data_8CCD # _model_server_result.job_id oqg8_MUibn2CoaLPz_Sgng _model_server_result.datetime_utc '2024-10-18 12:27:33' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8ccd # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 8CCD # _exptl.entry_id 8CCD _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 782.295 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '2-[3-[(1~{R})-1-[(2~{S})-1-[(2~{S})-2-(5-chloranylthiophen-2-yl)-2-(3,4,5-trimethoxyphenyl)ethanoyl]piperidin-2-yl]carbonyloxy-3-(3,4-dimethoxyphenyl)propyl]phenoxy]ethanoic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8CCD _cell.length_a 45.556 _cell.length_b 48.123 _cell.length_c 57.156 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8CCD _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C40 H44 Cl N O11 S' _chem_comp.formula_weight 782.295 _chem_comp.id UCO _chem_comp.mon_nstd_flag . _chem_comp.name '2-[3-[(1~{R})-1-[(2~{S})-1-[(2~{S})-2-(5-chloranylthiophen-2-yl)-2-(3,4,5-trimethoxyphenyl)ethanoyl]piperidin-2-yl]carbonyloxy-3-(3,4-dimethoxyphenyl)propyl]phenoxy]ethanoic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CLBQ CBO UCO sing 358 n n CBO SBP UCO sing 359 n y CBO CBN UCO doub 360 n y SBP CBL UCO sing 361 n y CBN CBM UCO sing 362 n y OBI CBH UCO doub 363 n n CBL CBM UCO doub 364 n y CBL CBJ UCO sing 365 n n CB CA UCO sing 366 n n CB CBD UCO sing 367 n n CBH CBJ UCO sing 368 n n CBH N UCO sing 369 n n CA N UCO sing 370 n n CA C UCO sing 371 n n CBJ CBK UCO sing 372 n n N CBF UCO sing 373 n n CAJ OAI UCO sing 374 n n CBD CBE UCO sing 375 n n O C UCO doub 376 n n C OAO UCO sing 377 n n CBE CBF UCO sing 378 n n OAI CAB UCO sing 379 n n CBK CBV UCO doub 380 n y CBK CBR UCO sing 381 n y CBV CBU UCO sing 382 n y OAO CAM UCO sing 383 n n CCB OBW UCO sing 384 n n OAG CAH UCO sing 385 n n OAG CAA UCO sing 386 n n CAB CAA UCO doub 387 n y CAB CAC UCO sing 388 n y CBR CBS UCO doub 389 n y CAA CAF UCO sing 390 n y CBU OBW UCO sing 391 n n CBU CBT UCO doub 392 n y CAC CAD UCO doub 393 n y CAM CAL UCO sing 394 n n CAM CAN UCO sing 395 n n CAL CAK UCO sing 396 n n CAF CAE UCO doub 397 n y CBS CBT UCO sing 398 n y CBS OBY UCO sing 399 n n CBT OBX UCO sing 400 n n CAD CAE UCO sing 401 n y CAD CAK UCO sing 402 n n CAN CAT UCO doub 403 n y CAN CAP UCO sing 404 n y CAT CAS UCO sing 405 n y CBZ OBY UCO sing 406 n n CAP CAQ UCO doub 407 n y OBX CCA UCO sing 408 n n CAS CAR UCO doub 409 n y CAQ CAR UCO sing 410 n y CAQ OAU UCO sing 411 n n OAU CAV UCO sing 412 n n CAV CAW UCO sing 413 n n CAW OAY UCO doub 414 n n CAW OAX UCO sing 415 n n CBZ HB6 UCO sing 416 n n CBZ HB7 UCO sing 417 n n CBZ HBZ UCO sing 418 n n CBR HBR UCO sing 419 n n CCA HCC UCO sing 420 n n CCA HCA UCO sing 421 n n CCA HCB UCO sing 422 n n CCB HCD UCO sing 423 n n CCB HCE UCO sing 424 n n CCB HCF UCO sing 425 n n CBV HBV UCO sing 426 n n CBJ HBJ UCO sing 427 n n CBN HBN UCO sing 428 n n CBM HBM UCO sing 429 n n CBF HB5 UCO sing 430 n n CBF HBF UCO sing 431 n n CBE HB4 UCO sing 432 n n CBE HBE UCO sing 433 n n CBD HB3 UCO sing 434 n n CBD HBD UCO sing 435 n n CB HB2 UCO sing 436 n n CB HB1 UCO sing 437 n n CA HA UCO sing 438 n n CAM HAR UCO sing 439 n n CAP HAS UCO sing 440 n n CAT HAV UCO sing 441 n n CAS HAU UCO sing 442 n n CAR HAT UCO sing 443 n n CAV HAW UCO sing 444 n n CAV HAX UCO sing 445 n n OAX H1 UCO sing 446 n n CAL HAP UCO sing 447 n n CAL HAQ UCO sing 448 n n CAK HAN UCO sing 449 n n CAK HAO UCO sing 450 n n CAC HAC UCO sing 451 n n CAE HAE UCO sing 452 n n CAF HAF UCO sing 453 n n CAH HAJ UCO sing 454 n n CAH HAH UCO sing 455 n n CAH HAI UCO sing 456 n n CAJ HAK UCO sing 457 n n CAJ HAL UCO sing 458 n n CAJ HAM UCO sing 459 n n # _atom_sites.entry_id 8CCD _atom_sites.fract_transf_matrix[1][1] 0.021951 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.02078 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017496 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 UCO A 1 201 201 UCO PDB . C 3 HOH A 1 301 2 HOH HOH . C 3 HOH A 2 302 4 HOH HOH . C 3 HOH A 3 303 1 HOH HOH . C 3 HOH A 4 304 9 HOH HOH . C 3 HOH A 5 305 3 HOH HOH . C 3 HOH A 6 306 5 HOH HOH . C 3 HOH A 7 307 8 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CBZ UCO . . . B 2 11.047 -8.878 -5.207 1 52.09 0 CBZ UCO 201 A 1 HETATM 2 O OBY UCO . . . B 2 12.326 -8.254 -4.984 1 53.07 0 OBY UCO 201 A 1 HETATM 3 C CBS UCO . . . B 2 12.916 -7.606 -6.026 1 54.48 0 CBS UCO 201 A 1 HETATM 4 C CBR UCO . . . B 2 12.281 -7.46 -7.247 1 52.78 0 CBR UCO 201 A 1 HETATM 5 C CBT UCO . . . B 2 14.217 -7.081 -5.876 1 56.76 0 CBT UCO 201 A 1 HETATM 6 O OBX UCO . . . B 2 14.93 -7.2 -4.721 1 59.81 0 OBX UCO 201 A 1 HETATM 7 C CCA UCO . . . B 2 14.252 -7.18 -3.466 1 63.95 0 CCA UCO 201 A 1 HETATM 8 C CBU UCO . . . B 2 14.87 -6.416 -6.922 1 55.85 0 CBU UCO 201 A 1 HETATM 9 O OBW UCO . . . B 2 16.135 -5.944 -6.672 1 52.01 0 OBW UCO 201 A 1 HETATM 10 C CCB UCO . . . B 2 16.599 -5.019 -7.642 1 49.38 0 CCB UCO 201 A 1 HETATM 11 C CBV UCO . . . B 2 14.212 -6.262 -8.139 1 56.02 0 CBV UCO 201 A 1 HETATM 12 C CBK UCO . . . B 2 12.913 -6.784 -8.292 1 56.86 0 CBK UCO 201 A 1 HETATM 13 C CBJ UCO . . . B 2 12.27 -6.675 -9.541 1 56.08 0 CBJ UCO 201 A 1 HETATM 14 C CBL UCO . . . B 2 13.099 -7.518 -10.58 1 63.4 0 CBL UCO 201 A 1 HETATM 15 S SBP UCO . . . B 2 12.845 -7.511 -12.169 1 60.87 0 SBP UCO 201 A 1 HETATM 16 C CBO UCO . . . B 2 13.984 -8.565 -12.523 1 65.97 0 CBO UCO 201 A 1 HETATM 17 CL CLBQ UCO . . . B 2 14.328 -9.115 -14.169 1 67.69 0 CLBQ UCO 201 A 1 HETATM 18 C CBN UCO . . . B 2 14.615 -8.97 -11.407 1 66.8 0 CBN UCO 201 A 1 HETATM 19 C CBM UCO . . . B 2 14.114 -8.378 -10.308 1 64.91 0 CBM UCO 201 A 1 HETATM 20 C CBH UCO . . . B 2 12.092 -5.213 -9.982 1 51.29 0 CBH UCO 201 A 1 HETATM 21 O OBI UCO . . . B 2 12.823 -4.756 -10.854 1 46.89 0 OBI UCO 201 A 1 HETATM 22 N N UCO . . . B 2 11.096 -4.513 -9.409 1 45.24 0 N UCO 201 A 1 HETATM 23 C CBF UCO . . . B 2 10.175 -5.037 -8.387 1 43.38 0 CBF UCO 201 A 1 HETATM 24 C CBE UCO . . . B 2 8.817 -4.809 -8.808 1 39.21 0 CBE UCO 201 A 1 HETATM 25 C CBD UCO . . . B 2 8.621 -3.377 -8.948 1 38.84 0 CBD UCO 201 A 1 HETATM 26 C CB UCO . . . B 2 9.394 -2.847 -10.103 1 40.49 0 CB UCO 201 A 1 HETATM 27 C CA UCO . . . B 2 10.918 -3.101 -9.786 1 43.79 0 CA UCO 201 A 1 HETATM 28 C C UCO . . . B 2 11.5 -2.194 -8.809 1 44.93 0 C UCO 201 A 1 HETATM 29 O O UCO . . . B 2 11.279 -0.994 -8.86 1 45.93 0 O UCO 201 A 1 HETATM 30 O OAO UCO . . . B 2 12.383 -2.69 -7.895 1 48.8 0 OAO UCO 201 A 1 HETATM 31 C CAM UCO . . . B 2 12.736 -1.901 -6.676 1 50.56 0 CAM UCO 201 A 1 HETATM 32 C CAN UCO . . . B 2 11.925 -2.475 -5.635 1 51.32 0 CAN UCO 201 A 1 HETATM 33 C CAP UCO . . . B 2 10.863 -1.769 -5.038 1 49.19 0 CAP UCO 201 A 1 HETATM 34 C CAT UCO . . . B 2 12.087 -3.82 -5.276 1 52.78 0 CAT UCO 201 A 1 HETATM 35 C CAS UCO . . . B 2 11.238 -4.405 -4.332 1 53.41 0 CAS UCO 201 A 1 HETATM 36 C CAR UCO . . . B 2 10.21 -3.696 -3.727 1 51.17 0 CAR UCO 201 A 1 HETATM 37 C CAQ UCO . . . B 2 10.012 -2.352 -4.084 1 50.6 0 CAQ UCO 201 A 1 HETATM 38 O OAU UCO . . . B 2 9 -1.588 -3.539 1 48.91 0 OAU UCO 201 A 1 HETATM 39 C CAV UCO . . . B 2 8.037 -2.144 -2.616 1 50.77 0 CAV UCO 201 A 1 HETATM 40 C CAW UCO . . . B 2 8.685 -2.506 -1.274 1 56.82 0 CAW UCO 201 A 1 HETATM 41 O OAY UCO . . . B 2 9.816 -1.993 -0.986 1 55 0 OAY UCO 201 A 1 HETATM 42 O OAX UCO . . . B 2 8.018 -3.319 -0.582 1 57.81 0 OAX UCO 201 A 1 HETATM 43 C CAL UCO . . . B 2 14.291 -1.941 -6.483 1 50.73 0 CAL UCO 201 A 1 HETATM 44 C CAK UCO . . . B 2 14.732 -0.989 -5.363 1 52.05 0 CAK UCO 201 A 1 HETATM 45 C CAD UCO . . . B 2 14.507 0.309 -5.868 1 51.98 0 CAD UCO 201 A 1 HETATM 46 C CAC UCO . . . B 2 15.398 0.819 -6.811 1 53.04 0 CAC UCO 201 A 1 HETATM 47 C CAE UCO . . . B 2 13.373 1.068 -5.48 1 47.89 0 CAE UCO 201 A 1 HETATM 48 C CAF UCO . . . B 2 13.179 2.324 -6.047 1 48.58 0 CAF UCO 201 A 1 HETATM 49 C CAA UCO . . . B 2 14.095 2.814 -7.006 1 50.08 0 CAA UCO 201 A 1 HETATM 50 O OAG UCO . . . B 2 14.056 4.015 -7.617 1 48.63 0 OAG UCO 201 A 1 HETATM 51 C CAH UCO . . . B 2 13.054 4.94 -7.2 1 48.84 0 CAH UCO 201 A 1 HETATM 52 C CAB UCO . . . B 2 15.184 2.059 -7.399 1 51.61 0 CAB UCO 201 A 1 HETATM 53 O OAI UCO . . . B 2 15.999 2.639 -8.329 1 54.45 0 OAI UCO 201 A 1 HETATM 54 C CAJ UCO . . . B 2 16.855 1.738 -9.027 1 55.75 0 CAJ UCO 201 A 1 HETATM 55 H HB6 UCO . . . B 2 10.756 -9.413 -4.303 1 53.9 0 HB6 UCO 201 A 1 HETATM 56 H HB7 UCO . . . B 2 11.123 -9.59 -6.027 1 51.9 0 HB7 UCO 201 A 1 HETATM 57 H HBZ UCO . . . B 2 10.292 -8.123 -5.427 1 50.21 0 HBZ UCO 201 A 1 HETATM 58 H HBR UCO . . . B 2 11.287 -7.852 -7.401 1 52.55 0 HBR UCO 201 A 1 HETATM 59 H HCC UCO . . . B 2 14.928 -6.773 -2.715 1 65.09 0 HCC UCO 201 A 1 HETATM 60 H HCA UCO . . . B 2 13.969 -8.19 -3.173 1 64.09 0 HCA UCO 201 A 1 HETATM 61 H HCB UCO . . . B 2 13.373 -6.54 -3.513 1 61.02 0 HCB UCO 201 A 1 HETATM 62 H HCD UCO . . . B 2 17.499 -4.548 -7.254 1 51.78 0 HCD UCO 201 A 1 HETATM 63 H HCE UCO . . . B 2 15.854 -4.24 -7.82 1 48.04 0 HCE UCO 201 A 1 HETATM 64 H HCF UCO . . . B 2 16.843 -5.532 -8.575 1 49.6 0 HCF UCO 201 A 1 HETATM 65 H HBV UCO . . . B 2 14.682 -5.765 -8.985 1 54.93 0 HBV UCO 201 A 1 HETATM 66 H HBJ UCO . . . B 2 11.294 -7.139 -9.504 1 55.37 0 HBJ UCO 201 A 1 HETATM 67 H HBN UCO . . . B 2 15.435 -9.688 -11.394 1 68.78 0 HBN UCO 201 A 1 HETATM 68 H HBM UCO . . . B 2 14.503 -8.587 -9.313 1 67.04 0 HBM UCO 201 A 1 HETATM 69 H HB5 UCO . . . B 2 10.356 -4.523 -7.442 1 44.3 0 HB5 UCO 201 A 1 HETATM 70 H HBF UCO . . . B 2 10.282 -6.094 -8.233 1 44.56 0 HBF UCO 201 A 1 HETATM 71 H HB4 UCO . . . B 2 8.593 -5.162 -9.767 1 39.07 0 HB4 UCO 201 A 1 HETATM 72 H HBE UCO . . . B 2 8.1 -5.052 -8.086 1 40.36 0 HBE UCO 201 A 1 HETATM 73 H HB3 UCO . . . B 2 7.652 -3.135 -9.229 1 38.31 0 HB3 UCO 201 A 1 HETATM 74 H HBD UCO . . . B 2 8.98 -2.787 -8.16 1 40.15 0 HBD UCO 201 A 1 HETATM 75 H HB2 UCO . . . B 2 9.302 -3.401 -10.986 1 39.82 0 HB2 UCO 201 A 1 HETATM 76 H HB1 UCO . . . B 2 9.355 -1.834 -10.235 1 39.82 0 HB1 UCO 201 A 1 HETATM 77 H HA UCO . . . B 2 11.444 -2.917 -10.722 1 43.25 0 HA UCO 201 A 1 HETATM 78 H HAR UCO . . . B 2 12.422 -0.875 -6.831 1 49.26 0 HAR UCO 201 A 1 HETATM 79 H HAS UCO . . . B 2 10.694 -0.742 -5.332 1 48.8 0 HAS UCO 201 A 1 HETATM 80 H HAV UCO . . . B 2 12.88 -4.411 -5.733 1 53.32 0 HAV UCO 201 A 1 HETATM 81 H HAU UCO . . . B 2 11.403 -5.441 -4.042 1 54.45 0 HAU UCO 201 A 1 HETATM 82 H HAT UCO . . . B 2 9.595 -4.197 -2.985 1 52.78 0 HAT UCO 201 A 1 HETATM 83 H HAW UCO . . . B 2 7.579 -3.033 -3.039 1 50.44 0 HAW UCO 201 A 1 HETATM 84 H HAX UCO . . . B 2 7.259 -1.404 -2.437 1 50.69 0 HAX UCO 201 A 1 HETATM 85 H HAP UCO . . . B 2 14.82 -1.553 -7.294 1 50.64 0 HAP UCO 201 A 1 HETATM 86 H HAQ UCO . . . B 2 14.653 -2.84 -6.103 1 52.41 0 HAQ UCO 201 A 1 HETATM 87 H HAN UCO . . . B 2 15.755 -1.077 -5.18 1 54.52 0 HAN UCO 201 A 1 HETATM 88 H HAO UCO . . . B 2 14.139 -0.997 -4.51 1 52.92 0 HAO UCO 201 A 1 HETATM 89 H HAC UCO . . . B 2 16.237 0.198 -7.121 1 53.79 0 HAC UCO 201 A 1 HETATM 90 H HAE UCO . . . B 2 12.679 0.678 -4.74 1 49.13 0 HAE UCO 201 A 1 HETATM 91 H HAF UCO . . . B 2 12.33 2.913 -5.73 1 48.01 0 HAF UCO 201 A 1 HETATM 92 H HAJ UCO . . . B 2 12.928 5.692 -7.981 1 47.91 0 HAJ UCO 201 A 1 HETATM 93 H HAH UCO . . . B 2 13.381 5.433 -6.285 1 50.52 0 HAH UCO 201 A 1 HETATM 94 H HAI UCO . . . B 2 12.107 4.453 -7.035 1 47.26 0 HAI UCO 201 A 1 HETATM 95 H HAK UCO . . . B 2 17.287 2.257 -9.885 1 55.59 0 HAK UCO 201 A 1 HETATM 96 H HAL UCO . . . B 2 16.285 0.881 -9.384 1 53.96 0 HAL UCO 201 A 1 HETATM 97 H HAM UCO . . . B 2 17.663 1.406 -8.371 1 57.72 0 HAM UCO 201 A 1 # _model_server_stats.io_time_ms 102 _model_server_stats.parse_time_ms 25 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 300 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 97 #