data_8COP
#
_model_server_result.job_id            m7xpwcFx6JIoIefGGEQFUA 
_model_server_result.datetime_utc      '2024-11-02 17:27:14' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8cop 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":204}' 
#
_entry.id    8COP 
#
_exptl.entry_id    8COP 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              343.403 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            ~{N}-[4-[2,6-bis(azanyl)-5-(2-cyclopropylethynyl)pyrimidin-4-yl]phenyl]methanesulfonamide 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8COP 
_cell.length_a            61.029 
_cell.length_b            71.927 
_cell.length_c            72.375 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8COP 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 F N N 
? 4 J N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A NE2 HIS 40 A HIS 38 1_555 G CO CO . A CO 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.984 ? 
metalc ? metalc2 A NE2 HIS 159 A HIS 157 1_555 K CO CO . B CO 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.787 ? 
metalc ? metalc3 G CO CO . A CO 205 1_555 L O HOH . A HOH 308 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.937 ? 
metalc ? metalc4 G CO CO . A CO 205 1_555 L O HOH . A HOH 321 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.366 ? 
metalc ? metalc5 G CO CO . A CO 205 1_555 B NE2 HIS 159 B HIS 157 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.998 ? 
metalc ? metalc6 B NE2 HIS 40 B HIS 38 1_555 K CO CO . B CO 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.051 ? 
metalc ? metalc7 K CO CO . B CO 204 1_555 M O HOH . B HOH 307 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.172 ? 
metalc ? metalc8 K CO CO . B CO 204 1_555 M O HOH . B HOH 317 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.858 ? 
#
_chem_comp.formula           'C16 H17 N5 O2 S' 
_chem_comp.formula_weight    343.403 
_chem_comp.id                VCI 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              ~{N}-[4-[2,6-bis(azanyl)-5-(2-cyclopropylethynyl)pyrimidin-4-yl]phenyl]methanesulfonamide 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N03 C04 VCI sing 462 n n 
C04 N01 VCI doub 463 n y 
C04 C03 VCI sing 464 n y 
N01 C01 VCI sing 465 n y 
C08 C06 VCI sing 466 n n 
C08 C16 VCI sing 467 n n 
C08 C15 VCI sing 468 n n 
C06 C05 VCI trip 469 n n 
C05 C03 VCI sing 470 n n 
C03 C02 VCI doub 471 n y 
C01 N04 VCI sing 472 n n 
C01 N02 VCI doub 473 n y 
C16 C15 VCI sing 474 n n 
N02 C02 VCI sing 475 n y 
C02 C07 VCI sing 476 n n 
C07 C09 VCI doub 477 n y 
C07 C13 VCI sing 478 n y 
C09 C10 VCI sing 479 n y 
C13 C12 VCI doub 480 n y 
C10 C11 VCI doub 481 n y 
C12 C11 VCI sing 482 n y 
C11 N05 VCI sing 483 n n 
N05 S01 VCI sing 484 n n 
O01 S01 VCI doub 485 n n 
S01 O02 VCI doub 486 n n 
S01 C14 VCI sing 487 n n 
C10 H1 VCI sing 488 n n 
C16 H2 VCI sing 489 n n 
C16 H3 VCI sing 490 n n 
C08 H4 VCI sing 491 n n 
C09 H5 VCI sing 492 n n 
C12 H6 VCI sing 493 n n 
C13 H7 VCI sing 494 n n 
C14 H8 VCI sing 495 n n 
C14 H9 VCI sing 496 n n 
C14 H10 VCI sing 497 n n 
C15 H11 VCI sing 498 n n 
C15 H12 VCI sing 499 n n 
N03 H13 VCI sing 500 n n 
N03 H14 VCI sing 501 n n 
N04 H15 VCI sing 502 n n 
N04 H16 VCI sing 503 n n 
N05 H17 VCI sing 504 n n 
#
_atom_sites.entry_id                     8COP 
_atom_sites.fract_transf_matrix[1][1]    0.016386 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.013903 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.013817 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 NDP A 1 201 204 NDP NDP . 
D 3 PO4 A 1 202 205 PO4 PO4 . 
E 3 PO4 A 1 203 206 PO4 PO4 . 
F 4 VCI A 1 204 301 VCI S29 . 
G 5 CO A 1 205 1 CO CO . 
H 2 NDP B 1 201 204 NDP NDP . 
I 3 PO4 B 1 202 205 PO4 PO4 . 
J 4 VCI B 1 203 301 VCI S29 . 
K 5 CO B 1 204 2 CO CO . 
L 6 HOH A 1 301 6 HOH HOH . 
L 6 HOH A 2 302 4 HOH HOH . 
L 6 HOH A 3 303 2 HOH HOH . 
L 6 HOH A 4 304 40 HOH HOH . 
L 6 HOH A 5 305 34 HOH HOH . 
L 6 HOH A 6 306 24 HOH HOH . 
L 6 HOH A 7 307 19 HOH HOH . 
L 6 HOH A 8 308 8 HOH HOH . 
L 6 HOH A 9 309 9 HOH HOH . 
L 6 HOH A 10 310 31 HOH HOH . 
L 6 HOH A 11 311 43 HOH HOH . 
L 6 HOH A 12 312 12 HOH HOH . 
L 6 HOH A 13 313 3 HOH HOH . 
L 6 HOH A 14 314 16 HOH HOH . 
L 6 HOH A 15 315 20 HOH HOH . 
L 6 HOH A 16 316 48 HOH HOH . 
L 6 HOH A 17 317 13 HOH HOH . 
L 6 HOH A 18 318 1 HOH HOH . 
L 6 HOH A 19 319 26 HOH HOH . 
L 6 HOH A 20 320 49 HOH HOH . 
L 6 HOH A 21 321 39 HOH HOH . 
L 6 HOH A 22 322 44 HOH HOH . 
L 6 HOH A 23 323 45 HOH HOH . 
L 6 HOH A 24 324 46 HOH HOH . 
M 6 HOH B 1 301 5 HOH HOH . 
M 6 HOH B 2 302 51 HOH HOH . 
M 6 HOH B 3 303 17 HOH HOH . 
M 6 HOH B 4 304 37 HOH HOH . 
M 6 HOH B 5 305 30 HOH HOH . 
M 6 HOH B 6 306 55 HOH HOH . 
M 6 HOH B 7 307 28 HOH HOH . 
M 6 HOH B 8 308 27 HOH HOH . 
M 6 HOH B 9 309 54 HOH HOH . 
M 6 HOH B 10 310 14 HOH HOH . 
M 6 HOH B 11 311 35 HOH HOH . 
M 6 HOH B 12 312 23 HOH HOH . 
M 6 HOH B 13 313 50 HOH HOH . 
M 6 HOH B 14 314 41 HOH HOH . 
M 6 HOH B 15 315 11 HOH HOH . 
M 6 HOH B 16 316 33 HOH HOH . 
M 6 HOH B 17 317 18 HOH HOH . 
M 6 HOH B 18 318 10 HOH HOH . 
M 6 HOH B 19 319 52 HOH HOH . 
M 6 HOH B 20 320 22 HOH HOH . 
M 6 HOH B 21 321 21 HOH HOH . 
M 6 HOH B 22 322 36 HOH HOH . 
M 6 HOH B 23 323 7 HOH HOH . 
M 6 HOH B 24 324 25 HOH HOH . 
M 6 HOH B 25 325 38 HOH HOH . 
M 6 HOH B 26 326 15 HOH HOH . 
M 6 HOH B 27 327 42 HOH HOH . 
M 6 HOH B 28 328 29 HOH HOH . 
M 6 HOH B 29 329 53 HOH HOH . 
M 6 HOH B 30 330 56 HOH HOH . 
M 6 HOH B 31 331 47 HOH HOH . 
M 6 HOH B 32 332 32 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C10 VCI . . . F 4 7.843 5.894 29.972 1 37.8 ? C10 VCI 204 A 1 
HETATM 2 C C11 VCI . . . F 4 8.714 6.134 31.002 1 39.56 ? C11 VCI 204 A 1 
HETATM 3 C C16 VCI . . . F 4 7.521 9.351 26.342 1 32.32 ? C16 VCI 204 A 1 
HETATM 4 C C01 VCI . . . F 4 11.34 2.469 26.267 1 28.34 ? C01 VCI 204 A 1 
HETATM 5 C C02 VCI . . . F 4 10.134 4.291 27.371 1 33.58 ? C02 VCI 204 A 1 
HETATM 6 C C03 VCI . . . F 4 9.758 4.769 26.115 1 27.82 ? C03 VCI 204 A 1 
HETATM 7 C C04 VCI . . . F 4 10.241 4.046 25.047 1 27.34 ? C04 VCI 204 A 1 
HETATM 8 C C05 VCI . . . F 4 8.904 6.007 25.873 1 28.63 ? C05 VCI 204 A 1 
HETATM 9 C C06 VCI . . . F 4 8.247 6.977 25.65 1 30.94 ? C06 VCI 204 A 1 
HETATM 10 C C07 VCI . . . F 4 9.67 4.962 28.678 1 34.8 ? C07 VCI 204 A 1 
HETATM 11 C C08 VCI . . . F 4 7.381 8.205 25.344 1 27.79 ? C08 VCI 204 A 1 
HETATM 12 C C09 VCI . . . F 4 8.314 5.301 28.81 1 37.72 ? C09 VCI 204 A 1 
HETATM 13 C C12 VCI . . . F 4 10.049 5.799 30.907 1 38.34 ? C12 VCI 204 A 1 
HETATM 14 C C13 VCI . . . F 4 10.54 5.208 29.747 1 33.6 ? C13 VCI 204 A 1 
HETATM 15 C C14 VCI . . . F 4 8.142 8.895 34.131 1 50.19 ? C14 VCI 204 A 1 
HETATM 16 C C15 VCI . . . F 4 6.275 8.461 26.358 1 31.05 ? C15 VCI 204 A 1 
HETATM 17 N N01 VCI . . . F 4 10.983 2.96 25.072 1 28.09 ? N01 VCI 204 A 1 
HETATM 18 N N02 VCI . . . F 4 10.885 3.165 27.332 1 29.98 ? N02 VCI 204 A 1 
HETATM 19 N N03 VCI . . . F 4 9.857 4.557 23.745 1 27.26 ? N03 VCI 204 A 1 
HETATM 20 N N04 VCI . . . F 4 12.166 1.266 26.403 1 26.22 ? N04 VCI 204 A 1 
HETATM 21 N N05 VCI . . . F 4 8.171 6.741 32.204 1 44.15 ? N05 VCI 204 A 1 
HETATM 22 O O01 VCI . . . F 4 10.111 8.469 32.332 1 52.43 ? O01 VCI 204 A 1 
HETATM 23 O O02 VCI . . . F 4 10.024 6.897 34.033 1 46.67 ? O02 VCI 204 A 1 
HETATM 24 S S01 VCI . . . F 4 9.16 7.721 33.178 1 48.03 ? S01 VCI 204 A 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           13 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           241 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           24 
#