data_8CE9
#
_model_server_result.job_id            KomJ_CcDHu6m608gEOME2A 
_model_server_result.datetime_utc      '2024-11-26 06:49:00' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8ce9 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":202}' 
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_entry.id    8CE9 
#
_exptl.entry_id    8CE9 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    20 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          132.961 
_cell.angle_gamma         90 
_cell.entry_id            8CE9 
_cell.length_a            128.495 
_cell.length_b            51.494 
_cell.length_c            90.172 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8CE9 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,E,F,G,H,I,J,K,L,M,N,BA 1 1 
B,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,CA 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 D N N 
? 3 E N N 
? 3 F N N 
? 3 G N N 
? 3 H N N 
? 3 J N N 
? 3 K N N 
? 3 L N N 
? 3 M N N 
? 3 N N N 
? 3 O N N 
? 3 Q N N 
? 3 R N N 
? 3 U N N 
? 3 V N N 
? 3 W N N 
? 3 X N N 
? 3 Y N N 
? 3 Z N N 
? 3 AA N N 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 70 n n 
C1 C2 EDO sing 71 n n 
C1 H11 EDO sing 72 n n 
C1 H12 EDO sing 73 n n 
O1 HO1 EDO sing 74 n n 
C2 O2 EDO sing 75 n n 
C2 H21 EDO sing 76 n n 
C2 H22 EDO sing 77 n n 
O2 HO2 EDO sing 78 n n 
#
_atom_sites.entry_id                     8CE9 
_atom_sites.fract_transf_matrix[1][1]    0.007782 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.007247 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.01942 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.015154 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 SO4 B 1 201 202 SO4 SO4 . 
D 3 EDO B 1 202 204 EDO EDO . 
E 3 EDO B 1 203 206 EDO EDO . 
F 3 EDO B 1 204 208 EDO EDO . 
G 3 EDO B 1 205 210 EDO EDO . 
H 3 EDO B 1 206 211 EDO EDO . 
I 2 SO4 B 1 207 212 SO4 SO4 . 
J 3 EDO B 1 208 213 EDO EDO . 
K 3 EDO B 1 209 215 EDO EDO . 
L 3 EDO B 1 210 217 EDO EDO . 
M 3 EDO B 1 211 219 EDO EDO . 
N 3 EDO B 1 212 205 EDO EDO . 
O 3 EDO A 1 201 216 EDO EDO . 
P 2 SO4 A 1 202 202 SO4 SO4 . 
Q 3 EDO A 1 203 203 EDO EDO . 
R 3 EDO A 1 204 204 EDO EDO . 
S 2 SO4 A 1 205 207 SO4 SO4 . 
T 2 SO4 A 1 206 208 SO4 SO4 . 
U 3 EDO A 1 207 210 EDO EDO . 
V 3 EDO A 1 208 211 EDO EDO . 
W 3 EDO A 1 209 213 EDO EDO . 
X 3 EDO A 1 210 215 EDO EDO . 
Y 3 EDO A 1 211 217 EDO EDO . 
Z 3 EDO A 1 212 218 EDO EDO . 
AA 3 EDO A 1 213 219 EDO EDO . 
BA 4 HOH B 1 301 59 HOH HOH . 
BA 4 HOH B 2 302 23 HOH HOH . 
BA 4 HOH B 3 303 64 HOH HOH . 
BA 4 HOH B 4 304 82 HOH HOH . 
BA 4 HOH B 5 305 2 HOH HOH . 
BA 4 HOH B 6 306 58 HOH HOH . 
BA 4 HOH B 7 307 38 HOH HOH . 
BA 4 HOH B 8 308 17 HOH HOH . 
BA 4 HOH B 9 309 84 HOH HOH . 
BA 4 HOH B 10 310 19 HOH HOH . 
BA 4 HOH B 11 311 13 HOH HOH . 
BA 4 HOH B 12 312 47 HOH HOH . 
BA 4 HOH B 13 313 20 HOH HOH . 
BA 4 HOH B 14 314 25 HOH HOH . 
BA 4 HOH B 15 315 12 HOH HOH . 
BA 4 HOH B 16 316 34 HOH HOH . 
BA 4 HOH B 17 317 43 HOH HOH . 
BA 4 HOH B 18 318 6 HOH HOH . 
BA 4 HOH B 19 319 61 HOH HOH . 
BA 4 HOH B 20 320 48 HOH HOH . 
BA 4 HOH B 21 321 39 HOH HOH . 
BA 4 HOH B 22 322 31 HOH HOH . 
BA 4 HOH B 23 323 79 HOH HOH . 
BA 4 HOH B 24 324 87 HOH HOH . 
BA 4 HOH B 25 325 11 HOH HOH . 
BA 4 HOH B 26 326 21 HOH HOH . 
BA 4 HOH B 27 327 90 HOH HOH . 
BA 4 HOH B 28 328 24 HOH HOH . 
BA 4 HOH B 29 329 10 HOH HOH . 
BA 4 HOH B 30 330 36 HOH HOH . 
BA 4 HOH B 31 331 18 HOH HOH . 
BA 4 HOH B 32 332 14 HOH HOH . 
BA 4 HOH B 33 333 60 HOH HOH . 
BA 4 HOH B 34 334 9 HOH HOH . 
BA 4 HOH B 35 335 22 HOH HOH . 
BA 4 HOH B 36 336 71 HOH HOH . 
BA 4 HOH B 37 337 83 HOH HOH . 
BA 4 HOH B 38 338 77 HOH HOH . 
BA 4 HOH B 39 339 3 HOH HOH . 
BA 4 HOH B 40 340 65 HOH HOH . 
BA 4 HOH B 41 341 88 HOH HOH . 
CA 4 HOH A 1 301 52 HOH HOH . 
CA 4 HOH A 2 302 89 HOH HOH . 
CA 4 HOH A 3 303 63 HOH HOH . 
CA 4 HOH A 4 304 68 HOH HOH . 
CA 4 HOH A 5 305 66 HOH HOH . 
CA 4 HOH A 6 306 7 HOH HOH . 
CA 4 HOH A 7 307 32 HOH HOH . 
CA 4 HOH A 8 308 8 HOH HOH . 
CA 4 HOH A 9 309 30 HOH HOH . 
CA 4 HOH A 10 310 5 HOH HOH . 
CA 4 HOH A 11 311 45 HOH HOH . 
CA 4 HOH A 12 312 40 HOH HOH . 
CA 4 HOH A 13 313 41 HOH HOH . 
CA 4 HOH A 14 314 76 HOH HOH . 
CA 4 HOH A 15 315 42 HOH HOH . 
CA 4 HOH A 16 316 54 HOH HOH . 
CA 4 HOH A 17 317 33 HOH HOH . 
CA 4 HOH A 18 318 67 HOH HOH . 
CA 4 HOH A 19 319 50 HOH HOH . 
CA 4 HOH A 20 320 35 HOH HOH . 
CA 4 HOH A 21 321 27 HOH HOH . 
CA 4 HOH A 22 322 53 HOH HOH . 
CA 4 HOH A 23 323 75 HOH HOH . 
CA 4 HOH A 24 324 46 HOH HOH . 
CA 4 HOH A 25 325 85 HOH HOH . 
CA 4 HOH A 26 326 44 HOH HOH . 
CA 4 HOH A 27 327 28 HOH HOH . 
CA 4 HOH A 28 328 37 HOH HOH . 
CA 4 HOH A 29 329 15 HOH HOH . 
CA 4 HOH A 30 330 62 HOH HOH . 
CA 4 HOH A 31 331 55 HOH HOH . 
CA 4 HOH A 32 332 1 HOH HOH . 
CA 4 HOH A 33 333 49 HOH HOH . 
CA 4 HOH A 34 334 56 HOH HOH . 
CA 4 HOH A 35 335 74 HOH HOH . 
CA 4 HOH A 36 336 4 HOH HOH . 
CA 4 HOH A 37 337 78 HOH HOH . 
CA 4 HOH A 38 338 72 HOH HOH . 
CA 4 HOH A 39 339 29 HOH HOH . 
CA 4 HOH A 40 340 70 HOH HOH . 
CA 4 HOH A 41 341 73 HOH HOH . 
CA 4 HOH A 42 342 80 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . D 3 -18.256 25.477 14.228 1 53.54 0 C1 EDO 202 B 1 
HETATM 2 O O1 EDO . . . D 3 -18.444 24.25 14.893 1 57.03 0 O1 EDO 202 B 1 
HETATM 3 C C2 EDO . . . D 3 -18.745 26.559 15.077 1 52.43 0 C2 EDO 202 B 1 
HETATM 4 O O2 EDO . . . D 3 -18.066 26.588 16.304 1 51.14 0 O2 EDO 202 B 1 
HETATM 5 H H11 EDO . . . D 3 -18.748 25.474 13.381 1 54.06 0 H11 EDO 202 B 1 
HETATM 6 H H12 EDO . . . D 3 -17.304 25.61 14.041 1 54.02 0 H12 EDO 202 B 1 
HETATM 7 H HO1 EDO . . . D 3 -18.117 23.631 14.4 0 57.18 0 HO1 EDO 202 B 1 
HETATM 8 H H21 EDO . . . D 3 -19.703 26.433 15.239 1 52.38 0 H21 EDO 202 B 1 
HETATM 9 H H22 EDO . . . D 3 -18.621 27.414 14.615 1 52.36 0 H22 EDO 202 B 1 
HETATM 10 H HO2 EDO . . . D 3 -17.634 25.865 16.408 1 51.55 0 HO2 EDO 202 B 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    46 
_model_server_stats.query_time_ms           274 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           10 
#