data_8CAY # _model_server_result.job_id ldTeZmO2ffsbOiZee684Lw _model_server_result.datetime_utc '2024-11-02 04:31:24' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8cay # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":605}' # _entry.id 8CAY # _exptl.entry_id 8CAY _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 22.99 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SODIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 114.43 _cell.angle_gamma 90 _cell.entry_id 8CAY _cell.length_a 107.1 _cell.length_b 40.209 _cell.length_c 103.425 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8CAY _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 333 A ASP 363 1_555 E NA NA . A NA 606 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.101 ? metalc ? metalc2 A OH TYR 466 A TYR 496 1_555 D NA NA . A NA 605 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.089 ? metalc ? metalc3 A O THR 481 A THR 511 1_555 D NA NA . A NA 605 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.567 ? metalc ? metalc4 D NA NA . A NA 605 1_555 G O HOH . A HOH 811 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.095 ? # _chem_comp.formula 'Na 1' _chem_comp.formula_weight 22.99 _chem_comp.id NA _chem_comp.mon_nstd_flag . _chem_comp.name 'SODIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 8CAY _atom_sites.fract_transf_matrix[1][1] 0.009337 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004241 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.02487 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01062 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 Y4H A 1 601 1 Y4H GLC . C 3 Y45 A 1 603 3 Y45 GLC . D 4 NA A 1 605 1 NA NA . E 4 NA A 1 606 2 NA NA . F 5 PEG A 1 607 1 PEG PEG . G 6 HOH A 1 701 229 HOH HOH . G 6 HOH A 2 702 68 HOH HOH . G 6 HOH A 3 703 253 HOH HOH . G 6 HOH A 4 704 90 HOH HOH . G 6 HOH A 5 705 62 HOH HOH . G 6 HOH A 6 706 190 HOH HOH . G 6 HOH A 7 707 73 HOH HOH . G 6 HOH A 8 708 244 HOH HOH . G 6 HOH A 9 709 199 HOH HOH . G 6 HOH A 10 710 209 HOH HOH . G 6 HOH A 11 711 134 HOH HOH . G 6 HOH A 12 712 26 HOH HOH . G 6 HOH A 13 713 70 HOH HOH . G 6 HOH A 14 714 86 HOH HOH . G 6 HOH A 15 715 137 HOH HOH . G 6 HOH A 16 716 82 HOH HOH . G 6 HOH A 17 717 127 HOH HOH . G 6 HOH A 18 718 42 HOH HOH . G 6 HOH A 19 719 8 HOH HOH . G 6 HOH A 20 720 29 HOH HOH . G 6 HOH A 21 721 164 HOH HOH . G 6 HOH A 22 722 246 HOH HOH . G 6 HOH A 23 723 120 HOH HOH . G 6 HOH A 24 724 50 HOH HOH . G 6 HOH A 25 725 231 HOH HOH . G 6 HOH A 26 726 21 HOH HOH . G 6 HOH A 27 727 172 HOH HOH . G 6 HOH A 28 728 146 HOH HOH . G 6 HOH A 29 729 100 HOH HOH . G 6 HOH A 30 730 88 HOH HOH . G 6 HOH A 31 731 136 HOH HOH . G 6 HOH A 32 732 89 HOH HOH . G 6 HOH A 33 733 39 HOH HOH . G 6 HOH A 34 734 156 HOH HOH . G 6 HOH A 35 735 91 HOH HOH . G 6 HOH A 36 736 69 HOH HOH . G 6 HOH A 37 737 205 HOH HOH . G 6 HOH A 38 738 215 HOH HOH . G 6 HOH A 39 739 128 HOH HOH . G 6 HOH A 40 740 101 HOH HOH . G 6 HOH A 41 741 104 HOH HOH . G 6 HOH A 42 742 131 HOH HOH . G 6 HOH A 43 743 93 HOH HOH . G 6 HOH A 44 744 140 HOH HOH . G 6 HOH A 45 745 188 HOH HOH . G 6 HOH A 46 746 214 HOH HOH . G 6 HOH A 47 747 45 HOH HOH . G 6 HOH A 48 748 217 HOH HOH . G 6 HOH A 49 749 17 HOH HOH . G 6 HOH A 50 750 147 HOH HOH . G 6 HOH A 51 751 75 HOH HOH . G 6 HOH A 52 752 61 HOH HOH . G 6 HOH A 53 753 11 HOH HOH . G 6 HOH A 54 754 28 HOH HOH . G 6 HOH A 55 755 63 HOH HOH . G 6 HOH A 56 756 151 HOH HOH . G 6 HOH A 57 757 133 HOH HOH . G 6 HOH A 58 758 125 HOH HOH . G 6 HOH A 59 759 37 HOH HOH . G 6 HOH A 60 760 31 HOH HOH . G 6 HOH A 61 761 13 HOH HOH . G 6 HOH A 62 762 7 HOH HOH . G 6 HOH A 63 763 179 HOH HOH . G 6 HOH A 64 764 184 HOH HOH . G 6 HOH A 65 765 30 HOH HOH . G 6 HOH A 66 766 10 HOH HOH . G 6 HOH A 67 767 221 HOH HOH . G 6 HOH A 68 768 165 HOH HOH . G 6 HOH A 69 769 23 HOH HOH . G 6 HOH A 70 770 64 HOH HOH . G 6 HOH A 71 771 76 HOH HOH . G 6 HOH A 72 772 103 HOH HOH . G 6 HOH A 73 773 34 HOH HOH . G 6 HOH A 74 774 1 HOH HOH . G 6 HOH A 75 775 24 HOH HOH . G 6 HOH A 76 776 14 HOH HOH . G 6 HOH A 77 777 102 HOH HOH . G 6 HOH A 78 778 85 HOH HOH . G 6 HOH A 79 779 124 HOH HOH . G 6 HOH A 80 780 2 HOH HOH . G 6 HOH A 81 781 185 HOH HOH . G 6 HOH A 82 782 157 HOH HOH . G 6 HOH A 83 783 48 HOH HOH . G 6 HOH A 84 784 44 HOH HOH . G 6 HOH A 85 785 57 HOH HOH . G 6 HOH A 86 786 114 HOH HOH . G 6 HOH A 87 787 9 HOH HOH . G 6 HOH A 88 788 112 HOH HOH . G 6 HOH A 89 789 207 HOH HOH . G 6 HOH A 90 790 12 HOH HOH . G 6 HOH A 91 791 158 HOH HOH . G 6 HOH A 92 792 78 HOH HOH . G 6 HOH A 93 793 167 HOH HOH . G 6 HOH A 94 794 15 HOH HOH . G 6 HOH A 95 795 54 HOH HOH . G 6 HOH A 96 796 51 HOH HOH . G 6 HOH A 97 797 67 HOH HOH . G 6 HOH A 98 798 47 HOH HOH . G 6 HOH A 99 799 18 HOH HOH . G 6 HOH A 100 800 52 HOH HOH . G 6 HOH A 101 801 257 HOH HOH . G 6 HOH A 102 802 163 HOH HOH . G 6 HOH A 103 803 208 HOH HOH . G 6 HOH A 104 804 121 HOH HOH . G 6 HOH A 105 805 55 HOH HOH . G 6 HOH A 106 806 142 HOH HOH . G 6 HOH A 107 807 161 HOH HOH . G 6 HOH A 108 808 218 HOH HOH . G 6 HOH A 109 809 3 HOH HOH . G 6 HOH A 110 810 77 HOH HOH . G 6 HOH A 111 811 25 HOH HOH . G 6 HOH A 112 812 71 HOH HOH . G 6 HOH A 113 813 192 HOH HOH . G 6 HOH A 114 814 98 HOH HOH . G 6 HOH A 115 815 32 HOH HOH . G 6 HOH A 116 816 6 HOH HOH . G 6 HOH A 117 817 122 HOH HOH . G 6 HOH A 118 818 16 HOH HOH . G 6 HOH A 119 819 66 HOH HOH . G 6 HOH A 120 820 80 HOH HOH . G 6 HOH A 121 821 234 HOH HOH . G 6 HOH A 122 822 173 HOH HOH . G 6 HOH A 123 823 19 HOH HOH . G 6 HOH A 124 824 256 HOH HOH . G 6 HOH A 125 825 233 HOH HOH . G 6 HOH A 126 826 43 HOH HOH . G 6 HOH A 127 827 53 HOH HOH . G 6 HOH A 128 828 225 HOH HOH . G 6 HOH A 129 829 210 HOH HOH . G 6 HOH A 130 830 41 HOH HOH . G 6 HOH A 131 831 65 HOH HOH . G 6 HOH A 132 832 154 HOH HOH . G 6 HOH A 133 833 139 HOH HOH . G 6 HOH A 134 834 211 HOH HOH . G 6 HOH A 135 835 237 HOH HOH . G 6 HOH A 136 836 20 HOH HOH . G 6 HOH A 137 837 38 HOH HOH . G 6 HOH A 138 838 177 HOH HOH . G 6 HOH A 139 839 118 HOH HOH . G 6 HOH A 140 840 181 HOH HOH . G 6 HOH A 141 841 4 HOH HOH . G 6 HOH A 142 842 5 HOH HOH . G 6 HOH A 143 843 198 HOH HOH . G 6 HOH A 144 844 241 HOH HOH . G 6 HOH A 145 845 216 HOH HOH . G 6 HOH A 146 846 129 HOH HOH . G 6 HOH A 147 847 40 HOH HOH . G 6 HOH A 148 848 36 HOH HOH . G 6 HOH A 149 849 189 HOH HOH . G 6 HOH A 150 850 107 HOH HOH . G 6 HOH A 151 851 168 HOH HOH . G 6 HOH A 152 852 153 HOH HOH . G 6 HOH A 153 853 22 HOH HOH . G 6 HOH A 154 854 191 HOH HOH . G 6 HOH A 155 855 242 HOH HOH . G 6 HOH A 156 856 155 HOH HOH . G 6 HOH A 157 857 56 HOH HOH . G 6 HOH A 158 858 46 HOH HOH . G 6 HOH A 159 859 149 HOH HOH . G 6 HOH A 160 860 152 HOH HOH . G 6 HOH A 161 861 180 HOH HOH . G 6 HOH A 162 862 97 HOH HOH . G 6 HOH A 163 863 35 HOH HOH . G 6 HOH A 164 864 148 HOH HOH . G 6 HOH A 165 865 135 HOH HOH . G 6 HOH A 166 866 159 HOH HOH . G 6 HOH A 167 867 202 HOH HOH . G 6 HOH A 168 868 254 HOH HOH . G 6 HOH A 169 869 143 HOH HOH . G 6 HOH A 170 870 166 HOH HOH . G 6 HOH A 171 871 250 HOH HOH . G 6 HOH A 172 872 162 HOH HOH . G 6 HOH A 173 873 108 HOH HOH . G 6 HOH A 174 874 187 HOH HOH . G 6 HOH A 175 875 49 HOH HOH . G 6 HOH A 176 876 138 HOH HOH . G 6 HOH A 177 877 171 HOH HOH . G 6 HOH A 178 878 60 HOH HOH . G 6 HOH A 179 879 95 HOH HOH . G 6 HOH A 180 880 96 HOH HOH . G 6 HOH A 181 881 201 HOH HOH . G 6 HOH A 182 882 252 HOH HOH . G 6 HOH A 183 883 243 HOH HOH . G 6 HOH A 184 884 83 HOH HOH . G 6 HOH A 185 885 186 HOH HOH . G 6 HOH A 186 886 72 HOH HOH . G 6 HOH A 187 887 113 HOH HOH . G 6 HOH A 188 888 183 HOH HOH . G 6 HOH A 189 889 145 HOH HOH . G 6 HOH A 190 890 248 HOH HOH . G 6 HOH A 191 891 232 HOH HOH . G 6 HOH A 192 892 94 HOH HOH . G 6 HOH A 193 893 144 HOH HOH . G 6 HOH A 194 894 105 HOH HOH . G 6 HOH A 195 895 178 HOH HOH . G 6 HOH A 196 896 126 HOH HOH . G 6 HOH A 197 897 33 HOH HOH . G 6 HOH A 198 898 130 HOH HOH . G 6 HOH A 199 899 99 HOH HOH . G 6 HOH A 200 900 115 HOH HOH . G 6 HOH A 201 901 230 HOH HOH . G 6 HOH A 202 902 87 HOH HOH . G 6 HOH A 203 903 150 HOH HOH . G 6 HOH A 204 904 84 HOH HOH . G 6 HOH A 205 905 59 HOH HOH . G 6 HOH A 206 906 92 HOH HOH . G 6 HOH A 207 907 204 HOH HOH . G 6 HOH A 208 908 240 HOH HOH . G 6 HOH A 209 909 239 HOH HOH . G 6 HOH A 210 910 123 HOH HOH . G 6 HOH A 211 911 182 HOH HOH . G 6 HOH A 212 912 160 HOH HOH . G 6 HOH A 213 913 226 HOH HOH . G 6 HOH A 214 914 206 HOH HOH . G 6 HOH A 215 915 197 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol NA _atom_site.label_atom_id NA _atom_site.label_comp_id NA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 4 _atom_site.Cartn_x 1.151 _atom_site.Cartn_y -13.855 _atom_site.Cartn_z 27.517 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 18.97 _atom_site.pdbx_formal_charge 1 _atom_site.auth_atom_id NA _atom_site.auth_comp_id NA _atom_site.auth_seq_id 605 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 33 _model_server_stats.parse_time_ms 35 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 296 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #