data_8CL6 # _model_server_result.job_id skcz6YuH7Qc3dlePlM8U5w _model_server_result.datetime_utc '2024-11-05 10:40:15' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8cl6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":206}' # _entry.id 8CL6 # _exptl.entry_id 8CL6 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 238.278 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PENTAETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8CL6 _cell.length_a 77.9 _cell.length_b 77.9 _cell.length_c 37.69 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8CL6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 G N N ? 4 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 6 A CYS 6 1_555 A SG CYS 127 A CYS 127 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.015 ? disulf ? disulf2 A SG CYS 30 A CYS 30 1_555 A SG CYS 115 A CYS 115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.009 ? disulf ? disulf3 A SG CYS 64 A CYS 64 1_555 A SG CYS 80 A CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf4 A SG CYS 76 A CYS 76 1_555 A SG CYS 94 A CYS 94 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2 ? metalc ? metalc1 A O GLY 49 A GLY 49 1_555 F NA NA . A NA 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.839 ? metalc ? metalc2 A OG1 THR 51 A THR 51 1_555 F NA NA . A NA 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.636 ? metalc ? metalc3 A O TYR 53 A TYR 53 1_555 E NA NA . A NA 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.85 ? metalc ? metalc4 A OD2 ASP 66 A ASP 66 1_555 F NA NA . A NA 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.717 ? metalc ? metalc5 A OG1 THR 69 A THR 69 1_555 F NA NA . A NA 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.032 ? metalc ? metalc6 A OG SER 91 A SER 91 1_555 E NA NA . A NA 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.924 ? # _chem_comp.formula 'C10 H22 O6' _chem_comp.formula_weight 238.278 _chem_comp.id 1PE _chem_comp.mon_nstd_flag . _chem_comp.name 'PENTAETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms PEG400 # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag OH2 C12 1PE sing 1 n n OH2 HO2 1PE sing 2 n n C12 C22 1PE sing 3 n n C12 H121 1PE sing 4 n n C12 H122 1PE sing 5 n n C22 OH3 1PE sing 6 n n C22 H221 1PE sing 7 n n C22 H222 1PE sing 8 n n OH3 C23 1PE sing 9 n n C13 C23 1PE sing 10 n n C13 OH4 1PE sing 11 n n C13 H131 1PE sing 12 n n C13 H132 1PE sing 13 n n C23 H231 1PE sing 14 n n C23 H232 1PE sing 15 n n OH4 C24 1PE sing 16 n n C14 C24 1PE sing 17 n n C14 OH5 1PE sing 18 n n C14 H141 1PE sing 19 n n C14 H142 1PE sing 20 n n C24 H241 1PE sing 21 n n C24 H242 1PE sing 22 n n OH5 C25 1PE sing 23 n n C15 C25 1PE sing 24 n n C15 OH6 1PE sing 25 n n C15 H151 1PE sing 26 n n C15 H152 1PE sing 27 n n C25 H251 1PE sing 28 n n C25 H252 1PE sing 29 n n OH6 C26 1PE sing 30 n n C16 C26 1PE sing 31 n n C16 OH7 1PE sing 32 n n C16 H161 1PE sing 33 n n C16 H162 1PE sing 34 n n C26 H261 1PE sing 35 n n C26 H262 1PE sing 36 n n OH7 HO7 1PE sing 37 n n # _atom_sites.entry_id 8CL6 _atom_sites.fract_transf_matrix[1][1] 0.012837 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012837 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.026532 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CL A 1 201 1137 CL CL . C 2 CL A 1 202 1138 CL CL . D 2 CL A 1 203 1139 CL CL . E 3 NA A 1 204 1145 NA NA . F 3 NA A 1 205 1146 NA NA . G 4 1PE A 1 206 1147 1PE 1PE . H 4 1PE A 1 207 1148 1PE 1PE . I 5 EDO A 1 208 1149 EDO EDO . J 6 HOH A 1 301 74 HOH HOH . J 6 HOH A 2 302 98 HOH HOH . J 6 HOH A 3 303 124 HOH HOH . J 6 HOH A 4 304 112 HOH HOH . J 6 HOH A 5 305 131 HOH HOH . J 6 HOH A 6 306 61 HOH HOH . J 6 HOH A 7 307 52 HOH HOH . J 6 HOH A 8 308 19 HOH HOH . J 6 HOH A 9 309 106 HOH HOH . J 6 HOH A 10 310 27 HOH HOH . J 6 HOH A 11 311 111 HOH HOH . J 6 HOH A 12 312 17 HOH HOH . J 6 HOH A 13 313 1 HOH HOH . J 6 HOH A 14 314 15 HOH HOH . J 6 HOH A 15 315 86 HOH HOH . J 6 HOH A 16 316 109 HOH HOH . J 6 HOH A 17 317 90 HOH HOH . J 6 HOH A 18 318 66 HOH HOH . J 6 HOH A 19 319 129 HOH HOH . J 6 HOH A 20 320 35 HOH HOH . J 6 HOH A 21 321 3 HOH HOH . J 6 HOH A 22 322 50 HOH HOH . J 6 HOH A 23 323 40 HOH HOH . J 6 HOH A 24 324 4 HOH HOH . J 6 HOH A 25 325 59 HOH HOH . J 6 HOH A 26 326 81 HOH HOH . J 6 HOH A 27 327 43 HOH HOH . J 6 HOH A 28 328 28 HOH HOH . J 6 HOH A 29 329 34 HOH HOH . J 6 HOH A 30 330 92 HOH HOH . J 6 HOH A 31 331 114 HOH HOH . J 6 HOH A 32 332 9 HOH HOH . J 6 HOH A 33 333 47 HOH HOH . J 6 HOH A 34 334 36 HOH HOH . J 6 HOH A 35 335 78 HOH HOH . J 6 HOH A 36 336 24 HOH HOH . J 6 HOH A 37 337 16 HOH HOH . J 6 HOH A 38 338 56 HOH HOH . J 6 HOH A 39 339 18 HOH HOH . J 6 HOH A 40 340 97 HOH HOH . J 6 HOH A 41 341 110 HOH HOH . J 6 HOH A 42 342 94 HOH HOH . J 6 HOH A 43 343 33 HOH HOH . J 6 HOH A 44 344 38 HOH HOH . J 6 HOH A 45 345 53 HOH HOH . J 6 HOH A 46 346 126 HOH HOH . J 6 HOH A 47 347 12 HOH HOH . J 6 HOH A 48 348 117 HOH HOH . J 6 HOH A 49 349 70 HOH HOH . J 6 HOH A 50 350 13 HOH HOH . J 6 HOH A 51 351 107 HOH HOH . J 6 HOH A 52 352 100 HOH HOH . J 6 HOH A 53 353 11 HOH HOH . J 6 HOH A 54 354 89 HOH HOH . J 6 HOH A 55 355 25 HOH HOH . J 6 HOH A 56 356 39 HOH HOH . J 6 HOH A 57 357 76 HOH HOH . J 6 HOH A 58 358 32 HOH HOH . J 6 HOH A 59 359 83 HOH HOH . J 6 HOH A 60 360 30 HOH HOH . J 6 HOH A 61 361 14 HOH HOH . J 6 HOH A 62 362 42 HOH HOH . J 6 HOH A 63 363 73 HOH HOH . J 6 HOH A 64 364 58 HOH HOH . J 6 HOH A 65 365 8 HOH HOH . J 6 HOH A 66 366 26 HOH HOH . J 6 HOH A 67 367 57 HOH HOH . J 6 HOH A 68 368 48 HOH HOH . J 6 HOH A 69 369 71 HOH HOH . J 6 HOH A 70 370 62 HOH HOH . J 6 HOH A 71 371 85 HOH HOH . J 6 HOH A 72 372 51 HOH HOH . J 6 HOH A 73 373 10 HOH HOH . J 6 HOH A 74 374 21 HOH HOH . J 6 HOH A 75 375 88 HOH HOH . J 6 HOH A 76 376 2 HOH HOH . J 6 HOH A 77 377 31 HOH HOH . J 6 HOH A 78 378 49 HOH HOH . J 6 HOH A 79 379 125 HOH HOH . J 6 HOH A 80 380 122 HOH HOH . J 6 HOH A 81 381 93 HOH HOH . J 6 HOH A 82 382 113 HOH HOH . J 6 HOH A 83 383 82 HOH HOH . J 6 HOH A 84 384 45 HOH HOH . J 6 HOH A 85 385 60 HOH HOH . J 6 HOH A 86 386 128 HOH HOH . J 6 HOH A 87 387 29 HOH HOH . J 6 HOH A 88 388 22 HOH HOH . J 6 HOH A 89 389 7 HOH HOH . J 6 HOH A 90 390 37 HOH HOH . J 6 HOH A 91 391 116 HOH HOH . J 6 HOH A 92 392 64 HOH HOH . J 6 HOH A 93 393 65 HOH HOH . J 6 HOH A 94 394 6 HOH HOH . J 6 HOH A 95 395 80 HOH HOH . J 6 HOH A 96 396 5 HOH HOH . J 6 HOH A 97 397 96 HOH HOH . J 6 HOH A 98 398 23 HOH HOH . J 6 HOH A 99 399 68 HOH HOH . J 6 HOH A 100 400 127 HOH HOH . J 6 HOH A 101 401 99 HOH HOH . J 6 HOH A 102 402 121 HOH HOH . J 6 HOH A 103 403 103 HOH HOH . J 6 HOH A 104 404 104 HOH HOH . J 6 HOH A 105 405 41 HOH HOH . J 6 HOH A 106 406 20 HOH HOH . J 6 HOH A 107 407 72 HOH HOH . J 6 HOH A 108 408 105 HOH HOH . J 6 HOH A 109 409 87 HOH HOH . J 6 HOH A 110 410 115 HOH HOH . J 6 HOH A 111 411 67 HOH HOH . J 6 HOH A 112 412 101 HOH HOH . J 6 HOH A 113 413 119 HOH HOH . J 6 HOH A 114 414 46 HOH HOH . J 6 HOH A 115 415 95 HOH HOH . J 6 HOH A 116 416 108 HOH HOH . J 6 HOH A 117 417 63 HOH HOH . J 6 HOH A 118 418 130 HOH HOH . J 6 HOH A 119 419 55 HOH HOH . J 6 HOH A 120 420 75 HOH HOH . J 6 HOH A 121 421 84 HOH HOH . J 6 HOH A 122 422 102 HOH HOH . J 6 HOH A 123 423 123 HOH HOH . J 6 HOH A 124 424 44 HOH HOH . J 6 HOH A 125 425 91 HOH HOH . J 6 HOH A 126 426 77 HOH HOH . J 6 HOH A 127 427 120 HOH HOH . J 6 HOH A 128 428 69 HOH HOH . J 6 HOH A 129 429 118 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O OH2 1PE . . . G 4 -0.269 24.162 34.668 1 58.23 ? OH2 1PE 206 A 1 HETATM 2 C C12 1PE . . . G 4 0.834 23.263 34.662 1 57.72 ? C12 1PE 206 A 1 HETATM 3 C C22 1PE . . . G 4 1.576 23.309 33.358 1 57.19 ? C22 1PE 206 A 1 HETATM 4 O OH3 1PE . . . G 4 2.041 24.627 33.145 1 56.79 ? OH3 1PE 206 A 1 HETATM 5 C C13 1PE . . . G 4 3.558 26.125 32.148 1 56.9 ? C13 1PE 206 A 1 HETATM 6 C C23 1PE . . . G 4 2.998 24.742 32.101 1 56.68 ? C23 1PE 206 A 1 HETATM 7 O OH4 1PE . . . G 4 4.311 26.404 30.98 1 57.47 ? OH4 1PE 206 A 1 HETATM 8 C C24 1PE . . . G 4 3.791 27.498 30.229 1 57.68 ? C24 1PE 206 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 330 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 8 #