data_8CNH
#
_model_server_result.job_id            4vL5ZnTbBQLp62Tot8PQvQ 
_model_server_result.datetime_utc      '2024-11-28 14:21:38' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8cnh 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":504}' 
#
_entry.id    8CNH 
#
_exptl.entry_id    8CNH 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              78.133 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'DIMETHYL SULFOXIDE' 
_entity.pdbx_number_of_molecules    5 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            8CNH 
_cell.length_a            99.14 
_cell.length_b            99.14 
_cell.length_c            99.601 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8CNH 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        173 
_symmetry.space_group_name_Hall    'P 6c' 
_symmetry.space_group_name_H-M     'P 63' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 C N N 
? 3 D N N 
? 3 E N N 
? 3 G N N 
? 3 M N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C ALA 252 A ALA 252 1_555 A N CME 253 A CME 253 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
covale ? covale2 A C CME 253 A CME 253 1_555 A N THR 254 A THR 254 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? 
#
_chem_comp.formula           'C2 H6 O S' 
_chem_comp.formula_weight    78.133 
_chem_comp.id                DMS 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'DIMETHYL SULFOXIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
S O DMS doub 110 n n 
S C1 DMS sing 111 n n 
S C2 DMS sing 112 n n 
C1 H11 DMS sing 113 n n 
C1 H12 DMS sing 114 n n 
C1 H13 DMS sing 115 n n 
C2 H21 DMS sing 116 n n 
C2 H22 DMS sing 117 n n 
C2 H23 DMS sing 118 n n 
#
_atom_sites.entry_id                     8CNH 
_atom_sites.fract_transf_matrix[1][1]    0.010087 
_atom_sites.fract_transf_matrix[1][2]    0.005824 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011647 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.01004 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 V6U A 1 501 501 V6U 105 . 
C 3 DMS A 1 502 601 DMS DMS . 
D 3 DMS A 1 503 701 DMS DMS . 
E 3 DMS A 1 504 801 DMS DMS . 
F 4 EDO A 1 505 901 EDO EDO . 
G 3 DMS A 1 506 1001 DMS DMS . 
H 4 EDO A 1 507 1101 EDO EDO . 
I 4 EDO A 1 508 1201 EDO EDO . 
J 4 EDO A 1 509 1301 EDO EDO . 
K 4 EDO A 1 510 1401 EDO EDO . 
L 4 EDO A 1 511 1501 EDO EDO . 
M 3 DMS A 1 512 1601 DMS DMS . 
N 5 ACT A 1 513 1801 ACT ACT . 
O 4 EDO A 1 514 1901 EDO EDO . 
P 4 EDO A 1 515 2001 EDO EDO . 
Q 4 EDO A 1 516 2101 EDO EDO . 
R 6 HOH A 1 601 104 HOH HOH . 
R 6 HOH A 2 602 121 HOH HOH . 
R 6 HOH A 3 603 109 HOH HOH . 
R 6 HOH A 4 604 110 HOH HOH . 
R 6 HOH A 5 605 126 HOH HOH . 
R 6 HOH A 6 606 93 HOH HOH . 
R 6 HOH A 7 607 135 HOH HOH . 
R 6 HOH A 8 608 113 HOH HOH . 
R 6 HOH A 9 609 69 HOH HOH . 
R 6 HOH A 10 610 72 HOH HOH . 
R 6 HOH A 11 611 8 HOH HOH . 
R 6 HOH A 12 612 139 HOH HOH . 
R 6 HOH A 13 613 16 HOH HOH . 
R 6 HOH A 14 614 120 HOH HOH . 
R 6 HOH A 15 615 59 HOH HOH . 
R 6 HOH A 16 616 127 HOH HOH . 
R 6 HOH A 17 617 106 HOH HOH . 
R 6 HOH A 18 618 56 HOH HOH . 
R 6 HOH A 19 619 75 HOH HOH . 
R 6 HOH A 20 620 39 HOH HOH . 
R 6 HOH A 21 621 60 HOH HOH . 
R 6 HOH A 22 622 132 HOH HOH . 
R 6 HOH A 23 623 11 HOH HOH . 
R 6 HOH A 24 624 23 HOH HOH . 
R 6 HOH A 25 625 15 HOH HOH . 
R 6 HOH A 26 626 114 HOH HOH . 
R 6 HOH A 27 627 138 HOH HOH . 
R 6 HOH A 28 628 77 HOH HOH . 
R 6 HOH A 29 629 13 HOH HOH . 
R 6 HOH A 30 630 76 HOH HOH . 
R 6 HOH A 31 631 29 HOH HOH . 
R 6 HOH A 32 632 141 HOH HOH . 
R 6 HOH A 33 633 19 HOH HOH . 
R 6 HOH A 34 634 112 HOH HOH . 
R 6 HOH A 35 635 40 HOH HOH . 
R 6 HOH A 36 636 131 HOH HOH . 
R 6 HOH A 37 637 136 HOH HOH . 
R 6 HOH A 38 638 22 HOH HOH . 
R 6 HOH A 39 639 14 HOH HOH . 
R 6 HOH A 40 640 48 HOH HOH . 
R 6 HOH A 41 641 12 HOH HOH . 
R 6 HOH A 42 642 17 HOH HOH . 
R 6 HOH A 43 643 4 HOH HOH . 
R 6 HOH A 44 644 53 HOH HOH . 
R 6 HOH A 45 645 43 HOH HOH . 
R 6 HOH A 46 646 20 HOH HOH . 
R 6 HOH A 47 647 79 HOH HOH . 
R 6 HOH A 48 648 1 HOH HOH . 
R 6 HOH A 49 649 52 HOH HOH . 
R 6 HOH A 50 650 111 HOH HOH . 
R 6 HOH A 51 651 2 HOH HOH . 
R 6 HOH A 52 652 30 HOH HOH . 
R 6 HOH A 53 653 107 HOH HOH . 
R 6 HOH A 54 654 34 HOH HOH . 
R 6 HOH A 55 655 97 HOH HOH . 
R 6 HOH A 56 656 41 HOH HOH . 
R 6 HOH A 57 657 134 HOH HOH . 
R 6 HOH A 58 658 88 HOH HOH . 
R 6 HOH A 59 659 116 HOH HOH . 
R 6 HOH A 60 660 36 HOH HOH . 
R 6 HOH A 61 661 74 HOH HOH . 
R 6 HOH A 62 662 3 HOH HOH . 
R 6 HOH A 63 663 7 HOH HOH . 
R 6 HOH A 64 664 49 HOH HOH . 
R 6 HOH A 65 665 98 HOH HOH . 
R 6 HOH A 66 666 119 HOH HOH . 
R 6 HOH A 67 667 32 HOH HOH . 
R 6 HOH A 68 668 35 HOH HOH . 
R 6 HOH A 69 669 31 HOH HOH . 
R 6 HOH A 70 670 96 HOH HOH . 
R 6 HOH A 71 671 92 HOH HOH . 
R 6 HOH A 72 672 91 HOH HOH . 
R 6 HOH A 73 673 63 HOH HOH . 
R 6 HOH A 74 674 54 HOH HOH . 
R 6 HOH A 75 675 71 HOH HOH . 
R 6 HOH A 76 676 47 HOH HOH . 
R 6 HOH A 77 677 145 HOH HOH . 
R 6 HOH A 78 678 44 HOH HOH . 
R 6 HOH A 79 679 38 HOH HOH . 
R 6 HOH A 80 680 5 HOH HOH . 
R 6 HOH A 81 681 21 HOH HOH . 
R 6 HOH A 82 682 50 HOH HOH . 
R 6 HOH A 83 683 57 HOH HOH . 
R 6 HOH A 84 684 27 HOH HOH . 
R 6 HOH A 85 685 37 HOH HOH . 
R 6 HOH A 86 686 125 HOH HOH . 
R 6 HOH A 87 687 10 HOH HOH . 
R 6 HOH A 88 688 140 HOH HOH . 
R 6 HOH A 89 689 129 HOH HOH . 
R 6 HOH A 90 690 9 HOH HOH . 
R 6 HOH A 91 691 80 HOH HOH . 
R 6 HOH A 92 692 6 HOH HOH . 
R 6 HOH A 93 693 45 HOH HOH . 
R 6 HOH A 94 694 66 HOH HOH . 
R 6 HOH A 95 695 42 HOH HOH . 
R 6 HOH A 96 696 89 HOH HOH . 
R 6 HOH A 97 697 144 HOH HOH . 
R 6 HOH A 98 698 137 HOH HOH . 
R 6 HOH A 99 699 128 HOH HOH . 
R 6 HOH A 100 700 55 HOH HOH . 
R 6 HOH A 101 701 82 HOH HOH . 
R 6 HOH A 102 702 62 HOH HOH . 
R 6 HOH A 103 703 101 HOH HOH . 
R 6 HOH A 104 704 124 HOH HOH . 
R 6 HOH A 105 705 86 HOH HOH . 
R 6 HOH A 106 706 115 HOH HOH . 
R 6 HOH A 107 707 142 HOH HOH . 
R 6 HOH A 108 708 105 HOH HOH . 
R 6 HOH A 109 709 94 HOH HOH . 
R 6 HOH A 110 710 133 HOH HOH . 
R 6 HOH A 111 711 73 HOH HOH . 
R 6 HOH A 112 712 51 HOH HOH . 
R 6 HOH A 113 713 143 HOH HOH . 
R 6 HOH A 114 714 95 HOH HOH . 
R 6 HOH A 115 715 130 HOH HOH . 
R 6 HOH A 116 716 123 HOH HOH . 
R 6 HOH A 117 717 117 HOH HOH . 
R 6 HOH A 118 718 103 HOH HOH . 
R 6 HOH A 119 719 81 HOH HOH . 
R 6 HOH A 120 720 118 HOH HOH . 
R 6 HOH A 121 721 78 HOH HOH . 
R 6 HOH A 122 722 102 HOH HOH . 
R 6 HOH A 123 723 25 HOH HOH . 
R 6 HOH A 124 724 90 HOH HOH . 
R 6 HOH A 125 725 58 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 S S DMS . . . E 3 -45.96 15.298 8.987 1 62.28 ? S DMS 504 A 1 
HETATM 2 O O DMS . . . E 3 -45.267 15.668 7.715 1 59.98 ? O DMS 504 A 1 
HETATM 3 C C1 DMS . . . E 3 -47.622 14.711 8.527 1 62.87 ? C1 DMS 504 A 1 
HETATM 4 C C2 DMS . . . E 3 -46.362 16.719 10.046 1 62.83 ? C2 DMS 504 A 1 
HETATM 5 H H11 DMS . . . E 3 -48.142 15.484 8.023 1 75.44 ? H11 DMS 504 A 1 
HETATM 6 H H12 DMS . . . E 3 -48.155 14.439 9.401 1 75.44 ? H12 DMS 504 A 1 
HETATM 7 H H13 DMS . . . E 3 -47.536 13.87 7.889 1 75.44 ? H13 DMS 504 A 1 
HETATM 8 H H21 DMS . . . E 3 -45.484 17.283 10.23 1 75.4 ? H21 DMS 504 A 1 
HETATM 9 H H22 DMS . . . E 3 -46.757 16.374 10.966 1 75.4 ? H22 DMS 504 A 1 
HETATM 10 H H23 DMS . . . E 3 -47.078 17.33 9.562 1 75.4 ? H23 DMS 504 A 1 
#
_model_server_stats.io_time_ms              19 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    12 
_model_server_stats.query_time_ms           265 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           10 
#