H 5 HOH A 28 228 36 HOH HOH . 
H 5 HOH A 29 229 27 HOH HOH . 
H 5 HOH A 30 230 10 HOH HOH . 
H 5 HOH A 31 231 11 HOH HOH . 
H 5 HOH A 32 232 1 HOH HOH . 
H 5 HOH A 33 233 60 HOH HOH . 
H 5 HOH A 34 234 9 HOH HOH . 
H 5 HOH A 35 235 30 HOH HOH . 
H 5 HOH A 36 236 118 HOH HOH . 
H 5 HOH A 37 237 52 HOH HOH . 
H 5 HOH A 38 238 104 HOH HOH . 
H 5 HOH A 39 239 92 HOH HOH . 
H 5 HOH A 40 240 86 HOH HOH . 
H 5 HOH A 41 241 55 HOH HOH . 
H 5 HOH A 42 242 121 HOH HOH . 
H 5 HOH A 43 243 20 HOH HOH . 
H 5 HOH A 44 244 113 HOH HOH . 
H 5 HOH A 45 245 128 HOH HOH . 
H 5 HOH A 46 246 29 HOH HOH . 
H 5 HOH A 47 247 56 HOH HOH . 
H 5 HOH A 48 248 69 HOH HOH . 
H 5 HOH A 49 249 14 HOH HOH . 
H 5 HOH A 50 250 39 HOH HOH . 
H 5 HOH A 51 251 129 HOH HOH . 
H 5 HOH A 52 252 125 HOH HOH . 
H 5 HOH A 53 253 136 HOH HOH . 
H 5 HOH A 54 254 135 HOH HOH . 
H 5 HOH A 55 255 93 HOH HOH . 
H 5 HOH A 56 256 42 HOH HOH . 
H 5 HOH A 57 257 5 HOH HOH . 
H 5 HOH A 58 258 59 HOH HOH . 
H 5 HOH A 59 259 101 HOH HOH . 
H 5 HOH A 60 260 71 HOH HOH . 
H 5 HOH A 61 261 6 HOH HOH . 
H 5 HOH A 62 262 46 HOH HOH . 
H 5 HOH A 63 263 35 HOH HOH . 
H 5 HOH A 64 264 81 HOH HOH . 
H 5 HOH A 65 265 33 HOH HOH . 
H 5 HOH A 66 266 126 HOH HOH . 
H 5 HOH A 67 267 17 HOH HOH . 
H 5 HOH A 68 268 58 HOH HOH . 
H 5 HOH A 69 269 32 HOH HOH . 
H 5 HOH A 70 270 45 HOH HOH . 
H 5 HOH A 71 271 61 HOH HOH . 
H 5 HOH A 72 272 124 HOH HOH . 
H 5 HOH A 73 273 105 HOH HOH . 
H 5 HOH A 74 274 25 HOH HOH . 
H 5 HOH A 75 275 40 HOH HOH . 
H 5 HOH A 76 276 51 HOH HOH . 
H 5 HOH A 77 277 75 HOH HOH . 
H 5 HOH A 78 278 98 HOH HOH . 
H 5 HOH A 79 279 95 HOH HOH . 
H 5 HOH A 80 280 137 HOH HOH . 
H 5 HOH A 81 281 134 HOH HOH . 
H 5 HOH A 82 282 23 HOH HOH . 
H 5 HOH A 83 283 57 HOH HOH . 
H 5 HOH A 84 284 18 HOH HOH . 
H 5 HOH A 85 285 12 HOH HOH . 
H 5 HOH A 86 286 21 HOH HOH . 
H 5 HOH A 87 287 133 HOH HOH . 
H 5 HOH A 88 288 91 HOH HOH . 
H 5 HOH A 89 289 132 HOH HOH . 
H 5 HOH A 90 290 90 HOH HOH . 
H 5 HOH A 91 291 110 HOH HOH . 
H 5 HOH A 92 292 24 HOH HOH . 
H 5 HOH A 93 293 138 HOH HOH . 
H 5 HOH A 94 294 106 HOH HOH . 
H 5 HOH A 95 295 130 HOH HOH . 
H 5 HOH A 96 296 49 HOH HOH . 
H 5 HOH A 97 297 111 HOH HOH . 
H 5 HOH A 98 298 38 HOH HOH . 
H 5 HOH A 99 299 123 HOH HOH . 
H 5 HOH A 100 300 34 HOH HOH . 
H 5 HOH A 101 301 85 HOH HOH . 
H 5 HOH A 102 302 47 HOH HOH . 
H 5 HOH A 103 303 53 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . F 4 11.562 12.989 11.064 0.7 26.61 ? C1 GOL 105 A 1 
HETATM 2 O O1 GOL . . . F 4 10.801 14.152 11.13 0.7 38.76 ? O1 GOL 105 A 1 
HETATM 3 C C2 GOL . . . F 4 10.801 12.024 10.141 0.7 30.26 ? C2 GOL 105 A 1 
HETATM 4 O O2 GOL . . . F 4 10.411 12.643 8.966 0.7 41.13 ? O2 GOL 105 A 1 
HETATM 5 C C3 GOL . . . F 4 11.78 10.855 9.891 0.7 27.28 ? C3 GOL 105 A 1 
HETATM 6 O O3 GOL . . . F 4 11.08 9.888 9.177 0.7 38.84 ? O3 GOL 105 A 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           328 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           6 
#