data_8CL7 # _model_server_result.job_id gZEWuxqosWC1cIoInrj0XQ _model_server_result.datetime_utc '2024-11-13 04:38:56' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8cl7 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"V","auth_seq_id":321}' # _entry.id 8CL7 # _exptl.entry_id 8CL7 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 282.547 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description EICOSANE _entity.pdbx_number_of_molecules 22 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8CL7 _cell.length_a 41.46 _cell.length_b 84.89 _cell.length_c 234.95 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8CL7 _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N ? 3 F N N ? 3 G N N ? 3 H N N ? 3 I N N ? 3 J N N ? 3 K N N ? 3 L N N ? 3 M N N ? 3 N N N ? 3 O N N ? 3 P N N ? 3 Q N N ? 3 R N N ? 3 S N N ? 3 T N N ? 3 U N N ? 3 V N N ? 3 W N N ? 3 X N N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id NZ _struct_conn.ptnr1_label_comp_id LYS _struct_conn.ptnr1_label_seq_id 248 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id LYS _struct_conn.ptnr1_auth_seq_id 255 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id C15 _struct_conn.ptnr2_label_comp_id RET _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id RET _struct_conn.ptnr2_auth_seq_id 301 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.354 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C20 H42' _chem_comp.formula_weight 282.547 _chem_comp.id LFA _chem_comp.mon_nstd_flag . _chem_comp.name EICOSANE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'LIPID FRAGMENT' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 LFA sing 181 n n C1 H11 LFA sing 182 n n C1 H12 LFA sing 183 n n C1 H13 LFA sing 184 n n C2 C3 LFA sing 185 n n C2 H21 LFA sing 186 n n C2 H22 LFA sing 187 n n C3 C4 LFA sing 188 n n C3 H31 LFA sing 189 n n C3 H32 LFA sing 190 n n C4 C5 LFA sing 191 n n C4 H41 LFA sing 192 n n C4 H42 LFA sing 193 n n C5 C6 LFA sing 194 n n C5 H51 LFA sing 195 n n C5 H52 LFA sing 196 n n C6 C7 LFA sing 197 n n C6 H61 LFA sing 198 n n C6 H62 LFA sing 199 n n C7 C8 LFA sing 200 n n C7 H71 LFA sing 201 n n C7 H72 LFA sing 202 n n C8 C9 LFA sing 203 n n C8 H81 LFA sing 204 n n C8 H82 LFA sing 205 n n C9 C10 LFA sing 206 n n C9 H91 LFA sing 207 n n C9 H92 LFA sing 208 n n C10 C11 LFA sing 209 n n C10 H101 LFA sing 210 n n C10 H102 LFA sing 211 n n C11 C12 LFA sing 212 n n C11 H111 LFA sing 213 n n C11 H112 LFA sing 214 n n C12 C13 LFA sing 215 n n C12 H121 LFA sing 216 n n C12 H122 LFA sing 217 n n C13 C14 LFA sing 218 n n C13 H131 LFA sing 219 n n C13 H132 LFA sing 220 n n C14 C15 LFA sing 221 n n C14 H141 LFA sing 222 n n C14 H142 LFA sing 223 n n C15 C16 LFA sing 224 n n C15 H151 LFA sing 225 n n C15 H152 LFA sing 226 n n C16 C17 LFA sing 227 n n C16 H161 LFA sing 228 n n C16 H162 LFA sing 229 n n C17 C18 LFA sing 230 n n C17 H171 LFA sing 231 n n C17 H172 LFA sing 232 n n C18 C19 LFA sing 233 n n C18 H181 LFA sing 234 n n C18 H182 LFA sing 235 n n C19 C20 LFA sing 236 n n C19 H191 LFA sing 237 n n C19 H192 LFA sing 238 n n C20 H201 LFA sing 239 n n C20 H202 LFA sing 240 n n C20 H203 LFA sing 241 n n # _atom_sites.entry_id 8CL7 _atom_sites.fract_transf_matrix[1][1] 0.02412 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01178 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004256 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 RET A 1 301 301 RET RET . C 3 LFA A 1 302 302 LFA LFA . D 3 LFA A 1 303 303 LFA LFA . E 3 LFA A 1 304 304 LFA LFA . F 3 LFA A 1 305 305 LFA LFA . G 3 LFA A 1 306 307 LFA LFA . H 3 LFA A 1 307 308 LFA LFA . I 3 LFA A 1 308 310 LFA LFA . J 3 LFA A 1 309 311 LFA LFA . K 3 LFA A 1 310 312 LFA LFA . L 3 LFA A 1 311 313 LFA LFA . M 3 LFA A 1 312 314 LFA LFA . N 3 LFA A 1 313 315 LFA LFA . O 3 LFA A 1 314 317 LFA LFA . P 3 LFA A 1 315 318 LFA LFA . Q 3 LFA A 1 316 319 LFA LFA . R 3 LFA A 1 317 320 LFA LFA . S 3 LFA A 1 318 322 LFA LFA . T 3 LFA A 1 319 323 LFA LFA . U 3 LFA A 1 320 324 LFA LFA . V 3 LFA A 1 321 325 LFA LFA . W 3 LFA A 1 322 326 LFA LFA . X 3 LFA A 1 323 327 LFA LFA . Y 4 HOH A 1 401 19 HOH HOH . Y 4 HOH A 2 402 76 HOH HOH . Y 4 HOH A 3 403 58 HOH HOH . Y 4 HOH A 4 404 101 HOH HOH . Y 4 HOH A 5 405 57 HOH HOH . Y 4 HOH A 6 406 29 HOH HOH . Y 4 HOH A 7 407 80 HOH HOH . Y 4 HOH A 8 408 20 HOH HOH . Y 4 HOH A 9 409 45 HOH HOH . Y 4 HOH A 10 410 100 HOH HOH . Y 4 HOH A 11 411 2 HOH HOH . Y 4 HOH A 12 412 1 HOH HOH . Y 4 HOH A 13 413 110 HOH HOH . Y 4 HOH A 14 414 105 HOH HOH . Y 4 HOH A 15 415 35 HOH HOH . Y 4 HOH A 16 416 56 HOH HOH . Y 4 HOH A 17 417 7 HOH HOH . Y 4 HOH A 18 418 28 HOH HOH . Y 4 HOH A 19 419 4 HOH HOH . Y 4 HOH A 20 420 51 HOH HOH . Y 4 HOH A 21 421 8 HOH HOH . Y 4 HOH A 22 422 97 HOH HOH . Y 4 HOH A 23 423 9 HOH HOH . Y 4 HOH A 24 424 37 HOH HOH . Y 4 HOH A 25 425 3 HOH HOH . Y 4 HOH A 26 426 6 HOH HOH . Y 4 HOH A 27 427 60 HOH HOH . Y 4 HOH A 28 428 10 HOH HOH . Y 4 HOH A 29 429 39 HOH HOH . Y 4 HOH A 30 430 5 HOH HOH . Y 4 HOH A 31 431 82 HOH HOH . Y 4 HOH A 32 432 89 HOH HOH . Y 4 HOH A 33 433 108 HOH HOH . Y 4 HOH A 34 434 13 HOH HOH . Y 4 HOH A 35 435 31 HOH HOH . Y 4 HOH A 36 436 36 HOH HOH . Y 4 HOH A 37 437 73 HOH HOH . Y 4 HOH A 38 438 109 HOH HOH . Y 4 HOH A 39 439 44 HOH HOH . Y 4 HOH A 40 440 12 HOH HOH . Y 4 HOH A 41 441 98 HOH HOH . Y 4 HOH A 42 442 21 HOH HOH . Y 4 HOH A 43 443 42 HOH HOH . Y 4 HOH A 44 444 83 HOH HOH . Y 4 HOH A 45 445 14 HOH HOH . Y 4 HOH A 46 446 52 HOH HOH . Y 4 HOH A 47 447 49 HOH HOH . Y 4 HOH A 48 448 11 HOH HOH . Y 4 HOH A 49 449 27 HOH HOH . Y 4 HOH A 50 450 115 HOH HOH . Y 4 HOH A 51 451 24 HOH HOH . Y 4 HOH A 52 452 16 HOH HOH . Y 4 HOH A 53 453 118 HOH HOH . Y 4 HOH A 54 454 66 HOH HOH . Y 4 HOH A 55 455 43 HOH HOH . Y 4 HOH A 56 456 111 HOH HOH . Y 4 HOH A 57 457 47 HOH HOH . Y 4 HOH A 58 458 81 HOH HOH . Y 4 HOH A 59 459 23 HOH HOH . Y 4 HOH A 60 460 106 HOH HOH . Y 4 HOH A 61 461 116 HOH HOH . Y 4 HOH A 62 462 102 HOH HOH . Y 4 HOH A 63 463 15 HOH HOH . Y 4 HOH A 64 464 41 HOH HOH . Y 4 HOH A 65 465 34 HOH HOH . Y 4 HOH A 66 466 17 HOH HOH . Y 4 HOH A 67 467 26 HOH HOH . Y 4 HOH A 68 468 61 HOH HOH . Y 4 HOH A 69 469 59 HOH HOH . Y 4 HOH A 70 470 46 HOH HOH . Y 4 HOH A 71 471 32 HOH HOH . Y 4 HOH A 72 472 74 HOH HOH . Y 4 HOH A 73 473 65 HOH HOH . Y 4 HOH A 74 474 87 HOH HOH . Y 4 HOH A 75 475 30 HOH HOH . Y 4 HOH A 76 476 18 HOH HOH . Y 4 HOH A 77 477 25 HOH HOH . Y 4 HOH A 78 478 85 HOH HOH . Y 4 HOH A 79 479 22 HOH HOH . Y 4 HOH A 80 480 50 HOH HOH . Y 4 HOH A 81 481 38 HOH HOH . Y 4 HOH A 82 482 79 HOH HOH . Y 4 HOH A 83 483 64 HOH HOH . Y 4 HOH A 84 484 54 HOH HOH . Y 4 HOH A 85 485 93 HOH HOH . Y 4 HOH A 86 486 114 HOH HOH . Y 4 HOH A 87 487 62 HOH HOH . Y 4 HOH A 88 488 86 HOH HOH . Y 4 HOH A 89 489 75 HOH HOH . Y 4 HOH A 90 490 84 HOH HOH . Y 4 HOH A 91 491 103 HOH HOH . Y 4 HOH A 92 492 99 HOH HOH . Y 4 HOH A 93 493 117 HOH HOH . Y 4 HOH A 94 494 96 HOH HOH . Y 4 HOH A 95 495 33 HOH HOH . Y 4 HOH A 96 496 113 HOH HOH . Y 4 HOH A 97 497 119 HOH HOH . Y 4 HOH A 98 498 88 HOH HOH . Y 4 HOH A 99 499 55 HOH HOH . Y 4 HOH A 100 500 95 HOH HOH . Y 4 HOH A 101 501 53 HOH HOH . Y 4 HOH A 102 502 48 HOH HOH . Y 4 HOH A 103 503 90 HOH HOH . Y 4 HOH A 104 504 92 HOH HOH . Y 4 HOH A 105 505 67 HOH HOH . Y 4 HOH A 106 506 63 HOH HOH . Y 4 HOH A 107 507 71 HOH HOH . Y 4 HOH A 108 508 68 HOH HOH . Y 4 HOH A 109 509 72 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 LFA . . . V 3 54.372 94.309 271.044 1 84.44 ? C1 LFA 321 A 1 HETATM 2 C C2 LFA . . . V 3 53.853 95.461 271.908 1 91.27 ? C2 LFA 321 A 1 HETATM 3 C C3 LFA . . . V 3 52.638 96.127 271.262 1 75.36 ? C3 LFA 321 A 1 HETATM 4 C C4 LFA . . . V 3 52.933 96.399 269.788 1 75.33 ? C4 LFA 321 A 1 HETATM 5 C C5 LFA . . . V 3 51.923 97.404 269.231 1 82.97 ? C5 LFA 321 A 1 HETATM 6 C C6 LFA . . . V 3 52.376 97.885 267.847 1 80.56 ? C6 LFA 321 A 1 HETATM 7 C C7 LFA . . . V 3 51.226 97.846 266.839 1 89.27 ? C7 LFA 321 A 1 HETATM 8 C C8 LFA . . . V 3 50.385 99.119 266.921 1 94.72 ? C8 LFA 321 A 1 HETATM 9 C C9 LFA . . . V 3 49.103 98.852 267.717 1 96.64 ? C9 LFA 321 A 1 HETATM 10 H H11 LFA . . . V 3 55.057 93.703 271.623 1 101.41 ? H11 LFA 321 A 1 HETATM 11 H H12 LFA . . . V 3 54.887 94.71 270.179 1 101.41 ? H12 LFA 321 A 1 HETATM 12 H H13 LFA . . . V 3 53.539 93.7 270.717 1 101.41 ? H13 LFA 321 A 1 HETATM 13 H H21 LFA . . . V 3 54.639 96.197 272.026 1 109.61 ? H21 LFA 321 A 1 HETATM 14 H H22 LFA . . . V 3 53.57 95.075 272.88 1 109.61 ? H22 LFA 321 A 1 HETATM 15 H H31 LFA . . . V 3 52.427 97.062 271.766 1 90.52 ? H31 LFA 321 A 1 HETATM 16 H H32 LFA . . . V 3 51.78 95.471 271.343 1 90.52 ? H32 LFA 321 A 1 HETATM 17 H H41 LFA . . . V 3 52.862 95.473 269.231 1 90.48 ? H41 LFA 321 A 1 HETATM 18 H H42 LFA . . . V 3 53.933 96.804 269.69 1 90.48 ? H42 LFA 321 A 1 HETATM 19 H H51 LFA . . . V 3 51.853 98.252 269.901 1 99.65 ? H51 LFA 321 A 1 HETATM 20 H H52 LFA . . . V 3 50.953 96.929 269.146 1 99.65 ? H52 LFA 321 A 1 HETATM 21 H H61 LFA . . . V 3 53.175 97.244 267.496 1 96.76 ? H61 LFA 321 A 1 HETATM 22 H H62 LFA . . . V 3 52.739 98.902 267.929 1 96.76 ? H62 LFA 321 A 1 HETATM 23 H H71 LFA . . . V 3 50.596 96.991 267.052 1 107.21 ? H71 LFA 321 A 1 HETATM 24 H H72 LFA . . . V 3 51.633 97.754 265.84 1 107.21 ? H72 LFA 321 A 1 HETATM 25 H H81 LFA . . . V 3 50.125 99.441 265.921 1 113.75 ? H81 LFA 321 A 1 HETATM 26 H H82 LFA . . . V 3 50.957 99.895 267.414 1 113.75 ? H82 LFA 321 A 1 HETATM 27 H H91 LFA . . . V 3 48.496 98.121 267.198 1 116.05 ? H91 LFA 321 A 1 HETATM 28 H H92 LFA . . . V 3 49.353 98.482 268.704 1 116.05 ? H92 LFA 321 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 226 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 28 #