data_8CME
#
_model_server_result.job_id            0DHF4QkqGjQYqJ8rii37hg 
_model_server_result.datetime_utc      '2024-11-15 01:34:05' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8cme 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"K","auth_seq_id":202}' 
#
_entry.id    8CME 
#
_exptl.entry_id    8CME 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8CME 
_cell.length_a            113.374 
_cell.length_b            156.766 
_cell.length_c            165.454 
_cell.Z_PDB               24 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8CME 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        20 
_symmetry.space_group_name_Hall    'C 2c 2' 
_symmetry.space_group_name_H-M     'C 2 2 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? trimeric 3 author_defined_assembly 1 
? trimeric 3 author_defined_assembly 2 
? trimeric 3 author_defined_assembly 3 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,C,J,K,M,N,O 1 1 
D,E,F,L,P,Q,R 2 1 
G,H,I,S,T 3 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 5 K N N 
? 5 L N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 108 A CYS 107 1_555 A SG CYS 164 A CYS 163 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? 
disulf ? disulf2 B SG CYS 19 B CYS 15 1_555 B SG CYS 83 B CYS 79 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.057 ? 
disulf ? disulf3 B SG CYS 121 B CYS 117 1_555 B SG CYS 177 B CYS 173 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.009 ? 
disulf ? disulf4 D SG CYS 108 D CYS 107 1_555 D SG CYS 164 D CYS 163 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? 
disulf ? disulf5 E SG CYS 19 E CYS 15 1_555 E SG CYS 83 E CYS 79 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? 
disulf ? disulf6 E SG CYS 121 E CYS 117 1_555 E SG CYS 177 E CYS 173 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? 
disulf ? disulf7 G SG CYS 108 G CYS 107 1_555 G SG CYS 164 G CYS 163 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf8 H SG CYS 19 H CYS 15 1_555 H SG CYS 83 H CYS 79 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.063 ? 
disulf ? disulf9 H SG CYS 121 H CYS 117 1_555 H SG CYS 177 H CYS 173 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 83 n n 
C1 C2 EDO sing 84 n n 
C1 H11 EDO sing 85 n n 
C1 H12 EDO sing 86 n n 
O1 HO1 EDO sing 87 n n 
C2 O2 EDO sing 88 n n 
C2 H21 EDO sing 89 n n 
C2 H22 EDO sing 90 n n 
O2 HO2 EDO sing 91 n n 
#
_atom_sites.entry_id                     8CME 
_atom_sites.fract_transf_matrix[1][1]    0.00882 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.006379 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006044 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
J 4 MES B 1 201 1 MES MES . 
K 5 EDO B 1 202 202 EDO EDO . 
L 5 EDO D 1 201 201 EDO EDO . 
M 6 HOH A 1 201 64 HOH HOH . 
M 6 HOH A 2 202 84 HOH HOH . 
M 6 HOH A 3 203 21 HOH HOH . 
M 6 HOH A 4 204 88 HOH HOH . 
M 6 HOH A 5 205 68 HOH HOH . 
M 6 HOH A 6 206 66 HOH HOH . 
M 6 HOH A 7 207 26 HOH HOH . 
M 6 HOH A 8 208 67 HOH HOH . 
M 6 HOH A 9 209 32 HOH HOH . 
M 6 HOH A 10 210 48 HOH HOH . 
M 6 HOH A 11 211 54 HOH HOH . 
M 6 HOH A 12 212 22 HOH HOH . 
M 6 HOH A 13 213 43 HOH HOH . 
M 6 HOH A 14 214 55 HOH HOH . 
M 6 HOH A 15 215 81 HOH HOH . 
M 6 HOH A 16 216 5 HOH HOH . 
M 6 HOH A 17 217 74 HOH HOH . 
M 6 HOH A 18 218 69 HOH HOH . 
M 6 HOH A 19 219 39 HOH HOH . 
M 6 HOH A 20 220 59 HOH HOH . 
M 6 HOH A 21 221 76 HOH HOH . 
N 6 HOH B 1 301 56 HOH HOH . 
N 6 HOH B 2 302 60 HOH HOH . 
N 6 HOH B 3 303 10 HOH HOH . 
N 6 HOH B 4 304 12 HOH HOH . 
N 6 HOH B 5 305 15 HOH HOH . 
N 6 HOH B 6 306 47 HOH HOH . 
N 6 HOH B 7 307 14 HOH HOH . 
N 6 HOH B 8 308 44 HOH HOH . 
N 6 HOH B 9 309 30 HOH HOH . 
N 6 HOH B 10 310 6 HOH HOH . 
N 6 HOH B 11 311 40 HOH HOH . 
N 6 HOH B 12 312 34 HOH HOH . 
N 6 HOH B 13 313 1 HOH HOH . 
O 6 HOH C 1 101 61 HOH HOH . 
O 6 HOH C 2 102 82 HOH HOH . 
P 6 HOH D 1 301 86 HOH HOH . 
P 6 HOH D 2 302 7 HOH HOH . 
P 6 HOH D 3 303 58 HOH HOH . 
P 6 HOH D 4 304 50 HOH HOH . 
P 6 HOH D 5 305 85 HOH HOH . 
P 6 HOH D 6 306 8 HOH HOH . 
P 6 HOH D 7 307 3 HOH HOH . 
P 6 HOH D 8 308 24 HOH HOH . 
P 6 HOH D 9 309 28 HOH HOH . 
P 6 HOH D 10 310 13 HOH HOH . 
P 6 HOH D 11 311 38 HOH HOH . 
P 6 HOH D 12 312 11 HOH HOH . 
P 6 HOH D 13 313 9 HOH HOH . 
P 6 HOH D 14 314 75 HOH HOH . 
P 6 HOH D 15 315 89 HOH HOH . 
P 6 HOH D 16 316 29 HOH HOH . 
P 6 HOH D 17 317 19 HOH HOH . 
Q 6 HOH E 1 201 49 HOH HOH . 
Q 6 HOH E 2 202 57 HOH HOH . 
Q 6 HOH E 3 203 70 HOH HOH . 
Q 6 HOH E 4 204 45 HOH HOH . 
R 6 HOH F 1 101 77 HOH HOH . 
S 6 HOH G 1 201 53 HOH HOH . 
S 6 HOH G 2 202 83 HOH HOH . 
S 6 HOH G 3 203 2 HOH HOH . 
S 6 HOH G 4 204 18 HOH HOH . 
S 6 HOH G 5 205 52 HOH HOH . 
S 6 HOH G 6 206 73 HOH HOH . 
S 6 HOH G 7 207 25 HOH HOH . 
S 6 HOH G 8 208 16 HOH HOH . 
S 6 HOH G 9 209 71 HOH HOH . 
S 6 HOH G 10 210 80 HOH HOH . 
S 6 HOH G 11 211 63 HOH HOH . 
S 6 HOH G 12 212 72 HOH HOH . 
S 6 HOH G 13 213 46 HOH HOH . 
S 6 HOH G 14 214 65 HOH HOH . 
S 6 HOH G 15 215 23 HOH HOH . 
S 6 HOH G 16 216 36 HOH HOH . 
S 6 HOH G 17 217 41 HOH HOH . 
S 6 HOH G 18 218 42 HOH HOH . 
T 6 HOH H 1 201 35 HOH HOH . 
T 6 HOH H 2 202 31 HOH HOH . 
T 6 HOH H 3 203 51 HOH HOH . 
T 6 HOH H 4 204 17 HOH HOH . 
T 6 HOH H 5 205 4 HOH HOH . 
T 6 HOH H 6 206 20 HOH HOH . 
T 6 HOH H 7 207 87 HOH HOH . 
T 6 HOH H 8 208 33 HOH HOH . 
T 6 HOH H 9 209 37 HOH HOH . 
T 6 HOH H 10 210 79 HOH HOH . 
T 6 HOH H 11 211 27 HOH HOH . 
T 6 HOH H 12 212 78 HOH HOH . 
T 6 HOH H 13 213 62 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . K 5 46.707 67.516 -30.015 1 69.16 ? C1 EDO 202 B 1 
HETATM 2 O O1 EDO . . . K 5 46.62 66.694 -31.178 1 79.31 ? O1 EDO 202 B 1 
HETATM 3 C C2 EDO . . . K 5 48.072 67.375 -29.398 1 65.51 ? C2 EDO 202 B 1 
HETATM 4 O O2 EDO . . . K 5 48.602 68.669 -29.108 1 66.49 ? O2 EDO 202 B 1 
#
_model_server_stats.io_time_ms              64 
_model_server_stats.parse_time_ms           35 
_model_server_stats.create_model_time_ms    18 
_model_server_stats.query_time_ms           535 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           4 
#