data_8CL8
#
_model_server_result.job_id            43YgHSwPa1MXEWUMJaQEiA 
_model_server_result.datetime_utc      '2024-11-27 09:06:58' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8cl8 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"Y","auth_seq_id":324}' 
#
_entry.id    8CL8 
#
_exptl.entry_id    8CL8 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              282.547 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            EICOSANE 
_entity.pdbx_number_of_molecules    25 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8CL8 
_cell.length_a            41.46 
_cell.length_b            84.89 
_cell.length_c            234.95 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8CL8 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        23 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'I 2 2 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 B N N 
? 2 C N N 
? 2 D N N 
? 2 E N N 
? 2 F N N 
? 2 G N N 
? 2 H N N 
? 2 I N N 
? 2 J N N 
? 2 K N N 
? 2 L N N 
? 2 M N N 
? 2 N N N 
? 2 O N N 
? 2 P N N 
? 2 Q N N 
? 2 R N N 
? 2 S N N 
? 2 T N N 
? 2 U N N 
? 2 V N N 
? 2 W N N 
? 2 X N N 
? 2 Y N N 
? 2 Z N N 
#
_struct_conn.conn_type_id                   covale 
_struct_conn.details                        ? 
_struct_conn.id                             covale1 
_struct_conn.ptnr1_label_asym_id            A 
_struct_conn.ptnr1_label_atom_id            NZ 
_struct_conn.ptnr1_label_comp_id            LYS 
_struct_conn.ptnr1_label_seq_id             248 
_struct_conn.ptnr1_auth_asym_id             A 
_struct_conn.ptnr1_auth_comp_id             LYS 
_struct_conn.ptnr1_auth_seq_id              255 
_struct_conn.ptnr1_symmetry                 1_555 
_struct_conn.ptnr2_label_asym_id            AA 
_struct_conn.ptnr2_label_atom_id            C15 
_struct_conn.ptnr2_label_comp_id            RET 
_struct_conn.ptnr2_label_seq_id             . 
_struct_conn.ptnr2_auth_asym_id             A 
_struct_conn.ptnr2_auth_comp_id             RET 
_struct_conn.ptnr2_auth_seq_id              326 
_struct_conn.ptnr2_symmetry                 1_555 
_struct_conn.pdbx_ptnr1_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr1_label_alt_id        ? 
_struct_conn.pdbx_ptnr1_standard_comp_id    ? 
_struct_conn.pdbx_ptnr2_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr2_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr3_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_label_asym_id       ? 
_struct_conn.pdbx_ptnr3_label_atom_id       ? 
_struct_conn.pdbx_ptnr3_label_comp_id       ? 
_struct_conn.pdbx_ptnr3_label_seq_id        ? 
_struct_conn.pdbx_PDB_id                    ? 
_struct_conn.pdbx_dist_value                1.43 
_struct_conn.pdbx_value_order               ? 
#
_chem_comp.formula           'C20 H42' 
_chem_comp.formula_weight    282.547 
_chem_comp.id                LFA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              EICOSANE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'LIPID FRAGMENT' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 LFA sing 181 n n 
C1 H11 LFA sing 182 n n 
C1 H12 LFA sing 183 n n 
C1 H13 LFA sing 184 n n 
C2 C3 LFA sing 185 n n 
C2 H21 LFA sing 186 n n 
C2 H22 LFA sing 187 n n 
C3 C4 LFA sing 188 n n 
C3 H31 LFA sing 189 n n 
C3 H32 LFA sing 190 n n 
C4 C5 LFA sing 191 n n 
C4 H41 LFA sing 192 n n 
C4 H42 LFA sing 193 n n 
C5 C6 LFA sing 194 n n 
C5 H51 LFA sing 195 n n 
C5 H52 LFA sing 196 n n 
C6 C7 LFA sing 197 n n 
C6 H61 LFA sing 198 n n 
C6 H62 LFA sing 199 n n 
C7 C8 LFA sing 200 n n 
C7 H71 LFA sing 201 n n 
C7 H72 LFA sing 202 n n 
C8 C9 LFA sing 203 n n 
C8 H81 LFA sing 204 n n 
C8 H82 LFA sing 205 n n 
C9 C10 LFA sing 206 n n 
C9 H91 LFA sing 207 n n 
C9 H92 LFA sing 208 n n 
C10 C11 LFA sing 209 n n 
C10 H101 LFA sing 210 n n 
C10 H102 LFA sing 211 n n 
C11 C12 LFA sing 212 n n 
C11 H111 LFA sing 213 n n 
C11 H112 LFA sing 214 n n 
C12 C13 LFA sing 215 n n 
C12 H121 LFA sing 216 n n 
C12 H122 LFA sing 217 n n 
C13 C14 LFA sing 218 n n 
C13 H131 LFA sing 219 n n 
C13 H132 LFA sing 220 n n 
C14 C15 LFA sing 221 n n 
C14 H141 LFA sing 222 n n 
C14 H142 LFA sing 223 n n 
C15 C16 LFA sing 224 n n 
C15 H151 LFA sing 225 n n 
C15 H152 LFA sing 226 n n 
C16 C17 LFA sing 227 n n 
C16 H161 LFA sing 228 n n 
C16 H162 LFA sing 229 n n 
C17 C18 LFA sing 230 n n 
C17 H171 LFA sing 231 n n 
C17 H172 LFA sing 232 n n 
C18 C19 LFA sing 233 n n 
C18 H181 LFA sing 234 n n 
C18 H182 LFA sing 235 n n 
C19 C20 LFA sing 236 n n 
C19 H191 LFA sing 237 n n 
C19 H192 LFA sing 238 n n 
C20 H201 LFA sing 239 n n 
C20 H202 LFA sing 240 n n 
C20 H203 LFA sing 241 n n 
#
_atom_sites.entry_id                     8CL8 
_atom_sites.fract_transf_matrix[1][1]    0.02412 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.01178 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.004256 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 LFA A 1 301 402 LFA LFA . 
C 2 LFA A 1 302 403 LFA LFA . 
D 2 LFA A 1 303 404 LFA LFA . 
E 2 LFA A 1 304 405 LFA LFA . 
F 2 LFA A 1 305 407 LFA LFA . 
G 2 LFA A 1 306 408 LFA LFA . 
H 2 LFA A 1 307 410 LFA LFA . 
I 2 LFA A 1 308 411 LFA LFA . 
J 2 LFA A 1 309 412 LFA LFA . 
K 2 LFA A 1 310 413 LFA LFA . 
L 2 LFA A 1 311 414 LFA LFA . 
M 2 LFA A 1 312 415 LFA LFA . 
N 2 LFA A 1 313 416 LFA LFA . 
O 2 LFA A 1 314 417 LFA LFA . 
P 2 LFA A 1 315 418 LFA LFA . 
Q 2 LFA A 1 316 419 LFA LFA . 
R 2 LFA A 1 317 420 LFA LFA . 
S 2 LFA A 1 318 421 LFA LFA . 
T 2 LFA A 1 319 422 LFA LFA . 
U 2 LFA A 1 320 423 LFA LFA . 
V 2 LFA A 1 321 424 LFA LFA . 
W 2 LFA A 1 322 425 LFA LFA . 
X 2 LFA A 1 323 426 LFA LFA . 
Y 2 LFA A 1 324 427 LFA LFA . 
Z 2 LFA A 1 325 428 LFA LFA . 
AA 3 RET A 1 326 301 RET RET . 
BA 4 HOH A 1 401 47 HOH HOH . 
BA 4 HOH A 2 402 13 HOH HOH . 
BA 4 HOH A 3 403 49 HOH HOH . 
BA 4 HOH A 4 404 58 HOH HOH . 
BA 4 HOH A 5 405 41 HOH HOH . 
BA 4 HOH A 6 406 31 HOH HOH . 
BA 4 HOH A 7 407 10 HOH HOH . 
BA 4 HOH A 8 408 17 HOH HOH . 
BA 4 HOH A 9 409 28 HOH HOH . 
BA 4 HOH A 10 410 21 HOH HOH . 
BA 4 HOH A 11 411 1 HOH HOH . 
BA 4 HOH A 12 412 9 HOH HOH . 
BA 4 HOH A 13 413 24 HOH HOH . 
BA 4 HOH A 14 414 45 HOH HOH . 
BA 4 HOH A 15 415 3 HOH HOH . 
BA 4 HOH A 16 416 52 HOH HOH . 
BA 4 HOH A 17 417 4 HOH HOH . 
BA 4 HOH A 18 418 5 HOH HOH . 
BA 4 HOH A 19 419 43 HOH HOH . 
BA 4 HOH A 20 420 59 HOH HOH . 
BA 4 HOH A 21 421 7 HOH HOH . 
BA 4 HOH A 22 422 12 HOH HOH . 
BA 4 HOH A 23 423 48 HOH HOH . 
BA 4 HOH A 24 424 40 HOH HOH . 
BA 4 HOH A 25 425 22 HOH HOH . 
BA 4 HOH A 26 426 42 HOH HOH . 
BA 4 HOH A 27 427 51 HOH HOH . 
BA 4 HOH A 28 428 65 HOH HOH . 
BA 4 HOH A 29 429 23 HOH HOH . 
BA 4 HOH A 30 430 39 HOH HOH . 
BA 4 HOH A 31 431 6 HOH HOH . 
BA 4 HOH A 32 432 27 HOH HOH . 
BA 4 HOH A 33 433 2 HOH HOH . 
BA 4 HOH A 34 434 8 HOH HOH . 
BA 4 HOH A 35 435 11 HOH HOH . 
BA 4 HOH A 36 436 64 HOH HOH . 
BA 4 HOH A 37 437 60 HOH HOH . 
BA 4 HOH A 38 438 35 HOH HOH . 
BA 4 HOH A 39 439 33 HOH HOH . 
BA 4 HOH A 40 440 46 HOH HOH . 
BA 4 HOH A 41 441 38 HOH HOH . 
BA 4 HOH A 42 442 18 HOH HOH . 
BA 4 HOH A 43 443 29 HOH HOH . 
BA 4 HOH A 44 444 20 HOH HOH . 
BA 4 HOH A 45 445 19 HOH HOH . 
BA 4 HOH A 46 446 32 HOH HOH . 
BA 4 HOH A 47 447 61 HOH HOH . 
BA 4 HOH A 48 448 26 HOH HOH . 
BA 4 HOH A 49 449 37 HOH HOH . 
BA 4 HOH A 50 450 34 HOH HOH . 
BA 4 HOH A 51 451 53 HOH HOH . 
BA 4 HOH A 52 452 30 HOH HOH . 
BA 4 HOH A 53 453 62 HOH HOH . 
BA 4 HOH A 54 454 66 HOH HOH . 
BA 4 HOH A 55 455 63 HOH HOH . 
BA 4 HOH A 56 456 16 HOH HOH . 
BA 4 HOH A 57 457 36 HOH HOH . 
BA 4 HOH A 58 458 15 HOH HOH . 
BA 4 HOH A 59 459 57 HOH HOH . 
BA 4 HOH A 60 460 14 HOH HOH . 
BA 4 HOH A 61 461 54 HOH HOH . 
BA 4 HOH A 62 462 56 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 LFA . . . Y 2 70.76 121.033 268.786 1 45.23 ? C1 LFA 324 A 1 
HETATM 2 C C2 LFA . . . Y 2 69.264 121.042 268.48 1 36.85 ? C2 LFA 324 A 1 
HETATM 3 C C3 LFA . . . Y 2 69.048 121.406 267.013 1 48.67 ? C3 LFA 324 A 1 
HETATM 4 C C4 LFA . . . Y 2 69.801 120.412 266.131 1 57.63 ? C4 LFA 324 A 1 
HETATM 5 C C5 LFA . . . Y 2 69.891 120.95 264.705 1 64.29 ? C5 LFA 324 A 1 
HETATM 6 C C6 LFA . . . Y 2 70.786 120.029 263.878 1 66.33 ? C6 LFA 324 A 1 
HETATM 7 C C7 LFA . . . Y 2 71.027 120.64 262.498 1 57.96 ? C7 LFA 324 A 1 
HETATM 8 C C8 LFA . . . Y 2 69.717 120.663 261.715 1 55.66 ? C8 LFA 324 A 1 
HETATM 9 C C9 LFA . . . Y 2 70.013 121 260.255 1 63.48 ? C9 LFA 324 A 1 
HETATM 10 C C10 LFA . . . Y 2 68.718 120.971 259.446 1 53.82 ? C10 LFA 324 A 1 
HETATM 11 C C11 LFA . . . Y 2 69.032 121.245 257.977 1 58.87 ? C11 LFA 324 A 1 
HETATM 12 C C12 LFA . . . Y 2 70.026 120.205 257.462 1 56.9 ? C12 LFA 324 A 1 
#
_model_server_stats.io_time_ms              13 
_model_server_stats.parse_time_ms           15 
_model_server_stats.create_model_time_ms    22 
_model_server_stats.query_time_ms           535 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           12 
#