data_8COJ # _model_server_result.job_id LEg6D283stuNNnbdWp489A _model_server_result.datetime_utc '2024-11-06 03:02:09' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8coj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":501}' # _entry.id 8COJ # _exptl.entry_id 8COJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 317.749 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 4-chloranyl-6-[4-[(3-fluorophenyl)methyl]-1-methyl-pyrazol-3-yl]pyrimidin-2-amine _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 8COJ _cell.length_a 98.905 _cell.length_b 98.905 _cell.length_c 99.746 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8COJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 173 _symmetry.space_group_name_Hall 'P 6c' _symmetry.space_group_name_H-M 'P 63' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C ALA 252 A ALA 252 1_555 A N CME 253 A CME 253 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale2 A C CME 253 A CME 253 1_555 A N THR 254 A THR 254 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.32 ? # _chem_comp.formula 'C15 H13 Cl F N5' _chem_comp.formula_weight 317.749 _chem_comp.id VE1 _chem_comp.mon_nstd_flag . _chem_comp.name 4-chloranyl-6-[4-[(3-fluorophenyl)methyl]-1-methyl-pyrazol-3-yl]pyrimidin-2-amine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C14 C15 VE1 doub 421 n y C14 C13 VE1 sing 422 n y C15 C16 VE1 sing 423 n y F18 C13 VE1 sing 424 n n C13 C12 VE1 doub 425 n y CL22 C05 VE1 sing 426 n n C16 C17 VE1 doub 427 n y C05 C04 VE1 doub 428 n y C05 N06 VE1 sing 429 n y C20 N07 VE1 sing 430 n n C04 C03 VE1 sing 431 n y N11 N07 VE1 sing 432 n y N11 C10 VE1 doub 433 n y N06 C01 VE1 doub 434 n y N07 C08 VE1 sing 435 n y C12 C17 VE1 sing 436 n y C03 C10 VE1 sing 437 n n C03 N02 VE1 doub 438 n y C17 C19 VE1 sing 439 n n C10 C09 VE1 sing 440 n y C01 N02 VE1 sing 441 n y C01 N21 VE1 sing 442 n n C08 C09 VE1 doub 443 n y C09 C19 VE1 sing 444 n n C04 H041 VE1 sing 445 n n C08 H081 VE1 sing 446 n n C12 H121 VE1 sing 447 n n C14 H141 VE1 sing 448 n n C15 H151 VE1 sing 449 n n C16 H161 VE1 sing 450 n n C19 H191 VE1 sing 451 n n C19 H192 VE1 sing 452 n n C20 H201 VE1 sing 453 n n C20 H202 VE1 sing 454 n n C20 H203 VE1 sing 455 n n N21 H211 VE1 sing 456 n n N21 H212 VE1 sing 457 n n # _atom_sites.entry_id 8COJ _atom_sites.fract_transf_matrix[1][1] 0.010111 _atom_sites.fract_transf_matrix[1][2] 0.005837 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011675 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010025 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 VE1 A 1 501 501 VE1 102 . C 3 DMS A 1 502 601 DMS DMS . D 3 DMS A 1 503 701 DMS DMS . E 3 DMS A 1 504 801 DMS DMS . F 3 DMS A 1 505 901 DMS DMS . G 4 ACT A 1 506 1001 ACT ACT . H 5 EDO A 1 507 1101 EDO EDO . I 5 EDO A 1 508 1201 EDO EDO . J 5 EDO A 1 509 1301 EDO EDO . K 5 EDO A 1 510 1401 EDO EDO . L 5 EDO A 1 511 1501 EDO EDO . M 5 EDO A 1 512 1601 EDO EDO . N 6 HOH A 1 601 7 HOH HOH . N 6 HOH A 2 602 38 HOH HOH . N 6 HOH A 3 603 36 HOH HOH . N 6 HOH A 4 604 124 HOH HOH . N 6 HOH A 5 605 58 HOH HOH . N 6 HOH A 6 606 5 HOH HOH . N 6 HOH A 7 607 33 HOH HOH . N 6 HOH A 8 608 31 HOH HOH . N 6 HOH A 9 609 20 HOH HOH . N 6 HOH A 10 610 89 HOH HOH . N 6 HOH A 11 611 63 HOH HOH . N 6 HOH A 12 612 6 HOH HOH . N 6 HOH A 13 613 66 HOH HOH . N 6 HOH A 14 614 4 HOH HOH . N 6 HOH A 15 615 86 HOH HOH . N 6 HOH A 16 616 2 HOH HOH . N 6 HOH A 17 617 75 HOH HOH . N 6 HOH A 18 618 37 HOH HOH . N 6 HOH A 19 619 19 HOH HOH . N 6 HOH A 20 620 125 HOH HOH . N 6 HOH A 21 621 107 HOH HOH . N 6 HOH A 22 622 22 HOH HOH . N 6 HOH A 23 623 3 HOH HOH . N 6 HOH A 24 624 35 HOH HOH . N 6 HOH A 25 625 23 HOH HOH . N 6 HOH A 26 626 57 HOH HOH . N 6 HOH A 27 627 65 HOH HOH . N 6 HOH A 28 628 73 HOH HOH . N 6 HOH A 29 629 1 HOH HOH . N 6 HOH A 30 630 32 HOH HOH . N 6 HOH A 31 631 56 HOH HOH . N 6 HOH A 32 632 80 HOH HOH . N 6 HOH A 33 633 8 HOH HOH . N 6 HOH A 34 634 90 HOH HOH . N 6 HOH A 35 635 41 HOH HOH . N 6 HOH A 36 636 48 HOH HOH . N 6 HOH A 37 637 9 HOH HOH . N 6 HOH A 38 638 12 HOH HOH . N 6 HOH A 39 639 13 HOH HOH . N 6 HOH A 40 640 96 HOH HOH . N 6 HOH A 41 641 71 HOH HOH . N 6 HOH A 42 642 84 HOH HOH . N 6 HOH A 43 643 60 HOH HOH . N 6 HOH A 44 644 59 HOH HOH . N 6 HOH A 45 645 18 HOH HOH . N 6 HOH A 46 646 94 HOH HOH . N 6 HOH A 47 647 43 HOH HOH . N 6 HOH A 48 648 130 HOH HOH . N 6 HOH A 49 649 29 HOH HOH . N 6 HOH A 50 650 122 HOH HOH . N 6 HOH A 51 651 70 HOH HOH . N 6 HOH A 52 652 85 HOH HOH . N 6 HOH A 53 653 49 HOH HOH . N 6 HOH A 54 654 52 HOH HOH . N 6 HOH A 55 655 53 HOH HOH . N 6 HOH A 56 656 95 HOH HOH . N 6 HOH A 57 657 103 HOH HOH . N 6 HOH A 58 658 61 HOH HOH . N 6 HOH A 59 659 25 HOH HOH . N 6 HOH A 60 660 17 HOH HOH . N 6 HOH A 61 661 74 HOH HOH . N 6 HOH A 62 662 21 HOH HOH . N 6 HOH A 63 663 62 HOH HOH . N 6 HOH A 64 664 44 HOH HOH . N 6 HOH A 65 665 46 HOH HOH . N 6 HOH A 66 666 24 HOH HOH . N 6 HOH A 67 667 45 HOH HOH . N 6 HOH A 68 668 30 HOH HOH . N 6 HOH A 69 669 11 HOH HOH . N 6 HOH A 70 670 16 HOH HOH . N 6 HOH A 71 671 102 HOH HOH . N 6 HOH A 72 672 115 HOH HOH . N 6 HOH A 73 673 72 HOH HOH . N 6 HOH A 74 674 133 HOH HOH . N 6 HOH A 75 675 26 HOH HOH . N 6 HOH A 76 676 105 HOH HOH . N 6 HOH A 77 677 14 HOH HOH . N 6 HOH A 78 678 97 HOH HOH . N 6 HOH A 79 679 50 HOH HOH . N 6 HOH A 80 680 93 HOH HOH . N 6 HOH A 81 681 110 HOH HOH . N 6 HOH A 82 682 67 HOH HOH . N 6 HOH A 83 683 136 HOH HOH . N 6 HOH A 84 684 34 HOH HOH . N 6 HOH A 85 685 15 HOH HOH . N 6 HOH A 86 686 99 HOH HOH . N 6 HOH A 87 687 126 HOH HOH . N 6 HOH A 88 688 91 HOH HOH . N 6 HOH A 89 689 123 HOH HOH . N 6 HOH A 90 690 138 HOH HOH . N 6 HOH A 91 691 132 HOH HOH . N 6 HOH A 92 692 68 HOH HOH . N 6 HOH A 93 693 127 HOH HOH . N 6 HOH A 94 694 109 HOH HOH . N 6 HOH A 95 695 108 HOH HOH . N 6 HOH A 96 696 88 HOH HOH . N 6 HOH A 97 697 79 HOH HOH . N 6 HOH A 98 698 77 HOH HOH . N 6 HOH A 99 699 137 HOH HOH . N 6 HOH A 100 700 113 HOH HOH . N 6 HOH A 101 701 117 HOH HOH . N 6 HOH A 102 702 40 HOH HOH . N 6 HOH A 103 703 119 HOH HOH . N 6 HOH A 104 704 135 HOH HOH . N 6 HOH A 105 705 42 HOH HOH . N 6 HOH A 106 706 51 HOH HOH . N 6 HOH A 107 707 131 HOH HOH . N 6 HOH A 108 708 120 HOH HOH . N 6 HOH A 109 709 116 HOH HOH . N 6 HOH A 110 710 121 HOH HOH . N 6 HOH A 111 711 47 HOH HOH . N 6 HOH A 112 712 134 HOH HOH . N 6 HOH A 113 713 112 HOH HOH . N 6 HOH A 114 714 92 HOH HOH . N 6 HOH A 115 715 128 HOH HOH . N 6 HOH A 116 716 83 HOH HOH . N 6 HOH A 117 717 114 HOH HOH . N 6 HOH A 118 718 64 HOH HOH . N 6 HOH A 119 719 129 HOH HOH . N 6 HOH A 120 720 118 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C01 VE1 . . . B 2 9.558 24.262 -1.596 1 34.37 ? C01 VE1 501 A 1 HETATM 2 C C03 VE1 . . . B 2 10.527 26.599 -1.838 1 31.96 ? C03 VE1 501 A 1 HETATM 3 C C04 VE1 . . . B 2 9.223 27.098 -2.326 1 33.4 ? C04 VE1 501 A 1 HETATM 4 C C05 VE1 . . . B 2 8.131 26.119 -2.414 1 35.55 ? C05 VE1 501 A 1 HETATM 5 C C08 VE1 . . . B 2 13.653 28.504 -1.44 1 36.7 ? C08 VE1 501 A 1 HETATM 6 C C09 VE1 . . . B 2 12.946 27.35 -1.287 1 37.52 ? C09 VE1 501 A 1 HETATM 7 C C10 VE1 . . . B 2 11.683 27.577 -1.757 1 35.45 ? C10 VE1 501 A 1 HETATM 8 C C12 VE1 . . . B 2 15.682 25.372 -1.915 1 47.48 ? C12 VE1 501 A 1 HETATM 9 C C13 VE1 . . . B 2 16.402 24.589 -3.005 1 51.47 ? C13 VE1 501 A 1 HETATM 10 C C14 VE1 . . . B 2 15.609 23.735 -3.977 1 46.23 ? C14 VE1 501 A 1 HETATM 11 C C15 VE1 . . . B 2 14.101 23.649 -3.836 1 43.05 ? C15 VE1 501 A 1 HETATM 12 C C16 VE1 . . . B 2 13.374 24.405 -2.732 1 41.14 ? C16 VE1 501 A 1 HETATM 13 C C17 VE1 . . . B 2 14.172 25.268 -1.776 1 42.09 ? C17 VE1 501 A 1 HETATM 14 C C19 VE1 . . . B 2 13.442 26.038 -0.692 1 38.62 ? C19 VE1 501 A 1 HETATM 15 C C20 VE1 . . . B 2 13.19 30.787 -2.358 1 39.34 ? C20 VE1 501 A 1 HETATM 16 F F18 VE1 . . . B 2 17.761 24.669 -3.103 1 58.96 ? F18 VE1 501 A 1 HETATM 17 N N02 VE1 . . . B 2 10.677 25.206 -1.493 1 30.31 ? N02 VE1 501 A 1 HETATM 18 N N06 VE1 . . . B 2 8.264 24.732 -2.065 1 34.59 ? N06 VE1 501 A 1 HETATM 19 N N07 VE1 . . . B 2 12.843 29.42 -1.997 1 37.21 ? N07 VE1 501 A 1 HETATM 20 N N11 VE1 . . . B 2 11.612 28.827 -2.197 1 36.5 ? N11 VE1 501 A 1 HETATM 21 N N21 VE1 . . . B 2 9.714 22.872 -1.252 1 38.45 ? N21 VE1 501 A 1 HETATM 22 CL CL22 VE1 . . . B 2 6.593 26.683 -2.983 1 35.35 ? CL22 VE1 501 A 1 HETATM 23 H H041 VE1 . . . B 2 9.101 27.988 -2.566 1 40.1 ? H041 VE1 501 A 1 HETATM 24 H H081 VE1 . . . B 2 14.542 28.635 -1.2 1 44.07 ? H081 VE1 501 A 1 HETATM 25 H H121 VE1 . . . B 2 16.166 25.914 -1.334 1 57 ? H121 VE1 501 A 1 HETATM 26 H H141 VE1 . . . B 2 16.044 23.268 -4.653 1 55.51 ? H141 VE1 501 A 1 HETATM 27 H H151 VE1 . . . B 2 13.613 23.127 -4.433 1 51.68 ? H151 VE1 501 A 1 HETATM 28 H H161 VE1 . . . B 2 12.451 24.338 -2.646 1 49.39 ? H161 VE1 501 A 1 HETATM 29 H H191 VE1 . . . B 2 14.047 26.22 0.044 1 46.37 ? H191 VE1 501 A 1 HETATM 30 H H192 VE1 . . . B 2 12.689 25.518 -0.371 1 46.37 ? H192 VE1 501 A 1 HETATM 31 H H201 VE1 . . . B 2 12.603 31.404 -1.892 1 47.23 ? H201 VE1 501 A 1 HETATM 32 H H202 VE1 . . . B 2 13.089 30.905 -3.315 1 47.23 ? H202 VE1 501 A 1 HETATM 33 H H203 VE1 . . . B 2 14.11 30.964 -2.106 1 47.23 ? H203 VE1 501 A 1 HETATM 34 H H211 VE1 . . . B 2 9.028 22.35 -1.23 1 46.16 ? H211 VE1 501 A 1 HETATM 35 H H212 VE1 . . . B 2 10.494 22.56 -1.051 1 46.16 ? H212 VE1 501 A 1 # _model_server_stats.io_time_ms 22 _model_server_stats.parse_time_ms 16 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 304 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 35 #