data_8CN7 # _model_server_result.job_id q_nHMXEKkLED87wk8XeTpA _model_server_result.datetime_utc '2024-11-25 22:20:41' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8cn7 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"T","auth_seq_id":504}' # _entry.id 8CN7 # _exptl.entry_id 8CN7 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 78.133 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'DIMETHYL SULFOXIDE' _entity.pdbx_number_of_molecules 26 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 106.3 _cell.angle_gamma 90 _cell.entry_id 8CN7 _cell.length_a 71.001 _cell.length_b 64.779 _cell.length_c 84.586 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8CN7 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N ? 2 I N N ? 2 J N N ? 2 K N N ? 2 L N N ? 2 M N N ? 2 O N N ? 2 P N N ? 2 Q N N ? 2 R N N ? 2 S N N ? 2 T N N ? 2 U N N ? 2 V N N ? 2 W N N ? 2 X N N ? 2 Y N N ? 2 Z N N ? 2 AA N N ? 2 BA N N ? 2 CA N N # _chem_comp.formula 'C2 H6 O S' _chem_comp.formula_weight 78.133 _chem_comp.id DMS _chem_comp.mon_nstd_flag . _chem_comp.name 'DIMETHYL SULFOXIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O DMS doub 83 n n S C1 DMS sing 84 n n S C2 DMS sing 85 n n C1 H11 DMS sing 86 n n C1 H12 DMS sing 87 n n C1 H13 DMS sing 88 n n C2 H21 DMS sing 89 n n C2 H22 DMS sing 90 n n C2 H23 DMS sing 91 n n # _atom_sites.entry_id 8CN7 _atom_sites.fract_transf_matrix[1][1] 0.014084 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004119 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015437 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012317 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 DMS A 1 501 501 DMS DMS . D 2 DMS A 1 502 502 DMS DMS . E 2 DMS A 1 503 503 DMS DMS . F 2 DMS A 1 504 504 DMS DMS . G 2 DMS A 1 505 505 DMS DMS . H 2 DMS A 1 506 506 DMS DMS . I 2 DMS A 1 507 507 DMS DMS . J 2 DMS A 1 508 508 DMS DMS . K 2 DMS A 1 509 509 DMS DMS . L 2 DMS A 1 510 510 DMS DMS . M 2 DMS A 1 511 512 DMS DMS . N 3 N32 A 1 512 513 N32 DRG . O 2 DMS A 1 513 514 DMS DMS . P 2 DMS A 1 514 509 DMS DMS . Q 2 DMS B 1 501 501 DMS DMS . R 2 DMS B 1 502 502 DMS DMS . S 2 DMS B 1 503 503 DMS DMS . T 2 DMS B 1 504 504 DMS DMS . U 2 DMS B 1 505 505 DMS DMS . V 2 DMS B 1 506 506 DMS DMS . W 2 DMS B 1 507 507 DMS DMS . X 2 DMS B 1 508 508 DMS DMS . Y 2 DMS B 1 509 510 DMS DMS . Z 2 DMS B 1 510 511 DMS DMS . AA 2 DMS B 1 511 512 DMS DMS . BA 2 DMS B 1 512 513 DMS DMS . CA 2 DMS B 1 513 514 DMS DMS . DA 3 N32 B 1 514 515 N32 DRG . EA 4 HOH A 1 601 92 HOH HOH . EA 4 HOH A 2 602 35 HOH HOH . EA 4 HOH A 3 603 155 HOH HOH . EA 4 HOH A 4 604 165 HOH HOH . EA 4 HOH A 5 605 123 HOH HOH . EA 4 HOH A 6 606 18 HOH HOH . EA 4 HOH A 7 607 154 HOH HOH . EA 4 HOH A 8 608 28 HOH HOH . EA 4 HOH A 9 609 114 HOH HOH . EA 4 HOH A 10 610 124 HOH HOH . EA 4 HOH A 11 611 77 HOH HOH . EA 4 HOH A 12 612 129 HOH HOH . EA 4 HOH A 13 613 110 HOH HOH . EA 4 HOH A 14 614 113 HOH HOH . EA 4 HOH A 15 615 163 HOH HOH . EA 4 HOH A 16 616 101 HOH HOH . EA 4 HOH A 17 617 29 HOH HOH . EA 4 HOH A 18 618 60 HOH HOH . EA 4 HOH A 19 619 59 HOH HOH . EA 4 HOH A 20 620 138 HOH HOH . EA 4 HOH A 21 621 64 HOH HOH . EA 4 HOH A 22 622 79 HOH HOH . EA 4 HOH A 23 623 84 HOH HOH . EA 4 HOH A 24 624 89 HOH HOH . EA 4 HOH A 25 625 39 HOH HOH . EA 4 HOH A 26 626 158 HOH HOH . EA 4 HOH A 27 627 65 HOH HOH . EA 4 HOH A 28 628 159 HOH HOH . EA 4 HOH A 29 629 78 HOH HOH . EA 4 HOH A 30 630 107 HOH HOH . EA 4 HOH A 31 631 195 HOH HOH . EA 4 HOH A 32 632 95 HOH HOH . EA 4 HOH A 33 633 127 HOH HOH . EA 4 HOH A 34 634 94 HOH HOH . EA 4 HOH A 35 635 111 HOH HOH . EA 4 HOH A 36 636 186 HOH HOH . EA 4 HOH A 37 637 109 HOH HOH . EA 4 HOH A 38 638 27 HOH HOH . EA 4 HOH A 39 639 131 HOH HOH . EA 4 HOH A 40 640 42 HOH HOH . EA 4 HOH A 41 641 126 HOH HOH . EA 4 HOH A 42 642 140 HOH HOH . EA 4 HOH A 43 643 51 HOH HOH . EA 4 HOH A 44 644 37 HOH HOH . EA 4 HOH A 45 645 87 HOH HOH . EA 4 HOH A 46 646 106 HOH HOH . EA 4 HOH A 47 647 188 HOH HOH . EA 4 HOH A 48 648 119 HOH HOH . EA 4 HOH A 49 649 83 HOH HOH . EA 4 HOH A 50 650 24 HOH HOH . EA 4 HOH A 51 651 166 HOH HOH . EA 4 HOH A 52 652 160 HOH HOH . EA 4 HOH A 53 653 115 HOH HOH . EA 4 HOH A 54 654 190 HOH HOH . EA 4 HOH A 55 655 11 HOH HOH . EA 4 HOH A 56 656 152 HOH HOH . EA 4 HOH A 57 657 63 HOH HOH . EA 4 HOH A 58 658 72 HOH HOH . EA 4 HOH A 59 659 96 HOH HOH . EA 4 HOH A 60 660 41 HOH HOH . EA 4 HOH A 61 661 15 HOH HOH . EA 4 HOH A 62 662 100 HOH HOH . EA 4 HOH A 63 663 38 HOH HOH . EA 4 HOH A 64 664 90 HOH HOH . EA 4 HOH A 65 665 102 HOH HOH . EA 4 HOH A 66 666 80 HOH HOH . EA 4 HOH A 67 667 32 HOH HOH . EA 4 HOH A 68 668 189 HOH HOH . EA 4 HOH A 69 669 19 HOH HOH . EA 4 HOH A 70 670 176 HOH HOH . EA 4 HOH A 71 671 174 HOH HOH . EA 4 HOH A 72 672 2 HOH HOH . EA 4 HOH A 73 673 105 HOH HOH . EA 4 HOH A 74 674 23 HOH HOH . EA 4 HOH A 75 675 197 HOH HOH . EA 4 HOH A 76 676 9 HOH HOH . EA 4 HOH A 77 677 53 HOH HOH . EA 4 HOH A 78 678 44 HOH HOH . EA 4 HOH A 79 679 21 HOH HOH . EA 4 HOH A 80 680 86 HOH HOH . EA 4 HOH A 81 681 43 HOH HOH . EA 4 HOH A 82 682 139 HOH HOH . EA 4 HOH A 83 683 14 HOH HOH . EA 4 HOH A 84 684 170 HOH HOH . EA 4 HOH A 85 685 180 HOH HOH . EA 4 HOH A 86 686 202 HOH HOH . EA 4 HOH A 87 687 200 HOH HOH . EA 4 HOH A 88 688 191 HOH HOH . EA 4 HOH A 89 689 201 HOH HOH . EA 4 HOH A 90 690 142 HOH HOH . EA 4 HOH A 91 691 194 HOH HOH . EA 4 HOH A 92 692 199 HOH HOH . EA 4 HOH A 93 693 198 HOH HOH . EA 4 HOH A 94 694 57 HOH HOH . EA 4 HOH A 95 695 118 HOH HOH . EA 4 HOH A 96 696 177 HOH HOH . EA 4 HOH A 97 697 68 HOH HOH . EA 4 HOH A 98 698 137 HOH HOH . FA 4 HOH B 1 601 120 HOH HOH . FA 4 HOH B 2 602 98 HOH HOH . FA 4 HOH B 3 603 17 HOH HOH . FA 4 HOH B 4 604 34 HOH HOH . FA 4 HOH B 5 605 173 HOH HOH . FA 4 HOH B 6 606 103 HOH HOH . FA 4 HOH B 7 607 164 HOH HOH . FA 4 HOH B 8 608 128 HOH HOH . FA 4 HOH B 9 609 172 HOH HOH . FA 4 HOH B 10 610 112 HOH HOH . FA 4 HOH B 11 611 144 HOH HOH . FA 4 HOH B 12 612 133 HOH HOH . FA 4 HOH B 13 613 31 HOH HOH . FA 4 HOH B 14 614 85 HOH HOH . FA 4 HOH B 15 615 156 HOH HOH . FA 4 HOH B 16 616 46 HOH HOH . FA 4 HOH B 17 617 117 HOH HOH . FA 4 HOH B 18 618 10 HOH HOH . FA 4 HOH B 19 619 22 HOH HOH . FA 4 HOH B 20 620 76 HOH HOH . FA 4 HOH B 21 621 58 HOH HOH . FA 4 HOH B 22 622 61 HOH HOH . FA 4 HOH B 23 623 162 HOH HOH . FA 4 HOH B 24 624 47 HOH HOH . FA 4 HOH B 25 625 97 HOH HOH . FA 4 HOH B 26 626 153 HOH HOH . FA 4 HOH B 27 627 40 HOH HOH . FA 4 HOH B 28 628 125 HOH HOH . FA 4 HOH B 29 629 69 HOH HOH . FA 4 HOH B 30 630 71 HOH HOH . FA 4 HOH B 31 631 167 HOH HOH . FA 4 HOH B 32 632 75 HOH HOH . FA 4 HOH B 33 633 149 HOH HOH . FA 4 HOH B 34 634 145 HOH HOH . FA 4 HOH B 35 635 70 HOH HOH . FA 4 HOH B 36 636 132 HOH HOH . FA 4 HOH B 37 637 62 HOH HOH . FA 4 HOH B 38 638 45 HOH HOH . FA 4 HOH B 39 639 99 HOH HOH . FA 4 HOH B 40 640 157 HOH HOH . FA 4 HOH B 41 641 136 HOH HOH . FA 4 HOH B 42 642 30 HOH HOH . FA 4 HOH B 43 643 121 HOH HOH . FA 4 HOH B 44 644 52 HOH HOH . FA 4 HOH B 45 645 141 HOH HOH . FA 4 HOH B 46 646 66 HOH HOH . FA 4 HOH B 47 647 48 HOH HOH . FA 4 HOH B 48 648 187 HOH HOH . FA 4 HOH B 49 649 56 HOH HOH . FA 4 HOH B 50 650 130 HOH HOH . FA 4 HOH B 51 651 184 HOH HOH . FA 4 HOH B 52 652 33 HOH HOH . FA 4 HOH B 53 653 104 HOH HOH . FA 4 HOH B 54 654 93 HOH HOH . FA 4 HOH B 55 655 54 HOH HOH . FA 4 HOH B 56 656 171 HOH HOH . FA 4 HOH B 57 657 150 HOH HOH . FA 4 HOH B 58 658 116 HOH HOH . FA 4 HOH B 59 659 55 HOH HOH . FA 4 HOH B 60 660 25 HOH HOH . FA 4 HOH B 61 661 192 HOH HOH . FA 4 HOH B 62 662 82 HOH HOH . FA 4 HOH B 63 663 135 HOH HOH . FA 4 HOH B 64 664 122 HOH HOH . FA 4 HOH B 65 665 36 HOH HOH . FA 4 HOH B 66 666 20 HOH HOH . FA 4 HOH B 67 667 169 HOH HOH . FA 4 HOH B 68 668 175 HOH HOH . FA 4 HOH B 69 669 16 HOH HOH . FA 4 HOH B 70 670 81 HOH HOH . FA 4 HOH B 71 671 91 HOH HOH . FA 4 HOH B 72 672 5 HOH HOH . FA 4 HOH B 73 673 13 HOH HOH . FA 4 HOH B 74 674 12 HOH HOH . FA 4 HOH B 75 675 88 HOH HOH . FA 4 HOH B 76 676 134 HOH HOH . FA 4 HOH B 77 677 8 HOH HOH . FA 4 HOH B 78 678 182 HOH HOH . FA 4 HOH B 79 679 183 HOH HOH . FA 4 HOH B 80 680 26 HOH HOH . FA 4 HOH B 81 681 49 HOH HOH . FA 4 HOH B 82 682 67 HOH HOH . FA 4 HOH B 83 683 179 HOH HOH . FA 4 HOH B 84 684 168 HOH HOH . FA 4 HOH B 85 685 50 HOH HOH . FA 4 HOH B 86 686 143 HOH HOH . FA 4 HOH B 87 687 108 HOH HOH . FA 4 HOH B 88 688 74 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S DMS . . . T 2 43.015 -10.586 13.596 1 60.35 ? S DMS 504 B 1 HETATM 2 O O DMS . . . T 2 41.651 -11.231 13.794 1 47.45 ? O DMS 504 B 1 HETATM 3 C C1 DMS . . . T 2 44.003 -11.82 12.782 1 62 ? C1 DMS 504 B 1 HETATM 4 C C2 DMS . . . T 2 43.828 -10.611 15.173 1 60.65 ? C2 DMS 504 B 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 32 _model_server_stats.create_model_time_ms 13 _model_server_stats.query_time_ms 292 _model_server_stats.encode_time_ms 14 _model_server_stats.element_count 4 #