data_8CJ0 # _model_server_result.job_id RxZx9aZbV-1IIjMpK_WVcQ _model_server_result.datetime_utc '2024-11-06 16:28:16' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8cj0 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":601}' # _entry.id 8CJ0 # _exptl.entry_id 8CJ0 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 456.344 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FLAVIN MONONUCLEOTIDE' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8CJ0 _cell.length_a 57.31 _cell.length_b 57.31 _cell.length_c 265.67 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8CJ0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 F N N # _chem_comp.formula 'C17 H21 N4 O9 P' _chem_comp.formula_weight 456.344 _chem_comp.id FMN _chem_comp.mon_nstd_flag . _chem_comp.name 'FLAVIN MONONUCLEOTIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'RIBOFLAVIN MONOPHOSPHATE' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 FMN sing 92 n n N1 C10 FMN doub 93 n n C2 O2 FMN doub 94 n n C2 N3 FMN sing 95 n n N3 C4 FMN sing 96 n n N3 HN3 FMN sing 97 n n C4 O4 FMN doub 98 n n C4 C4A FMN sing 99 n n C4A N5 FMN doub 100 n n C4A C10 FMN sing 101 n n N5 C5A FMN sing 102 n n C5A C6 FMN doub 103 n y C5A C9A FMN sing 104 n y C6 C7 FMN sing 105 n y C6 H6 FMN sing 106 n n C7 C7M FMN sing 107 n n C7 C8 FMN doub 108 n y C7M HM71 FMN sing 109 n n C7M HM72 FMN sing 110 n n C7M HM73 FMN sing 111 n n C8 C8M FMN sing 112 n n C8 C9 FMN sing 113 n y C8M HM81 FMN sing 114 n n C8M HM82 FMN sing 115 n n C8M HM83 FMN sing 116 n n C9 C9A FMN doub 117 n y C9 H9 FMN sing 118 n n C9A N10 FMN sing 119 n n N10 C10 FMN sing 120 n n N10 C1' FMN sing 121 n n C1' C2' FMN sing 122 n n C1' "H1'1" FMN sing 123 n n C1' "H1'2" FMN sing 124 n n C2' O2' FMN sing 125 n n C2' C3' FMN sing 126 n n C2' H2' FMN sing 127 n n O2' HO2' FMN sing 128 n n C3' O3' FMN sing 129 n n C3' C4' FMN sing 130 n n C3' H3' FMN sing 131 n n O3' HO3' FMN sing 132 n n C4' O4' FMN sing 133 n n C4' C5' FMN sing 134 n n C4' H4' FMN sing 135 n n O4' HO4' FMN sing 136 n n C5' O5' FMN sing 137 n n C5' "H5'1" FMN sing 138 n n C5' "H5'2" FMN sing 139 n n O5' P FMN sing 140 n n P O1P FMN doub 141 n n P O2P FMN sing 142 n n P O3P FMN sing 143 n n O2P HOP2 FMN sing 144 n n O3P HOP3 FMN sing 145 n n # _atom_sites.entry_id 8CJ0 _atom_sites.fract_transf_matrix[1][1] 0.017449 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017449 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003764 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 FMN A 1 601 601 FMN FMN . D 3 NIO A 1 602 1 NIO NIO . E 4 EDO A 1 603 1 EDO EDO . F 2 FMN B 1 301 603 FMN FMN . G 3 NIO B 1 302 1 NIO NIO . H 5 HOH A 1 701 73 HOH HOH . H 5 HOH A 2 702 75 HOH HOH . H 5 HOH A 3 703 120 HOH HOH . H 5 HOH A 4 704 102 HOH HOH . H 5 HOH A 5 705 131 HOH HOH . H 5 HOH A 6 706 27 HOH HOH . H 5 HOH A 7 707 55 HOH HOH . H 5 HOH A 8 708 77 HOH HOH . H 5 HOH A 9 709 84 HOH HOH . H 5 HOH A 10 710 171 HOH HOH . H 5 HOH A 11 711 2 HOH HOH . H 5 HOH A 12 712 70 HOH HOH . H 5 HOH A 13 713 145 HOH HOH . H 5 HOH A 14 714 28 HOH HOH . H 5 HOH A 15 715 91 HOH HOH . H 5 HOH A 16 716 16 HOH HOH . H 5 HOH A 17 717 24 HOH HOH . H 5 HOH A 18 718 86 HOH HOH . H 5 HOH A 19 719 143 HOH HOH . H 5 HOH A 20 720 138 HOH HOH . H 5 HOH A 21 721 40 HOH HOH . H 5 HOH A 22 722 48 HOH HOH . H 5 HOH A 23 723 10 HOH HOH . H 5 HOH A 24 724 66 HOH HOH . H 5 HOH A 25 725 95 HOH HOH . H 5 HOH A 26 726 49 HOH HOH . H 5 HOH A 27 727 71 HOH HOH . H 5 HOH A 28 728 18 HOH HOH . H 5 HOH A 29 729 104 HOH HOH . H 5 HOH A 30 730 124 HOH HOH . H 5 HOH A 31 731 74 HOH HOH . H 5 HOH A 32 732 1 HOH HOH . H 5 HOH A 33 733 78 HOH HOH . H 5 HOH A 34 734 29 HOH HOH . H 5 HOH A 35 735 58 HOH HOH . H 5 HOH A 36 736 165 HOH HOH . H 5 HOH A 37 737 122 HOH HOH . H 5 HOH A 38 738 92 HOH HOH . H 5 HOH A 39 739 11 HOH HOH . H 5 HOH A 40 740 14 HOH HOH . H 5 HOH A 41 741 119 HOH HOH . H 5 HOH A 42 742 87 HOH HOH . H 5 HOH A 43 743 83 HOH HOH . H 5 HOH A 44 744 33 HOH HOH . H 5 HOH A 45 745 93 HOH HOH . H 5 HOH A 46 746 116 HOH HOH . H 5 HOH A 47 747 8 HOH HOH . H 5 HOH A 48 748 15 HOH HOH . H 5 HOH A 49 749 23 HOH HOH . H 5 HOH A 50 750 113 HOH HOH . H 5 HOH A 51 751 81 HOH HOH . H 5 HOH A 52 752 115 HOH HOH . H 5 HOH A 53 753 50 HOH HOH . H 5 HOH A 54 754 128 HOH HOH . H 5 HOH A 55 755 37 HOH HOH . H 5 HOH A 56 756 53 HOH HOH . H 5 HOH A 57 757 17 HOH HOH . H 5 HOH A 58 758 12 HOH HOH . H 5 HOH A 59 759 147 HOH HOH . H 5 HOH A 60 760 62 HOH HOH . H 5 HOH A 61 761 129 HOH HOH . H 5 HOH A 62 762 3 HOH HOH . H 5 HOH A 63 763 142 HOH HOH . H 5 HOH A 64 764 177 HOH HOH . H 5 HOH A 65 765 144 HOH HOH . H 5 HOH A 66 766 169 HOH HOH . H 5 HOH A 67 767 188 HOH HOH . H 5 HOH A 68 768 68 HOH HOH . H 5 HOH A 69 769 64 HOH HOH . H 5 HOH A 70 770 150 HOH HOH . H 5 HOH A 71 771 175 HOH HOH . H 5 HOH A 72 772 158 HOH HOH . H 5 HOH A 73 773 162 HOH HOH . H 5 HOH A 74 774 137 HOH HOH . H 5 HOH A 75 775 173 HOH HOH . H 5 HOH A 76 776 164 HOH HOH . H 5 HOH A 77 777 161 HOH HOH . H 5 HOH A 78 778 156 HOH HOH . H 5 HOH A 79 779 159 HOH HOH . H 5 HOH A 80 780 187 HOH HOH . I 5 HOH B 1 401 118 HOH HOH . I 5 HOH B 2 402 38 HOH HOH . I 5 HOH B 3 403 88 HOH HOH . I 5 HOH B 4 404 114 HOH HOH . I 5 HOH B 5 405 43 HOH HOH . I 5 HOH B 6 406 85 HOH HOH . I 5 HOH B 7 407 107 HOH HOH . I 5 HOH B 8 408 13 HOH HOH . I 5 HOH B 9 409 34 HOH HOH . I 5 HOH B 10 410 101 HOH HOH . I 5 HOH B 11 411 21 HOH HOH . I 5 HOH B 12 412 98 HOH HOH . I 5 HOH B 13 413 9 HOH HOH . I 5 HOH B 14 414 26 HOH HOH . I 5 HOH B 15 415 76 HOH HOH . I 5 HOH B 16 416 67 HOH HOH . I 5 HOH B 17 417 39 HOH HOH . I 5 HOH B 18 418 94 HOH HOH . I 5 HOH B 19 419 32 HOH HOH . I 5 HOH B 20 420 56 HOH HOH . I 5 HOH B 21 421 25 HOH HOH . I 5 HOH B 22 422 65 HOH HOH . I 5 HOH B 23 423 44 HOH HOH . I 5 HOH B 24 424 36 HOH HOH . I 5 HOH B 25 425 57 HOH HOH . I 5 HOH B 26 426 41 HOH HOH . I 5 HOH B 27 427 117 HOH HOH . I 5 HOH B 28 428 7 HOH HOH . I 5 HOH B 29 429 47 HOH HOH . I 5 HOH B 30 430 153 HOH HOH . I 5 HOH B 31 431 112 HOH HOH . I 5 HOH B 32 432 5 HOH HOH . I 5 HOH B 33 433 31 HOH HOH . I 5 HOH B 34 434 90 HOH HOH . I 5 HOH B 35 435 99 HOH HOH . I 5 HOH B 36 436 45 HOH HOH . I 5 HOH B 37 437 146 HOH HOH . I 5 HOH B 38 438 30 HOH HOH . I 5 HOH B 39 439 149 HOH HOH . I 5 HOH B 40 440 22 HOH HOH . I 5 HOH B 41 441 35 HOH HOH . I 5 HOH B 42 442 125 HOH HOH . I 5 HOH B 43 443 135 HOH HOH . I 5 HOH B 44 444 60 HOH HOH . I 5 HOH B 45 445 141 HOH HOH . I 5 HOH B 46 446 20 HOH HOH . I 5 HOH B 47 447 152 HOH HOH . I 5 HOH B 48 448 123 HOH HOH . I 5 HOH B 49 449 42 HOH HOH . I 5 HOH B 50 450 51 HOH HOH . I 5 HOH B 51 451 59 HOH HOH . I 5 HOH B 52 452 126 HOH HOH . I 5 HOH B 53 453 46 HOH HOH . I 5 HOH B 54 454 133 HOH HOH . I 5 HOH B 55 455 168 HOH HOH . I 5 HOH B 56 456 100 HOH HOH . I 5 HOH B 57 457 111 HOH HOH . I 5 HOH B 58 458 157 HOH HOH . I 5 HOH B 59 459 52 HOH HOH . I 5 HOH B 60 460 19 HOH HOH . I 5 HOH B 61 461 181 HOH HOH . I 5 HOH B 62 462 160 HOH HOH . I 5 HOH B 63 463 89 HOH HOH . I 5 HOH B 64 464 140 HOH HOH . I 5 HOH B 65 465 97 HOH HOH . I 5 HOH B 66 466 109 HOH HOH . I 5 HOH B 67 467 154 HOH HOH . I 5 HOH B 68 468 105 HOH HOH . I 5 HOH B 69 469 82 HOH HOH . I 5 HOH B 70 470 106 HOH HOH . I 5 HOH B 71 471 190 HOH HOH . I 5 HOH B 72 472 155 HOH HOH . I 5 HOH B 73 473 170 HOH HOH . I 5 HOH B 74 474 186 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 FMN . . . C 2 8.763 -4.868 16.107 1 21.17 ? N1 FMN 601 A 1 HETATM 2 C C2 FMN . . . C 2 7.533 -4.747 15.59 1 27.65 ? C2 FMN 601 A 1 HETATM 3 O O2 FMN . . . C 2 6.574 -5.377 16.07 1 29.16 ? O2 FMN 601 A 1 HETATM 4 N N3 FMN . . . C 2 7.291 -3.935 14.525 1 24.1 ? N3 FMN 601 A 1 HETATM 5 C C4 FMN . . . C 2 8.27 -3.182 13.926 1 23.87 ? C4 FMN 601 A 1 HETATM 6 O O4 FMN . . . C 2 7.978 -2.503 12.954 1 23.54 ? O4 FMN 601 A 1 HETATM 7 C C4A FMN . . . C 2 9.591 -3.296 14.43 1 20.08 ? C4A FMN 601 A 1 HETATM 8 N N5 FMN . . . C 2 10.601 -2.652 13.837 1 18.55 ? N5 FMN 601 A 1 HETATM 9 C C5A FMN . . . C 2 11.826 -2.728 14.459 1 16.01 ? C5A FMN 601 A 1 HETATM 10 C C6 FMN . . . C 2 12.891 -1.938 13.973 1 19.91 ? C6 FMN 601 A 1 HETATM 11 C C7 FMN . . . C 2 14.09 -1.861 14.633 1 18.09 ? C7 FMN 601 A 1 HETATM 12 C C7M FMN . . . C 2 15.184 -0.947 14.138 1 19.7 ? C7M FMN 601 A 1 HETATM 13 C C8 FMN . . . C 2 14.315 -2.706 15.762 1 18.4 ? C8 FMN 601 A 1 HETATM 14 C C8M FMN . . . C 2 15.645 -2.704 16.468 1 18.49 ? C8M FMN 601 A 1 HETATM 15 C C9 FMN . . . C 2 13.332 -3.575 16.166 1 17.29 ? C9 FMN 601 A 1 HETATM 16 C C9A FMN . . . C 2 12.059 -3.555 15.576 1 17.94 ? C9A FMN 601 A 1 HETATM 17 N N10 FMN . . . C 2 11.017 -4.345 16.048 1 17.29 ? N10 FMN 601 A 1 HETATM 18 C C10 FMN . . . C 2 9.747 -4.217 15.532 1 17.42 ? C10 FMN 601 A 1 HETATM 19 C C1' FMN . . . C 2 11.249 -5.22 17.202 1 14.71 ? C1' FMN 601 A 1 HETATM 20 C C2' FMN . . . C 2 12.126 -6.432 16.841 1 16.77 ? C2' FMN 601 A 1 HETATM 21 O O2' FMN . . . C 2 11.398 -7.53 16.207 1 16.99 ? O2' FMN 601 A 1 HETATM 22 C C3' FMN . . . C 2 12.695 -6.884 18.186 1 19.83 ? C3' FMN 601 A 1 HETATM 23 O O3' FMN . . . C 2 13.684 -5.982 18.646 1 15.74 ? O3' FMN 601 A 1 HETATM 24 C C4' FMN . . . C 2 13.197 -8.322 18.368 1 23.49 ? C4' FMN 601 A 1 HETATM 25 O O4' FMN . . . C 2 12.732 -9.3 17.468 1 18.44 ? O4' FMN 601 A 1 HETATM 26 C C5' FMN . . . C 2 12.533 -8.916 19.575 1 54.65 ? C5' FMN 601 A 1 HETATM 27 O O5' FMN . . . C 2 13.547 -8.807 20.501 1 18.31 ? O5' FMN 601 A 1 HETATM 28 P P FMN . . . C 2 13.369 -7.867 21.736 1 17.79 ? P FMN 601 A 1 HETATM 29 O O1P FMN . . . C 2 12.116 -8.28 22.482 1 16.25 ? O1P FMN 601 A 1 HETATM 30 O O2P FMN . . . C 2 13.372 -6.424 21.274 1 16.72 ? O2P FMN 601 A 1 HETATM 31 O O3P FMN . . . C 2 14.636 -8.184 22.516 1 16.45 ? O3P FMN 601 A 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 33 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 284 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 31 #