data_8CH8 # _model_server_result.job_id Cz0v0NgTkGjMLmb4xMm6Vw _model_server_result.datetime_utc '2024-10-10 11:20:15' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8ch8 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":501}' # _entry.id 8CH8 # _exptl.entry_id 8CH8 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 328.429 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '~{O}-(5,6,7,8-tetrahydronaphthalen-2-yl) ~{N}-(6-methoxypyridin-2-yl)-~{N}-methyl-carbamothioate' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8CH8 _cell.length_a 91.649 _cell.length_b 91.649 _cell.length_c 85.744 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8CH8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall 'P 4nw 2abw' _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C18 H20 N2 O2 S' _chem_comp.formula_weight 328.429 _chem_comp.id ULC _chem_comp.mon_nstd_flag . _chem_comp.name '~{O}-(5,6,7,8-tetrahydronaphthalen-2-yl) ~{N}-(6-methoxypyridin-2-yl)-~{N}-methyl-carbamothioate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C20 C21 ULC sing 358 n n C20 C19 ULC sing 359 n n C21 C16 ULC sing 360 n n C19 C18 ULC sing 361 n n C16 C15 ULC doub 362 n y C16 C17 ULC sing 363 n y C18 C17 ULC sing 364 n n C15 C14 ULC sing 365 n y C17 C22 ULC doub 366 n y C14 O13 ULC sing 367 n n C14 C23 ULC doub 368 n y C7 C8 ULC doub 369 n y C7 C6 ULC sing 370 n y C22 C23 ULC sing 371 n y C8 C3 ULC sing 372 n y O13 C11 ULC sing 373 n n C6 C5 ULC doub 374 n y C11 S12 ULC doub 375 n n C11 N2 ULC sing 376 n n C3 N2 ULC sing 377 n n C3 N4 ULC doub 378 n y N2 C1 ULC sing 379 n n C5 N4 ULC sing 380 n y C5 O9 ULC sing 381 n n C10 O9 ULC sing 382 n n C7 H1 ULC sing 383 n n C15 H2 ULC sing 384 n n C20 H3 ULC sing 385 n n C20 H4 ULC sing 386 n n C21 H5 ULC sing 387 n n C21 H6 ULC sing 388 n n C22 H7 ULC sing 389 n n C1 H8 ULC sing 390 n n C1 H9 ULC sing 391 n n C1 H10 ULC sing 392 n n C19 H11 ULC sing 393 n n C19 H12 ULC sing 394 n n C23 H13 ULC sing 395 n n C10 H14 ULC sing 396 n n C10 H15 ULC sing 397 n n C10 H16 ULC sing 398 n n C18 H17 ULC sing 399 n n C18 H18 ULC sing 400 n n C6 H19 ULC sing 401 n n C8 H20 ULC sing 402 n n # _atom_sites.entry_id 8CH8 _atom_sites.fract_transf_matrix[1][1] 0.010911 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010911 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011663 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ULC A 1 501 1 ULC LIR . C 3 HOH A 1 601 601 HOH HOH . C 3 HOH A 2 602 632 HOH HOH . C 3 HOH A 3 603 635 HOH HOH . C 3 HOH A 4 604 648 HOH HOH . C 3 HOH A 5 605 615 HOH HOH . C 3 HOH A 6 606 619 HOH HOH . C 3 HOH A 7 607 617 HOH HOH . C 3 HOH A 8 608 621 HOH HOH . C 3 HOH A 9 609 618 HOH HOH . C 3 HOH A 10 610 607 HOH HOH . C 3 HOH A 11 611 610 HOH HOH . C 3 HOH A 12 612 655 HOH HOH . C 3 HOH A 13 613 645 HOH HOH . C 3 HOH A 14 614 642 HOH HOH . C 3 HOH A 15 615 640 HOH HOH . C 3 HOH A 16 616 613 HOH HOH . C 3 HOH A 17 617 691 HOH HOH . C 3 HOH A 18 618 656 HOH HOH . C 3 HOH A 19 619 665 HOH HOH . C 3 HOH A 20 620 623 HOH HOH . C 3 HOH A 21 621 624 HOH HOH . C 3 HOH A 22 622 676 HOH HOH . C 3 HOH A 23 623 662 HOH HOH . C 3 HOH A 24 624 688 HOH HOH . C 3 HOH A 25 625 668 HOH HOH . C 3 HOH A 26 626 682 HOH HOH . C 3 HOH A 27 627 625 HOH HOH . C 3 HOH A 28 628 633 HOH HOH . C 3 HOH A 29 629 680 HOH HOH . C 3 HOH A 30 630 660 HOH HOH . C 3 HOH A 31 631 647 HOH HOH . C 3 HOH A 32 632 733 HOH HOH . C 3 HOH A 33 633 699 HOH HOH . C 3 HOH A 34 634 721 HOH HOH . C 3 HOH A 35 635 664 HOH HOH . C 3 HOH A 36 636 708 HOH HOH . C 3 HOH A 37 637 641 HOH HOH . C 3 HOH A 38 638 734 HOH HOH . C 3 HOH A 39 639 747 HOH HOH . C 3 HOH A 40 640 646 HOH HOH . C 3 HOH A 41 641 694 HOH HOH . C 3 HOH A 42 642 716 HOH HOH . C 3 HOH A 43 643 677 HOH HOH . C 3 HOH A 44 644 644 HOH HOH . C 3 HOH A 45 645 713 HOH HOH . C 3 HOH A 46 646 703 HOH HOH . C 3 HOH A 47 647 732 HOH HOH . C 3 HOH A 48 648 692 HOH HOH . C 3 HOH A 49 649 695 HOH HOH . C 3 HOH A 50 650 696 HOH HOH . C 3 HOH A 51 651 722 HOH HOH . C 3 HOH A 52 652 735 HOH HOH . C 3 HOH A 53 653 658 HOH HOH . C 3 HOH A 54 654 738 HOH HOH . C 3 HOH A 55 655 746 HOH HOH . C 3 HOH A 56 656 710 HOH HOH . C 3 HOH A 57 657 754 HOH HOH . C 3 HOH A 58 658 778 HOH HOH . C 3 HOH A 59 659 748 HOH HOH . C 3 HOH A 60 660 764 HOH HOH . C 3 HOH A 61 661 769 HOH HOH . C 3 HOH A 62 662 759 HOH HOH . C 3 HOH A 63 663 768 HOH HOH . C 3 HOH A 64 664 709 HOH HOH . C 3 HOH A 65 665 776 HOH HOH . C 3 HOH A 66 666 726 HOH HOH . C 3 HOH A 67 667 779 HOH HOH . C 3 HOH A 68 668 791 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C7 ULC . . . B 2 8.82 -11.198 -2.143 1 85.09 ? C7 ULC 501 A 1 HETATM 2 C C15 ULC . . . B 2 8.634 -16.852 -3.516 1 80.87 ? C15 ULC 501 A 1 HETATM 3 C C17 ULC . . . B 2 9.761 -18.971 -3.273 1 66.78 ? C17 ULC 501 A 1 HETATM 4 C C20 ULC . . . B 2 9.45 -19.597 -6.08 1 59.13 ? C20 ULC 501 A 1 HETATM 5 C C21 ULC . . . B 2 8.827 -18.316 -5.543 1 69.01 ? C21 ULC 501 A 1 HETATM 6 C C22 ULC . . . B 2 9.978 -18.67 -1.931 1 79.42 ? C22 ULC 501 A 1 HETATM 7 C C1 ULC . . . B 2 6.161 -13.725 0.561 1 79.46 ? C1 ULC 501 A 1 HETATM 8 C C3 ULC . . . B 2 8.098 -12.946 -0.702 1 99.49 ? C3 ULC 501 A 1 HETATM 9 O O9 ULC . . . B 2 10.735 -11.277 0.89 1 106.09 ? O9 ULC 501 A 1 HETATM 10 C C11 ULC . . . B 2 7.398 -15.245 -0.807 1 99.59 ? C11 ULC 501 A 1 HETATM 11 C C14 ULC . . . B 2 8.863 -16.571 -2.178 1 83.85 ? C14 ULC 501 A 1 HETATM 12 C C16 ULC . . . B 2 9.077 -18.048 -4.079 1 71.96 ? C16 ULC 501 A 1 HETATM 13 C C19 ULC . . . B 2 10.676 -20.032 -5.305 1 65.89 ? C19 ULC 501 A 1 HETATM 14 C C23 ULC . . . B 2 9.535 -17.481 -1.382 1 85.68 ? C23 ULC 501 A 1 HETATM 15 C C10 ULC . . . B 2 11.561 -10.147 0.625 1 96.72 ? C10 ULC 501 A 1 HETATM 16 C C18 ULC . . . B 2 10.3 -20.248 -3.863 1 59.74 ? C18 ULC 501 A 1 HETATM 17 C C5 ULC . . . B 2 9.831 -11.618 -0.044 1 119.74 ? C5 ULC 501 A 1 HETATM 18 C C6 ULC . . . B 2 9.78 -10.86 -1.209 1 101.5 ? C6 ULC 501 A 1 HETATM 19 C C8 ULC . . . B 2 7.954 -12.257 -1.904 1 86.83 ? C8 ULC 501 A 1 HETATM 20 N N2 ULC . . . B 2 7.257 -13.999 -0.361 1 99.01 ? N2 ULC 501 A 1 HETATM 21 N N4 ULC . . . B 2 9.018 -12.633 0.209 1 110.47 ? N4 ULC 501 A 1 HETATM 22 O O13 ULC . . . B 2 8.472 -15.326 -1.649 1 109.77 ? O13 ULC 501 A 1 HETATM 23 S S12 ULC . . . B 2 6.436 -16.532 -0.435 1 89.13 ? S12 ULC 501 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 278 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 23 #