data_8CBU
#
_model_server_result.job_id            23JM-KOML7wKGyyxtnnBqg 
_model_server_result.datetime_utc      '2024-11-15 11:24:56' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8cbu 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"N","auth_seq_id":602}' 
#
_entry.id    8CBU 
#
_exptl.entry_id    8CBU 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              150.173 
_entity.id                          6 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'TRIETHYLENE GLYCOL' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          100.72 
_cell.angle_gamma         90 
_cell.entry_id            8CBU 
_cell.length_a            52.847 
_cell.length_b            63.559 
_cell.length_c            69.596 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8CBU 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    'P 2yb' 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      6 
_struct_asym.id                             N 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 B OD1 ASP 85 B ASP 64 1_555 K MG MG . B MG 506 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.072 ? 
metalc ? metalc2 B OD2 ASP 137 B ASP 116 1_555 K MG MG . B MG 506 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.06 ? 
metalc ? metalc3 K MG MG . B MG 506 1_555 S O HOH . B HOH 610 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.179 ? 
metalc ? metalc4 K MG MG . B MG 506 1_555 S O HOH . B HOH 613 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.169 ? 
metalc ? metalc5 K MG MG . B MG 506 1_555 S O HOH . B HOH 621 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.212 ? 
metalc ? metalc6 K MG MG . B MG 506 1_555 S O HOH . B HOH 642 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.152 ? 
metalc ? metalc7 D OD1 ASP 85 D ASP 64 1_555 Q MG MG . D MG 605 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.094 ? 
metalc ? metalc8 D OD2 ASP 137 D ASP 116 1_555 Q MG MG . D MG 605 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.06 ? 
metalc ? metalc9 Q MG MG . D MG 605 1_555 U O HOH . D HOH 715 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.173 ? 
metalc ? metalc10 Q MG MG . D MG 605 1_555 U O HOH . D HOH 720 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.092 ? 
metalc ? metalc11 Q MG MG . D MG 605 1_555 U O HOH . D HOH 728 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.203 ? 
metalc ? metalc12 Q MG MG . D MG 605 1_555 U O HOH . D HOH 741 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.129 ? 
#
_chem_comp.formula           'C6 H14 O4' 
_chem_comp.formula_weight    150.173 
_chem_comp.id                PGE 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'TRIETHYLENE GLYCOL' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 PGE sing 246 n n 
C1 C2 PGE sing 247 n n 
C1 H1 PGE sing 248 n n 
C1 H12 PGE sing 249 n n 
O1 HO1 PGE sing 250 n n 
C2 O2 PGE sing 251 n n 
C2 H2 PGE sing 252 n n 
C2 H22 PGE sing 253 n n 
O2 C3 PGE sing 254 n n 
C3 C4 PGE sing 255 n n 
C3 H3 PGE sing 256 n n 
C3 H32 PGE sing 257 n n 
C4 O3 PGE sing 258 n n 
C4 H4 PGE sing 259 n n 
C4 H42 PGE sing 260 n n 
O4 C6 PGE sing 261 n n 
O4 HO4 PGE sing 262 n n 
C6 C5 PGE sing 263 n n 
C6 H6 PGE sing 264 n n 
C6 H62 PGE sing 265 n n 
C5 O3 PGE sing 266 n n 
C5 H5 PGE sing 267 n n 
C5 H52 PGE sing 268 n n 
#
_atom_sites.entry_id                     8CBU 
_atom_sites.fract_transf_matrix[1][1]    0.018923 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.003582 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.015733 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.014624 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 CL A 1 501 1 CL CL . 
F 3 EDO B 1 501 501 EDO EDO . 
G 3 EDO B 1 502 801 EDO EDO . 
H 3 EDO B 1 503 902 EDO EDO . 
I 3 EDO B 1 504 903 EDO EDO . 
J 4 U60 B 1 505 401 U60 LIG . 
K 5 MG B 1 506 1 MG MG . 
L 3 EDO C 1 501 905 EDO EDO . 
M 4 U60 D 1 601 601 U60 LIG . 
N 6 PGE D 1 602 402 PGE PGE . 
O 3 EDO D 1 603 901 EDO EDO . 
P 3 EDO D 1 604 904 EDO EDO . 
Q 5 MG D 1 605 2 MG MG . 
R 7 HOH A 1 601 123 HOH HOH . 
R 7 HOH A 2 602 36 HOH HOH . 
R 7 HOH A 3 603 89 HOH HOH . 
R 7 HOH A 4 604 114 HOH HOH . 
R 7 HOH A 5 605 101 HOH HOH . 
R 7 HOH A 6 606 103 HOH HOH . 
R 7 HOH A 7 607 105 HOH HOH . 
R 7 HOH A 8 608 104 HOH HOH . 
S 7 HOH B 1 601 86 HOH HOH . 
S 7 HOH B 2 602 19 HOH HOH . 
S 7 HOH B 3 603 73 HOH HOH . 
S 7 HOH B 4 604 21 HOH HOH . 
S 7 HOH B 5 605 90 HOH HOH . 
S 7 HOH B 6 606 115 HOH HOH . 
S 7 HOH B 7 607 10 HOH HOH . 
S 7 HOH B 8 608 9 HOH HOH . 
S 7 HOH B 9 609 48 HOH HOH . 
S 7 HOH B 10 610 14 HOH HOH . 
S 7 HOH B 11 611 18 HOH HOH . 
S 7 HOH B 12 612 3 HOH HOH . 
S 7 HOH B 13 613 12 HOH HOH . 
S 7 HOH B 14 614 119 HOH HOH . 
S 7 HOH B 15 615 56 HOH HOH . 
S 7 HOH B 16 616 110 HOH HOH . 
S 7 HOH B 17 617 57 HOH HOH . 
S 7 HOH B 18 618 4 HOH HOH . 
S 7 HOH B 19 619 2 HOH HOH . 
S 7 HOH B 20 620 92 HOH HOH . 
S 7 HOH B 21 621 13 HOH HOH . 
S 7 HOH B 22 622 71 HOH HOH . 
S 7 HOH B 23 623 47 HOH HOH . 
S 7 HOH B 24 624 1 HOH HOH . 
S 7 HOH B 25 625 88 HOH HOH . 
S 7 HOH B 26 626 111 HOH HOH . 
S 7 HOH B 27 627 62 HOH HOH . 
S 7 HOH B 28 628 7 HOH HOH . 
S 7 HOH B 29 629 5 HOH HOH . 
S 7 HOH B 30 630 85 HOH HOH . 
S 7 HOH B 31 631 75 HOH HOH . 
S 7 HOH B 32 632 72 HOH HOH . 
S 7 HOH B 33 633 6 HOH HOH . 
S 7 HOH B 34 634 64 HOH HOH . 
S 7 HOH B 35 635 63 HOH HOH . 
S 7 HOH B 36 636 61 HOH HOH . 
S 7 HOH B 37 637 93 HOH HOH . 
S 7 HOH B 38 638 39 HOH HOH . 
S 7 HOH B 39 639 94 HOH HOH . 
S 7 HOH B 40 640 59 HOH HOH . 
S 7 HOH B 41 641 87 HOH HOH . 
S 7 HOH B 42 642 11 HOH HOH . 
S 7 HOH B 43 643 84 HOH HOH . 
S 7 HOH B 44 644 54 HOH HOH . 
S 7 HOH B 45 645 42 HOH HOH . 
S 7 HOH B 46 646 41 HOH HOH . 
S 7 HOH B 47 647 91 HOH HOH . 
S 7 HOH B 48 648 50 HOH HOH . 
S 7 HOH B 49 649 116 HOH HOH . 
S 7 HOH B 50 650 40 HOH HOH . 
S 7 HOH B 51 651 122 HOH HOH . 
T 7 HOH C 1 601 8 HOH HOH . 
T 7 HOH C 2 602 83 HOH HOH . 
T 7 HOH C 3 603 106 HOH HOH . 
T 7 HOH C 4 604 107 HOH HOH . 
T 7 HOH C 5 605 79 HOH HOH . 
T 7 HOH C 6 606 81 HOH HOH . 
T 7 HOH C 7 607 109 HOH HOH . 
T 7 HOH C 8 608 108 HOH HOH . 
T 7 HOH C 9 609 38 HOH HOH . 
T 7 HOH C 10 610 80 HOH HOH . 
T 7 HOH C 11 611 82 HOH HOH . 
U 7 HOH D 1 701 37 HOH HOH . 
U 7 HOH D 2 702 20 HOH HOH . 
U 7 HOH D 3 703 44 HOH HOH . 
U 7 HOH D 4 704 102 HOH HOH . 
U 7 HOH D 5 705 22 HOH HOH . 
U 7 HOH D 6 706 45 HOH HOH . 
U 7 HOH D 7 707 32 HOH HOH . 
U 7 HOH D 8 708 95 HOH HOH . 
U 7 HOH D 9 709 31 HOH HOH . 
U 7 HOH D 10 710 55 HOH HOH . 
U 7 HOH D 11 711 23 HOH HOH . 
U 7 HOH D 12 712 60 HOH HOH . 
U 7 HOH D 13 713 35 HOH HOH . 
U 7 HOH D 14 714 15 HOH HOH . 
U 7 HOH D 15 715 25 HOH HOH . 
U 7 HOH D 16 716 117 HOH HOH . 
U 7 HOH D 17 717 43 HOH HOH . 
U 7 HOH D 18 718 68 HOH HOH . 
U 7 HOH D 19 719 33 HOH HOH . 
U 7 HOH D 20 720 27 HOH HOH . 
U 7 HOH D 21 721 52 HOH HOH . 
U 7 HOH D 22 722 29 HOH HOH . 
U 7 HOH D 23 723 65 HOH HOH . 
U 7 HOH D 24 724 16 HOH HOH . 
U 7 HOH D 25 725 58 HOH HOH . 
U 7 HOH D 26 726 28 HOH HOH . 
U 7 HOH D 27 727 74 HOH HOH . 
U 7 HOH D 28 728 96 HOH HOH . 
U 7 HOH D 29 729 113 HOH HOH . 
U 7 HOH D 30 730 100 HOH HOH . 
U 7 HOH D 31 731 118 HOH HOH . 
U 7 HOH D 32 732 17 HOH HOH . 
U 7 HOH D 33 733 78 HOH HOH . 
U 7 HOH D 34 734 51 HOH HOH . 
U 7 HOH D 35 735 99 HOH HOH . 
U 7 HOH D 36 736 49 HOH HOH . 
U 7 HOH D 37 737 66 HOH HOH . 
U 7 HOH D 38 738 34 HOH HOH . 
U 7 HOH D 39 739 24 HOH HOH . 
U 7 HOH D 40 740 76 HOH HOH . 
U 7 HOH D 41 741 120 HOH HOH . 
U 7 HOH D 42 742 67 HOH HOH . 
U 7 HOH D 43 743 121 HOH HOH . 
U 7 HOH D 44 744 30 HOH HOH . 
U 7 HOH D 45 745 98 HOH HOH . 
U 7 HOH D 46 746 69 HOH HOH . 
U 7 HOH D 47 747 112 HOH HOH . 
U 7 HOH D 48 748 26 HOH HOH . 
U 7 HOH D 49 749 46 HOH HOH . 
U 7 HOH D 50 750 77 HOH HOH . 
U 7 HOH D 51 751 53 HOH HOH . 
U 7 HOH D 52 752 97 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 PGE . . . N 6 29.21 -19.335 9.763 1 67.79 ? C1 PGE 602 D 1 
HETATM 2 O O1 PGE . . . N 6 28.26 -18.282 9.864 1 59.79 ? O1 PGE 602 D 1 
HETATM 3 C C2 PGE . . . N 6 28.473 -20.659 9.731 1 59.25 ? C2 PGE 602 D 1 
HETATM 4 O O2 PGE . . . N 6 27.776 -20.783 8.507 1 72.73 ? O2 PGE 602 D 1 
HETATM 5 C C3 PGE . . . N 6 26.367 -20.779 8.636 1 63.22 ? C3 PGE 602 D 1 
HETATM 6 C C4 PGE . . . N 6 25.924 -21.995 9.427 1 58.66 ? C4 PGE 602 D 1 
HETATM 7 O O4 PGE . . . N 6 27.1 -23.442 12.527 1 47.63 ? O4 PGE 602 D 1 
HETATM 8 C C6 PGE . . . N 6 25.856 -22.825 12.828 1 50.91 ? C6 PGE 602 D 1 
HETATM 9 C C5 PGE . . . N 6 25.078 -22.629 11.544 1 47.78 ? C5 PGE 602 D 1 
HETATM 10 O O3 PGE . . . N 6 25.687 -21.616 10.77 1 66.7 ? O3 PGE 602 D 1 
#
_model_server_stats.io_time_ms              32 
_model_server_stats.parse_time_ms           43 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           482 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           10 
#