data_8CL8 # _model_server_result.job_id 0rxXR2wSLuzPcyTvyEz0Gw _model_server_result.datetime_utc '2024-11-05 10:54:11' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8cl8 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"T","auth_seq_id":319}' # _entry.id 8CL8 # _exptl.entry_id 8CL8 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 282.547 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description EICOSANE _entity.pdbx_number_of_molecules 25 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8CL8 _cell.length_a 41.46 _cell.length_b 84.89 _cell.length_c 234.95 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8CL8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N ? 2 I N N ? 2 J N N ? 2 K N N ? 2 L N N ? 2 M N N ? 2 N N N ? 2 O N N ? 2 P N N ? 2 Q N N ? 2 R N N ? 2 S N N ? 2 T N N ? 2 U N N ? 2 V N N ? 2 W N N ? 2 X N N ? 2 Y N N ? 2 Z N N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id NZ _struct_conn.ptnr1_label_comp_id LYS _struct_conn.ptnr1_label_seq_id 248 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id LYS _struct_conn.ptnr1_auth_seq_id 255 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id AA _struct_conn.ptnr2_label_atom_id C15 _struct_conn.ptnr2_label_comp_id RET _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id RET _struct_conn.ptnr2_auth_seq_id 326 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.43 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C20 H42' _chem_comp.formula_weight 282.547 _chem_comp.id LFA _chem_comp.mon_nstd_flag . _chem_comp.name EICOSANE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'LIPID FRAGMENT' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 LFA sing 181 n n C1 H11 LFA sing 182 n n C1 H12 LFA sing 183 n n C1 H13 LFA sing 184 n n C2 C3 LFA sing 185 n n C2 H21 LFA sing 186 n n C2 H22 LFA sing 187 n n C3 C4 LFA sing 188 n n C3 H31 LFA sing 189 n n C3 H32 LFA sing 190 n n C4 C5 LFA sing 191 n n C4 H41 LFA sing 192 n n C4 H42 LFA sing 193 n n C5 C6 LFA sing 194 n n C5 H51 LFA sing 195 n n C5 H52 LFA sing 196 n n C6 C7 LFA sing 197 n n C6 H61 LFA sing 198 n n C6 H62 LFA sing 199 n n C7 C8 LFA sing 200 n n C7 H71 LFA sing 201 n n C7 H72 LFA sing 202 n n C8 C9 LFA sing 203 n n C8 H81 LFA sing 204 n n C8 H82 LFA sing 205 n n C9 C10 LFA sing 206 n n C9 H91 LFA sing 207 n n C9 H92 LFA sing 208 n n C10 C11 LFA sing 209 n n C10 H101 LFA sing 210 n n C10 H102 LFA sing 211 n n C11 C12 LFA sing 212 n n C11 H111 LFA sing 213 n n C11 H112 LFA sing 214 n n C12 C13 LFA sing 215 n n C12 H121 LFA sing 216 n n C12 H122 LFA sing 217 n n C13 C14 LFA sing 218 n n C13 H131 LFA sing 219 n n C13 H132 LFA sing 220 n n C14 C15 LFA sing 221 n n C14 H141 LFA sing 222 n n C14 H142 LFA sing 223 n n C15 C16 LFA sing 224 n n C15 H151 LFA sing 225 n n C15 H152 LFA sing 226 n n C16 C17 LFA sing 227 n n C16 H161 LFA sing 228 n n C16 H162 LFA sing 229 n n C17 C18 LFA sing 230 n n C17 H171 LFA sing 231 n n C17 H172 LFA sing 232 n n C18 C19 LFA sing 233 n n C18 H181 LFA sing 234 n n C18 H182 LFA sing 235 n n C19 C20 LFA sing 236 n n C19 H191 LFA sing 237 n n C19 H192 LFA sing 238 n n C20 H201 LFA sing 239 n n C20 H202 LFA sing 240 n n C20 H203 LFA sing 241 n n # _atom_sites.entry_id 8CL8 _atom_sites.fract_transf_matrix[1][1] 0.02412 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01178 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004256 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 LFA A 1 301 402 LFA LFA . C 2 LFA A 1 302 403 LFA LFA . D 2 LFA A 1 303 404 LFA LFA . E 2 LFA A 1 304 405 LFA LFA . F 2 LFA A 1 305 407 LFA LFA . G 2 LFA A 1 306 408 LFA LFA . H 2 LFA A 1 307 410 LFA LFA . I 2 LFA A 1 308 411 LFA LFA . J 2 LFA A 1 309 412 LFA LFA . K 2 LFA A 1 310 413 LFA LFA . L 2 LFA A 1 311 414 LFA LFA . M 2 LFA A 1 312 415 LFA LFA . N 2 LFA A 1 313 416 LFA LFA . O 2 LFA A 1 314 417 LFA LFA . P 2 LFA A 1 315 418 LFA LFA . Q 2 LFA A 1 316 419 LFA LFA . R 2 LFA A 1 317 420 LFA LFA . S 2 LFA A 1 318 421 LFA LFA . T 2 LFA A 1 319 422 LFA LFA . U 2 LFA A 1 320 423 LFA LFA . V 2 LFA A 1 321 424 LFA LFA . W 2 LFA A 1 322 425 LFA LFA . X 2 LFA A 1 323 426 LFA LFA . Y 2 LFA A 1 324 427 LFA LFA . Z 2 LFA A 1 325 428 LFA LFA . AA 3 RET A 1 326 301 RET RET . BA 4 HOH A 1 401 47 HOH HOH . BA 4 HOH A 2 402 13 HOH HOH . BA 4 HOH A 3 403 49 HOH HOH . BA 4 HOH A 4 404 58 HOH HOH . BA 4 HOH A 5 405 41 HOH HOH . BA 4 HOH A 6 406 31 HOH HOH . BA 4 HOH A 7 407 10 HOH HOH . BA 4 HOH A 8 408 17 HOH HOH . BA 4 HOH A 9 409 28 HOH HOH . BA 4 HOH A 10 410 21 HOH HOH . BA 4 HOH A 11 411 1 HOH HOH . BA 4 HOH A 12 412 9 HOH HOH . BA 4 HOH A 13 413 24 HOH HOH . BA 4 HOH A 14 414 45 HOH HOH . BA 4 HOH A 15 415 3 HOH HOH . BA 4 HOH A 16 416 52 HOH HOH . BA 4 HOH A 17 417 4 HOH HOH . BA 4 HOH A 18 418 5 HOH HOH . BA 4 HOH A 19 419 43 HOH HOH . BA 4 HOH A 20 420 59 HOH HOH . BA 4 HOH A 21 421 7 HOH HOH . BA 4 HOH A 22 422 12 HOH HOH . BA 4 HOH A 23 423 48 HOH HOH . BA 4 HOH A 24 424 40 HOH HOH . BA 4 HOH A 25 425 22 HOH HOH . BA 4 HOH A 26 426 42 HOH HOH . BA 4 HOH A 27 427 51 HOH HOH . BA 4 HOH A 28 428 65 HOH HOH . BA 4 HOH A 29 429 23 HOH HOH . BA 4 HOH A 30 430 39 HOH HOH . BA 4 HOH A 31 431 6 HOH HOH . BA 4 HOH A 32 432 27 HOH HOH . BA 4 HOH A 33 433 2 HOH HOH . BA 4 HOH A 34 434 8 HOH HOH . BA 4 HOH A 35 435 11 HOH HOH . BA 4 HOH A 36 436 64 HOH HOH . BA 4 HOH A 37 437 60 HOH HOH . BA 4 HOH A 38 438 35 HOH HOH . BA 4 HOH A 39 439 33 HOH HOH . BA 4 HOH A 40 440 46 HOH HOH . BA 4 HOH A 41 441 38 HOH HOH . BA 4 HOH A 42 442 18 HOH HOH . BA 4 HOH A 43 443 29 HOH HOH . BA 4 HOH A 44 444 20 HOH HOH . BA 4 HOH A 45 445 19 HOH HOH . BA 4 HOH A 46 446 32 HOH HOH . BA 4 HOH A 47 447 61 HOH HOH . BA 4 HOH A 48 448 26 HOH HOH . BA 4 HOH A 49 449 37 HOH HOH . BA 4 HOH A 50 450 34 HOH HOH . BA 4 HOH A 51 451 53 HOH HOH . BA 4 HOH A 52 452 30 HOH HOH . BA 4 HOH A 53 453 62 HOH HOH . BA 4 HOH A 54 454 66 HOH HOH . BA 4 HOH A 55 455 63 HOH HOH . BA 4 HOH A 56 456 16 HOH HOH . BA 4 HOH A 57 457 36 HOH HOH . BA 4 HOH A 58 458 15 HOH HOH . BA 4 HOH A 59 459 57 HOH HOH . BA 4 HOH A 60 460 14 HOH HOH . BA 4 HOH A 61 461 54 HOH HOH . BA 4 HOH A 62 462 56 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 LFA . . . T 2 46.845 106.057 253.48 1 50.19 ? C1 LFA 319 A 1 HETATM 2 C C2 LFA . . . T 2 45.748 105.025 253.227 1 67.51 ? C2 LFA 319 A 1 HETATM 3 C C3 LFA . . . T 2 45.781 104.585 251.765 1 66.68 ? C3 LFA 319 A 1 HETATM 4 C C4 LFA . . . T 2 44.618 103.633 251.492 1 73.71 ? C4 LFA 319 A 1 HETATM 5 C C5 LFA . . . T 2 44.529 103.338 249.995 1 78.38 ? C5 LFA 319 A 1 HETATM 6 C C6 LFA . . . T 2 44.224 104.624 249.229 1 64.58 ? C6 LFA 319 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 272 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 6 #