data_8CF3
#
_model_server_result.job_id            -noCzQSJ4jgc-UzYhMVgqQ 
_model_server_result.datetime_utc      '2024-12-21 17:04:29' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8cf3 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":601}' 
#
_entry.id    8CF3 
#
_exptl.entry_id    8CF3 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              485.601 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'Cefepime (open)' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          103.657 
_cell.angle_gamma         90 
_cell.entry_id            8CF3 
_cell.length_a            46.819 
_cell.length_b            109.47 
_cell.length_c            50.297 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8CF3 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A OG SER 57 C SER 389 1_555 C C15 UJ9 . C UJ9 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
covale ? covale2 B OG SER 57 E SER 389 1_555 D C15 UJ9 . E UJ9 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? 
#
_chem_comp.formula           'C19 H29 N6 O5 S2 1' 
_chem_comp.formula_weight    485.601 
_chem_comp.id                UJ9 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'Cefepime (open)' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     '(2R,5S)-2-[(1R)-1-[[(2Z)-2-(2-azanyl-1,3-thiazol-4-yl)-2-methoxyimino-ethanoyl]amino]-2-oxidanyl-ethyl]-5-[(1-methylpyrrolidin-1-ium-1-yl)methyl]-5,6-dihydro-2H-1,3-thiazine-4-carboxylic acid;Cefepimum (reacted)' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N04 C12 UJ9 sing 345 n n 
C09 O03 UJ9 sing 346 n n 
C12 N06 UJ9 doub 347 n y 
C12 S02 UJ9 sing 348 n y 
N06 C10 UJ9 sing 349 n y 
N03 O03 UJ9 sing 350 n n 
N03 C08 UJ9 doub 351 z n 
C10 C08 UJ9 sing 352 n n 
C10 C14 UJ9 doub 353 n y 
C08 C07 UJ9 sing 354 n n 
S02 C14 UJ9 sing 355 n y 
C22 C23 UJ9 sing 356 n n 
C22 N05 UJ9 sing 357 n n 
C23 C24 UJ9 sing 358 n n 
C02 N05 UJ9 sing 359 n n 
C02 C04 UJ9 sing 360 n n 
C07 O02 UJ9 doub 361 n n 
C07 N02 UJ9 sing 362 n n 
C03 C04 UJ9 sing 363 n n 
C03 S01 UJ9 sing 364 n n 
C24 C25 UJ9 sing 365 n n 
N05 C25 UJ9 sing 366 n n 
N05 C06 UJ9 sing 367 n n 
C04 C05 UJ9 sing 368 n n 
N02 C5 UJ9 sing 369 n n 
S01 C01 UJ9 sing 370 n n 
C05 C11 UJ9 sing 371 n n 
C05 N01 UJ9 doub 372 n n 
O05 C11 UJ9 doub 373 n n 
C5 C01 UJ9 sing 374 n n 
C5 C15 UJ9 sing 375 n n 
C01 N01 UJ9 sing 376 n n 
O1 C15 UJ9 sing 377 n n 
C11 O04 UJ9 sing 378 n n 
C5 H1 UJ9 sing 379 n n 
C15 H2 UJ9 sing 380 n n 
C15 H3 UJ9 sing 381 n n 
C01 H4 UJ9 sing 382 n n 
O1 H5 UJ9 sing 383 n n 
C02 H6 UJ9 sing 384 n n 
C02 H7 UJ9 sing 385 n n 
N02 H8 UJ9 sing 386 n n 
C03 H9 UJ9 sing 387 n n 
C03 H10 UJ9 sing 388 n n 
C04 H11 UJ9 sing 389 n n 
N04 H12 UJ9 sing 390 n n 
N04 H13 UJ9 sing 391 n n 
O04 H14 UJ9 sing 392 n n 
C06 H15 UJ9 sing 393 n n 
C06 H16 UJ9 sing 394 n n 
C06 H17 UJ9 sing 395 n n 
C09 H18 UJ9 sing 396 n n 
C09 H19 UJ9 sing 397 n n 
C09 H20 UJ9 sing 398 n n 
C14 H21 UJ9 sing 399 n n 
C22 H22 UJ9 sing 400 n n 
C22 H23 UJ9 sing 401 n n 
C23 H24 UJ9 sing 402 n n 
C23 H25 UJ9 sing 403 n n 
C24 H26 UJ9 sing 404 n n 
C24 H27 UJ9 sing 405 n n 
C25 H28 UJ9 sing 406 n n 
C25 H29 UJ9 sing 407 n n 
#
_atom_sites.entry_id                     8CF3 
_atom_sites.fract_transf_matrix[1][1]    0.021359 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.00519 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009135 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.02046 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 UJ9 C 1 601 389 UJ9 CCC . 
D 2 UJ9 E 1 601 389 UJ9 CCC . 
E 3 HOH C 1 701 2 HOH HOH . 
E 3 HOH C 2 702 27 HOH HOH . 
E 3 HOH C 3 703 4 HOH HOH . 
E 3 HOH C 4 704 35 HOH HOH . 
E 3 HOH C 5 705 20 HOH HOH . 
E 3 HOH C 6 706 70 HOH HOH . 
E 3 HOH C 7 707 8 HOH HOH . 
E 3 HOH C 8 708 30 HOH HOH . 
E 3 HOH C 9 709 12 HOH HOH . 
E 3 HOH C 10 710 13 HOH HOH . 
E 3 HOH C 11 711 11 HOH HOH . 
E 3 HOH C 12 712 40 HOH HOH . 
E 3 HOH C 13 713 55 HOH HOH . 
E 3 HOH C 14 714 42 HOH HOH . 
E 3 HOH C 15 715 51 HOH HOH . 
E 3 HOH C 16 716 10 HOH HOH . 
E 3 HOH C 17 717 69 HOH HOH . 
E 3 HOH C 18 718 17 HOH HOH . 
E 3 HOH C 19 719 57 HOH HOH . 
E 3 HOH C 20 720 38 HOH HOH . 
E 3 HOH C 21 721 37 HOH HOH . 
E 3 HOH C 22 722 31 HOH HOH . 
E 3 HOH C 23 723 39 HOH HOH . 
E 3 HOH C 24 724 58 HOH HOH . 
E 3 HOH C 25 725 26 HOH HOH . 
E 3 HOH C 26 726 44 HOH HOH . 
E 3 HOH C 27 727 46 HOH HOH . 
E 3 HOH C 28 728 61 HOH HOH . 
E 3 HOH C 29 729 29 HOH HOH . 
E 3 HOH C 30 730 68 HOH HOH . 
E 3 HOH C 31 731 52 HOH HOH . 
E 3 HOH C 32 732 60 HOH HOH . 
E 3 HOH C 33 733 59 HOH HOH . 
E 3 HOH C 34 734 43 HOH HOH . 
E 3 HOH C 35 735 47 HOH HOH . 
F 3 HOH E 1 701 6 HOH HOH . 
F 3 HOH E 2 702 67 HOH HOH . 
F 3 HOH E 3 703 18 HOH HOH . 
F 3 HOH E 4 704 23 HOH HOH . 
F 3 HOH E 5 705 21 HOH HOH . 
F 3 HOH E 6 706 62 HOH HOH . 
F 3 HOH E 7 707 28 HOH HOH . 
F 3 HOH E 8 708 66 HOH HOH . 
F 3 HOH E 9 709 1 HOH HOH . 
F 3 HOH E 10 710 14 HOH HOH . 
F 3 HOH E 11 711 36 HOH HOH . 
F 3 HOH E 12 712 22 HOH HOH . 
F 3 HOH E 13 713 53 HOH HOH . 
F 3 HOH E 14 714 65 HOH HOH . 
F 3 HOH E 15 715 56 HOH HOH . 
F 3 HOH E 16 716 45 HOH HOH . 
F 3 HOH E 17 717 41 HOH HOH . 
F 3 HOH E 18 718 49 HOH HOH . 
F 3 HOH E 19 719 25 HOH HOH . 
F 3 HOH E 20 720 63 HOH HOH . 
F 3 HOH E 21 721 64 HOH HOH . 
F 3 HOH E 22 722 5 HOH HOH . 
F 3 HOH E 23 723 54 HOH HOH . 
F 3 HOH E 24 724 50 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C5 UJ9 . . . D 2 42.174 -11.994 32.153 1 45.48 0 C5 UJ9 601 E 1 
HETATM 2 C C15 UJ9 . . . D 2 41.402 -13.07 31.423 1 43.32 0 C15 UJ9 601 E 1 
HETATM 3 C C01 UJ9 . . . D 2 42.273 -10.729 31.278 1 46.64 0 C01 UJ9 601 E 1 
HETATM 4 N N01 UJ9 . . . D 2 42.362 -11.066 29.869 1 47 0 N01 UJ9 601 E 1 
HETATM 5 O O1 UJ9 . . . D 2 42.27 -13.972 30.754 1 42.7 0 O1 UJ9 601 E 1 
HETATM 6 S S01 UJ9 . . . D 2 43.526 -9.59 31.903 1 49.02 0 S01 UJ9 601 E 1 
HETATM 7 C C02 UJ9 . . . D 2 45.71 -10.096 28.449 1 57.58 0 C02 UJ9 601 E 1 
HETATM 8 N N02 UJ9 . . . D 2 43.46 -12.551 32.613 1 45.14 0 N02 UJ9 601 E 1 
HETATM 9 O O02 UJ9 . . . D 2 43.213 -11.774 34.725 1 44.66 0 O02 UJ9 601 E 1 
HETATM 10 S S02 UJ9 . . . D 2 44.296 -15.939 36.806 1 43.22 0 S02 UJ9 601 E 1 
HETATM 11 C C03 UJ9 . . . D 2 44.917 -10.103 30.866 1 50.81 0 C03 UJ9 601 E 1 
HETATM 12 N N03 UJ9 . . . D 2 46.369 -12.765 33.87 1 46.4 0 N03 UJ9 601 E 1 
HETATM 13 O O03 UJ9 . . . D 2 46.399 -11.656 33.014 1 47.79 0 O03 UJ9 601 E 1 
HETATM 14 C C04 UJ9 . . . D 2 44.574 -10.294 29.426 1 52.23 0 C04 UJ9 601 E 1 
HETATM 15 N N04 UJ9 . . . D 2 46.875 -16.63 36.894 1 44.93 0 N04 UJ9 601 E 1 
HETATM 16 O O04 UJ9 . . . D 2 43.973 -12.219 27.147 1 46.77 0 O04 UJ9 601 E 1 
HETATM 17 C C05 UJ9 . . . D 2 43.417 -11.042 29.13 1 48.7 0 C05 UJ9 601 E 1 
HETATM 18 N N05 UJ9 . . . D 2 45.753 -8.917 27.449 1 64.29 1 N05 UJ9 601 E 1 
HETATM 19 O O05 UJ9 . . . D 2 42.103 -10.96 27.149 1 46.15 -1 O05 UJ9 601 E 1 
HETATM 20 C C06 UJ9 . . . D 2 44.396 -8.282 27.249 1 64.87 0 C06 UJ9 601 E 1 
HETATM 21 N N06 UJ9 . . . D 2 46.234 -14.871 35.502 1 44.34 0 N06 UJ9 601 E 1 
HETATM 22 C C07 UJ9 . . . D 2 43.861 -12.401 33.886 1 44.88 0 C07 UJ9 601 E 1 
HETATM 23 C C08 UJ9 . . . D 2 45.157 -13.064 34.22 1 45.01 0 C08 UJ9 601 E 1 
HETATM 24 C C09 UJ9 . . . D 2 47.683 -11.016 33.078 1 48.79 0 C09 UJ9 601 E 1 
HETATM 25 C C10 UJ9 . . . D 2 45.078 -14.195 35.15 1 44.22 0 C10 UJ9 601 E 1 
HETATM 26 C C11 UJ9 . . . D 2 43.124 -11.417 27.701 1 47.08 0 C11 UJ9 601 E 1 
HETATM 27 C C12 UJ9 . . . D 2 45.967 -15.811 36.359 1 44.03 0 C12 UJ9 601 E 1 
HETATM 28 C C14 UJ9 . . . D 2 43.952 -14.635 35.764 1 43.41 0 C14 UJ9 601 E 1 
HETATM 29 C C22 UJ9 . . . D 2 46.739 -7.834 27.834 1 67.19 0 C22 UJ9 601 E 1 
HETATM 30 C C23 UJ9 . . . D 2 47.157 -7.146 26.523 1 68.11 0 C23 UJ9 601 E 1 
HETATM 31 C C24 UJ9 . . . D 2 46.801 -8.132 25.397 1 67.33 0 C24 UJ9 601 E 1 
HETATM 32 C C25 UJ9 . . . D 2 46.221 -9.378 26.095 1 66.69 0 C25 UJ9 601 E 1 
#
_model_server_stats.io_time_ms              99 
_model_server_stats.parse_time_ms           28 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           288 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           32 
#