data_8CHO # _model_server_result.job_id B83h7G_XscWY1gxX6Md6QA _model_server_result.datetime_utc '2025-02-18 11:18:19' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8cho # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 8CHO # _exptl.entry_id 8CHO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 324.367 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'O-ACETALDEHYDYL-HEXAETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 8CHO _cell.length_a 61.68 _cell.length_b 61.68 _cell.length_c 143.6 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8CHO _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 65 2 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 9_765 -x+2,-x+y+1,-z+1/3 -0.5 -0.866025 0 -0.866025 0.5 0 0 0 -1 92.52 53.416447 47.866667 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C14 H28 O8' _chem_comp.formula_weight 324.367 _chem_comp.id P4C _chem_comp.mon_nstd_flag . _chem_comp.name 'O-ACETALDEHYDYL-HEXAETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'POLYETHYLENE 400' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C2 P4C sing 224 n n O1 HO1 P4C sing 225 n n C2 C3 P4C sing 226 n n C2 H21A P4C sing 227 n n C2 H22 P4C sing 228 n n C3 O4 P4C sing 229 n n C3 H31 P4C sing 230 n n C3 H32 P4C sing 231 n n O4 C5 P4C sing 232 n n C5 C6 P4C sing 233 n n C5 H51 P4C sing 234 n n C5 H52 P4C sing 235 n n C6 O7 P4C sing 236 n n C6 H61 P4C sing 237 n n C6 H62 P4C sing 238 n n O7 C8 P4C sing 239 n n C8 C9 P4C sing 240 n n C8 H81 P4C sing 241 n n C8 H82 P4C sing 242 n n C9 O10 P4C sing 243 n n C9 H91 P4C sing 244 n n C9 H92 P4C sing 245 n n O10 C11 P4C sing 246 n n C11 C12 P4C sing 247 n n C11 H111 P4C sing 248 n n C11 H112 P4C sing 249 n n C12 O13 P4C sing 250 n n C12 H121 P4C sing 251 n n C12 H122 P4C sing 252 n n O13 C14 P4C sing 253 n n C14 C15 P4C sing 254 n n C14 H141 P4C sing 255 n n C14 H142 P4C sing 256 n n C15 O16 P4C sing 257 n n C15 H151 P4C sing 258 n n C15 H152 P4C sing 259 n n O16 C17 P4C sing 260 n n C17 C18 P4C sing 261 n n C17 H171 P4C sing 262 n n C17 H172 P4C sing 263 n n C18 O19 P4C sing 264 n n C18 H181 P4C sing 265 n n C18 H182 P4C sing 266 n n O19 C20 P4C sing 267 n n C20 C21 P4C sing 268 n n C20 H201 P4C sing 269 n n C20 H202 P4C sing 270 n n C21 O22 P4C doub 271 n n C21 H21 P4C sing 272 n n # _atom_sites.entry_id 8CHO _atom_sites.fract_transf_matrix[1][1] 0.016213 _atom_sites.fract_transf_matrix[1][2] 0.00936 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018721 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006964 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 P4C A 1 301 301 P4C P4C . C 3 HOH A 1 201 201 HOH HOH . C 3 HOH A 2 202 202 HOH HOH . C 3 HOH A 3 203 203 HOH HOH . C 3 HOH A 4 204 204 HOH HOH . C 3 HOH A 5 205 205 HOH HOH . C 3 HOH A 6 206 206 HOH HOH . C 3 HOH A 7 207 207 HOH HOH . C 3 HOH A 8 208 208 HOH HOH . C 3 HOH A 9 209 209 HOH HOH . C 3 HOH A 10 210 210 HOH HOH . C 3 HOH A 11 211 211 HOH HOH . C 3 HOH A 12 212 212 HOH HOH . C 3 HOH A 13 213 213 HOH HOH . C 3 HOH A 14 214 214 HOH HOH . C 3 HOH A 15 215 215 HOH HOH . C 3 HOH A 16 216 216 HOH HOH . C 3 HOH A 17 217 217 HOH HOH . C 3 HOH A 18 218 218 HOH HOH . C 3 HOH A 19 219 219 HOH HOH . C 3 HOH A 20 220 220 HOH HOH . C 3 HOH A 21 221 221 HOH HOH . C 3 HOH A 22 222 222 HOH HOH . C 3 HOH A 23 223 223 HOH HOH . C 3 HOH A 24 224 224 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 P4C . . . B 2 16.338 77.208 9.051 1 56.03 ? O1 P4C 301 A 1 HETATM 2 C C2 P4C . . . B 2 15.975 77.372 7.68 1 54.08 ? C2 P4C 301 A 1 HETATM 3 C C3 P4C . . . B 2 16.779 77.393 6.48 1 53.01 ? C3 P4C 301 A 1 HETATM 4 O O4 P4C . . . B 2 16.144 78.161 5.282 1 49.92 ? O4 P4C 301 A 1 HETATM 5 C C5 P4C . . . B 2 15.907 77.34 4.133 1 50.14 ? C5 P4C 301 A 1 HETATM 6 C C6 P4C . . . B 2 15.101 78.117 3.259 1 48.45 ? C6 P4C 301 A 1 HETATM 7 O O7 P4C . . . B 2 15.463 78.086 1.775 1 50.51 ? O7 P4C 301 A 1 HETATM 8 C C8 P4C . . . B 2 15.435 76.759 1.234 1 51.19 ? C8 P4C 301 A 1 HETATM 9 C C9 P4C . . . B 2 15.582 76.803 -0.223 1 53.41 ? C9 P4C 301 A 1 HETATM 10 O O10 P4C . . . B 2 14.461 76.008 -1.048 1 52.04 ? O10 P4C 301 A 1 HETATM 11 C C11 P4C . . . B 2 13.262 76.733 -1.382 1 51.34 ? C11 P4C 301 A 1 HETATM 12 C C12 P4C . . . B 2 12.363 75.879 -2.111 1 51.23 ? C12 P4C 301 A 1 HETATM 13 O O13 P4C . . . B 2 11.189 75.232 -1.301 1 53.96 ? O13 P4C 301 A 1 HETATM 14 C C14 P4C . . . B 2 9.865 75.454 -1.82 1 52.11 ? C14 P4C 301 A 1 HETATM 15 C C15 P4C . . . B 2 9.066 76.089 -0.828 1 52.24 ? C15 P4C 301 A 1 HETATM 16 O O16 P4C . . . B 2 9.835 76.321 0.505 1 58.54 ? O16 P4C 301 A 1 HETATM 17 C C17 P4C . . . B 2 10.371 77.636 0.685 1 57.09 ? C17 P4C 301 A 1 HETATM 18 C C18 P4C . . . B 2 9.738 78.241 1.816 1 60.95 ? C18 P4C 301 A 1 HETATM 19 O O19 P4C . . . B 2 8.163 78.172 1.743 1 61.98 ? O19 P4C 301 A 1 HETATM 20 C C20 P4C . . . B 2 7.536 77.265 2.7 1 62.91 ? C20 P4C 301 A 1 HETATM 21 C C21 P4C . . . B 2 7.42 77.745 4.083 1 62.99 ? C21 P4C 301 A 1 HETATM 22 O O22 P4C . . . B 2 6.702 77.535 4.576 1 61.1 ? O22 P4C 301 A 1 # _model_server_stats.io_time_ms 63 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 323 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 22 #