data_8CCV # _model_server_result.job_id -U6prNjluRyJuXghlgQKEw _model_server_result.datetime_utc '2024-11-06 16:28:29' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8ccv # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":302}' # _entry.id 8CCV # _exptl.entry_id 8CCV _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 123.109 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'NICOTINIC ACID' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8CCV _cell.length_a 56.862 _cell.length_b 56.862 _cell.length_c 263.866 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8CCV _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 F N N # _chem_comp.formula 'C6 H5 N O2' _chem_comp.formula_weight 123.109 _chem_comp.id NIO _chem_comp.mon_nstd_flag . _chem_comp.name 'NICOTINIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N C1 NIO doub 291 n y N C5 NIO sing 292 n y C1 C2 NIO sing 293 n y C1 H1 NIO sing 294 n n C2 C3 NIO doub 295 n y C2 C6 NIO sing 296 n n C3 C4 NIO sing 297 n y C3 H3 NIO sing 298 n n C4 C5 NIO doub 299 n y C4 H4 NIO sing 300 n n C5 H5 NIO sing 301 n n C6 O1 NIO doub 302 n n C6 O2 NIO sing 303 n n O2 HO2 NIO sing 304 n n # _atom_sites.entry_id 8CCV _atom_sites.fract_transf_matrix[1][1] 0.017586 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017586 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00379 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 FMN A 1 301 1 FMN FMN . D 3 NIO A 1 302 3 NIO NIO . E 2 FMN B 1 301 2 FMN FMN . F 3 NIO B 1 302 4 NIO NIO . G 4 HOH A 1 401 6 HOH HOH . G 4 HOH A 2 402 206 HOH HOH . G 4 HOH A 3 403 51 HOH HOH . G 4 HOH A 4 404 82 HOH HOH . G 4 HOH A 5 405 43 HOH HOH . G 4 HOH A 6 406 16 HOH HOH . G 4 HOH A 7 407 62 HOH HOH . G 4 HOH A 8 408 2 HOH HOH . G 4 HOH A 9 409 195 HOH HOH . G 4 HOH A 10 410 2 HOH HOH . G 4 HOH A 11 411 10 HOH HOH . G 4 HOH A 12 412 185 HOH HOH . G 4 HOH A 13 413 39 HOH HOH . G 4 HOH A 14 414 10 HOH HOH . G 4 HOH A 15 415 41 HOH HOH . G 4 HOH A 16 416 170 HOH HOH . G 4 HOH A 17 417 202 HOH HOH . G 4 HOH A 18 418 9 HOH HOH . G 4 HOH A 19 419 159 HOH HOH . G 4 HOH A 20 420 171 HOH HOH . G 4 HOH A 21 421 27 HOH HOH . G 4 HOH A 22 422 144 HOH HOH . G 4 HOH A 23 423 61 HOH HOH . G 4 HOH A 24 424 169 HOH HOH . G 4 HOH A 25 425 1 HOH HOH . G 4 HOH A 26 426 12 HOH HOH . G 4 HOH A 27 427 146 HOH HOH . G 4 HOH A 28 428 205 HOH HOH . G 4 HOH A 29 429 193 HOH HOH . G 4 HOH A 30 430 96 HOH HOH . G 4 HOH A 31 431 224 HOH HOH . G 4 HOH A 32 432 209 HOH HOH . G 4 HOH A 33 433 30 HOH HOH . G 4 HOH A 34 434 217 HOH HOH . G 4 HOH A 35 435 6 HOH HOH . G 4 HOH A 36 436 46 HOH HOH . G 4 HOH A 37 437 31 HOH HOH . G 4 HOH A 38 438 28 HOH HOH . G 4 HOH A 39 439 9 HOH HOH . G 4 HOH A 40 440 213 HOH HOH . G 4 HOH A 41 441 20 HOH HOH . G 4 HOH A 42 442 4 HOH HOH . G 4 HOH A 43 443 243 HOH HOH . G 4 HOH A 44 444 17 HOH HOH . G 4 HOH A 45 445 111 HOH HOH . G 4 HOH A 46 446 20 HOH HOH . G 4 HOH A 47 447 30 HOH HOH . G 4 HOH A 48 448 17 HOH HOH . G 4 HOH A 49 449 211 HOH HOH . G 4 HOH A 50 450 158 HOH HOH . G 4 HOH A 51 451 15 HOH HOH . G 4 HOH A 52 452 179 HOH HOH . G 4 HOH A 53 453 49 HOH HOH . G 4 HOH A 54 454 56 HOH HOH . G 4 HOH A 55 455 178 HOH HOH . G 4 HOH A 56 456 97 HOH HOH . G 4 HOH A 57 457 194 HOH HOH . G 4 HOH A 58 458 8 HOH HOH . G 4 HOH A 59 459 24 HOH HOH . G 4 HOH A 60 460 221 HOH HOH . G 4 HOH A 61 461 175 HOH HOH . G 4 HOH A 62 462 160 HOH HOH . G 4 HOH A 63 463 23 HOH HOH . G 4 HOH A 64 464 100 HOH HOH . G 4 HOH A 65 465 264 HOH HOH . G 4 HOH A 66 466 75 HOH HOH . G 4 HOH A 67 467 13 HOH HOH . G 4 HOH A 68 468 66 HOH HOH . G 4 HOH A 69 469 225 HOH HOH . G 4 HOH A 70 470 72 HOH HOH . G 4 HOH A 71 471 89 HOH HOH . G 4 HOH A 72 472 80 HOH HOH . G 4 HOH A 73 473 216 HOH HOH . G 4 HOH A 74 474 162 HOH HOH . G 4 HOH A 75 475 121 HOH HOH . G 4 HOH A 76 476 36 HOH HOH . G 4 HOH A 77 477 11 HOH HOH . G 4 HOH A 78 478 25 HOH HOH . G 4 HOH A 79 479 40 HOH HOH . G 4 HOH A 80 480 183 HOH HOH . G 4 HOH A 81 481 289 HOH HOH . G 4 HOH A 82 482 57 HOH HOH . G 4 HOH A 83 483 157 HOH HOH . G 4 HOH A 84 484 139 HOH HOH . G 4 HOH A 85 485 238 HOH HOH . G 4 HOH A 86 486 208 HOH HOH . G 4 HOH A 87 487 247 HOH HOH . G 4 HOH A 88 488 293 HOH HOH . G 4 HOH A 89 489 244 HOH HOH . G 4 HOH A 90 490 155 HOH HOH . G 4 HOH A 91 491 37 HOH HOH . G 4 HOH A 92 492 77 HOH HOH . G 4 HOH A 93 493 291 HOH HOH . G 4 HOH A 94 494 53 HOH HOH . G 4 HOH A 95 495 42 HOH HOH . H 4 HOH B 1 401 148 HOH HOH . H 4 HOH B 2 402 234 HOH HOH . H 4 HOH B 3 403 203 HOH HOH . H 4 HOH B 4 404 51 HOH HOH . H 4 HOH B 5 405 22 HOH HOH . H 4 HOH B 6 406 85 HOH HOH . H 4 HOH B 7 407 35 HOH HOH . H 4 HOH B 8 408 165 HOH HOH . H 4 HOH B 9 409 28 HOH HOH . H 4 HOH B 10 410 33 HOH HOH . H 4 HOH B 11 411 32 HOH HOH . H 4 HOH B 12 412 112 HOH HOH . H 4 HOH B 13 413 69 HOH HOH . H 4 HOH B 14 414 108 HOH HOH . H 4 HOH B 15 415 7 HOH HOH . H 4 HOH B 16 416 22 HOH HOH . H 4 HOH B 17 417 266 HOH HOH . H 4 HOH B 18 418 142 HOH HOH . H 4 HOH B 19 419 5 HOH HOH . H 4 HOH B 20 420 174 HOH HOH . H 4 HOH B 21 421 27 HOH HOH . H 4 HOH B 22 422 52 HOH HOH . H 4 HOH B 23 423 18 HOH HOH . H 4 HOH B 24 424 36 HOH HOH . H 4 HOH B 25 425 223 HOH HOH . H 4 HOH B 26 426 201 HOH HOH . H 4 HOH B 27 427 11 HOH HOH . H 4 HOH B 28 428 230 HOH HOH . H 4 HOH B 29 429 32 HOH HOH . H 4 HOH B 30 430 71 HOH HOH . H 4 HOH B 31 431 173 HOH HOH . H 4 HOH B 32 432 180 HOH HOH . H 4 HOH B 33 433 8 HOH HOH . H 4 HOH B 34 434 3 HOH HOH . H 4 HOH B 35 435 35 HOH HOH . H 4 HOH B 36 436 192 HOH HOH . H 4 HOH B 37 437 19 HOH HOH . H 4 HOH B 38 438 60 HOH HOH . H 4 HOH B 39 439 14 HOH HOH . H 4 HOH B 40 440 93 HOH HOH . H 4 HOH B 41 441 172 HOH HOH . H 4 HOH B 42 442 83 HOH HOH . H 4 HOH B 43 443 116 HOH HOH . H 4 HOH B 44 444 16 HOH HOH . H 4 HOH B 45 445 54 HOH HOH . H 4 HOH B 46 446 166 HOH HOH . H 4 HOH B 47 447 109 HOH HOH . H 4 HOH B 48 448 181 HOH HOH . H 4 HOH B 49 449 44 HOH HOH . H 4 HOH B 50 450 21 HOH HOH . H 4 HOH B 51 451 38 HOH HOH . H 4 HOH B 52 452 187 HOH HOH . H 4 HOH B 53 453 26 HOH HOH . H 4 HOH B 54 454 29 HOH HOH . H 4 HOH B 55 455 250 HOH HOH . H 4 HOH B 56 456 23 HOH HOH . H 4 HOH B 57 457 90 HOH HOH . H 4 HOH B 58 458 52 HOH HOH . H 4 HOH B 59 459 56 HOH HOH . H 4 HOH B 60 460 18 HOH HOH . H 4 HOH B 61 461 196 HOH HOH . H 4 HOH B 62 462 13 HOH HOH . H 4 HOH B 63 463 34 HOH HOH . H 4 HOH B 64 464 45 HOH HOH . H 4 HOH B 65 465 86 HOH HOH . H 4 HOH B 66 466 5 HOH HOH . H 4 HOH B 67 467 25 HOH HOH . H 4 HOH B 68 468 39 HOH HOH . H 4 HOH B 69 469 49 HOH HOH . H 4 HOH B 70 470 154 HOH HOH . H 4 HOH B 71 471 134 HOH HOH . H 4 HOH B 72 472 70 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N NIO . . . F 3 8.025 -5.052 10.08 1 59.11 ? N NIO 302 B 1 HETATM 2 C C1 NIO . . . F 3 8.217 -5.863 11.14 1 64.72 ? C1 NIO 302 B 1 HETATM 3 C C2 NIO . . . F 3 9.477 -6.1 11.734 1 57.24 ? C2 NIO 302 B 1 HETATM 4 C C3 NIO . . . F 3 10.585 -5.475 11.152 1 56.34 ? C3 NIO 302 B 1 HETATM 5 C C4 NIO . . . F 3 10.415 -4.677 10.026 1 57.22 ? C4 NIO 302 B 1 HETATM 6 C C5 NIO . . . F 3 9.12 -4.477 9.534 1 53.07 ? C5 NIO 302 B 1 HETATM 7 C C6 NIO . . . F 3 9.641 -7.048 12.959 1 53.78 ? C6 NIO 302 B 1 HETATM 8 O O1 NIO . . . F 3 8.665 -7.783 13.298 1 47.42 ? O1 NIO 302 B 1 HETATM 9 O O2 NIO . . . F 3 10.761 -7.082 13.536 1 42.28 ? O2 NIO 302 B 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 39 _model_server_stats.query_time_ms 351 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 9 #