data_8CP5
#
_model_server_result.job_id            QJr66qbgRd0HyG7l7Qw2HQ 
_model_server_result.datetime_utc      '2024-11-05 19:55:22' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8cp5 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"H","auth_seq_id":706}' 
#
_entry.id    8CP5 
#
_exptl.entry_id    8CP5 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              743.405 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            8CP5 
_cell.length_a            243.681 
_cell.length_b            243.681 
_cell.length_c            126.298 
_cell.Z_PDB               18 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8CP5 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        146 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'H 3' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,E,F,G,H,I,J,K,L,M,N,O,V 1 1 
B,P,Q,R,S,T,U,W 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 5 H N N 
? 5 R N N 
#
_chem_comp.formula           'C21 H28 N7 O17 P3' 
_chem_comp.formula_weight    743.405 
_chem_comp.id                NAP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     "2'-MONOPHOSPHOADENOSINE 5'-DIPHOSPHORIBOSE" 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PA O1A NAP doub 341 n n 
PA O2A NAP sing 342 n n 
PA O5B NAP sing 343 n n 
PA O3 NAP sing 344 n n 
O2A HOA2 NAP sing 345 n n 
O5B C5B NAP sing 346 n n 
C5B C4B NAP sing 347 n n 
C5B H51A NAP sing 348 n n 
C5B H52A NAP sing 349 n n 
C4B O4B NAP sing 350 n n 
C4B C3B NAP sing 351 n n 
C4B H4B NAP sing 352 n n 
O4B C1B NAP sing 353 n n 
C3B O3B NAP sing 354 n n 
C3B C2B NAP sing 355 n n 
C3B H3B NAP sing 356 n n 
O3B HO3A NAP sing 357 n n 
C2B O2B NAP sing 358 n n 
C2B C1B NAP sing 359 n n 
C2B H2B NAP sing 360 n n 
O2B P2B NAP sing 361 n n 
C1B N9A NAP sing 362 n n 
C1B H1B NAP sing 363 n n 
N9A C8A NAP sing 364 n y 
N9A C4A NAP sing 365 n y 
C8A N7A NAP doub 366 n y 
C8A H8A NAP sing 367 n n 
N7A C5A NAP sing 368 n y 
C5A C6A NAP sing 369 n y 
C5A C4A NAP doub 370 n y 
C6A N6A NAP sing 371 n n 
C6A N1A NAP doub 372 n y 
N6A H61A NAP sing 373 n n 
N6A H62A NAP sing 374 n n 
N1A C2A NAP sing 375 n y 
C2A N3A NAP doub 376 n y 
C2A H2A NAP sing 377 n n 
N3A C4A NAP sing 378 n y 
O3 PN NAP sing 379 n n 
PN O1N NAP doub 380 n n 
PN O2N NAP sing 381 n n 
PN O5D NAP sing 382 n n 
O5D C5D NAP sing 383 n n 
C5D C4D NAP sing 384 n n 
C5D H51N NAP sing 385 n n 
C5D H52N NAP sing 386 n n 
C4D O4D NAP sing 387 n n 
C4D C3D NAP sing 388 n n 
C4D H4D NAP sing 389 n n 
O4D C1D NAP sing 390 n n 
C3D O3D NAP sing 391 n n 
C3D C2D NAP sing 392 n n 
C3D H3D NAP sing 393 n n 
O3D HO3N NAP sing 394 n n 
C2D O2D NAP sing 395 n n 
C2D C1D NAP sing 396 n n 
C2D H2D NAP sing 397 n n 
O2D HO2N NAP sing 398 n n 
C1D N1N NAP sing 399 n n 
C1D H1D NAP sing 400 n n 
N1N C2N NAP sing 401 n y 
N1N C6N NAP doub 402 n y 
C2N C3N NAP doub 403 n y 
C2N H2N NAP sing 404 n n 
C3N C7N NAP sing 405 n n 
C3N C4N NAP sing 406 n y 
C7N O7N NAP doub 407 n n 
C7N N7N NAP sing 408 n n 
N7N H71N NAP sing 409 n n 
N7N H72N NAP sing 410 n n 
C4N C5N NAP doub 411 n y 
C4N H4N NAP sing 412 n n 
C5N C6N NAP sing 413 n y 
C5N H5N NAP sing 414 n n 
C6N H6N NAP sing 415 n n 
P2B O1X NAP doub 416 n n 
P2B O2X NAP sing 417 n n 
P2B O3X NAP sing 418 n n 
O2X HOP2 NAP sing 419 n n 
O3X HOP3 NAP sing 420 n n 
#
_atom_sites.entry_id                     8CP5 
_atom_sites.fract_transf_matrix[1][1]    0.004104 
_atom_sites.fract_transf_matrix[1][2]    0.002369 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.004739 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007918 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 FAD A 1 701 701 FAD FAD . 
D 3 SO4 A 1 702 901 SO4 SO4 . 
E 3 SO4 A 1 703 904 SO4 SO4 . 
F 3 SO4 A 1 704 905 SO4 SO4 . 
G 4 GOL A 1 705 906 GOL GOL . 
H 5 NAP A 1 706 702 NAP NAP . 
I 6 PEG A 1 707 907 PEG PEG . 
J 6 PEG A 1 708 908 PEG PEG . 
K 3 SO4 A 1 709 7 SO4 SO4 . 
L 3 SO4 A 1 710 8 SO4 SO4 . 
M 3 SO4 A 1 711 9 SO4 SO4 . 
N 3 SO4 A 1 712 10 SO4 SO4 . 
O 3 SO4 A 1 713 11 SO4 SO4 . 
P 2 FAD B 1 701 701 FAD FAD . 
Q 3 SO4 B 1 702 901 SO4 SO4 . 
R 5 NAP B 1 703 702 NAP NAP . 
S 6 PEG B 1 704 902 PEG PEG . 
T 3 SO4 B 1 705 6 SO4 SO4 . 
U 3 SO4 B 1 706 12 SO4 SO4 . 
V 7 HOH A 1 801 40 HOH HOH . 
V 7 HOH A 2 802 14 HOH HOH . 
V 7 HOH A 3 803 54 HOH HOH . 
V 7 HOH A 4 804 60 HOH HOH . 
V 7 HOH A 5 805 72 HOH HOH . 
V 7 HOH A 6 806 64 HOH HOH . 
V 7 HOH A 7 807 50 HOH HOH . 
V 7 HOH A 8 808 73 HOH HOH . 
V 7 HOH A 9 809 41 HOH HOH . 
V 7 HOH A 10 810 52 HOH HOH . 
V 7 HOH A 11 811 15 HOH HOH . 
V 7 HOH A 12 812 17 HOH HOH . 
V 7 HOH A 13 813 48 HOH HOH . 
V 7 HOH A 14 814 23 HOH HOH . 
V 7 HOH A 15 815 51 HOH HOH . 
V 7 HOH A 16 816 27 HOH HOH . 
V 7 HOH A 17 817 25 HOH HOH . 
V 7 HOH A 18 818 57 HOH HOH . 
V 7 HOH A 19 819 71 HOH HOH . 
V 7 HOH A 20 820 26 HOH HOH . 
V 7 HOH A 21 821 6 HOH HOH . 
V 7 HOH A 22 822 12 HOH HOH . 
V 7 HOH A 23 823 62 HOH HOH . 
V 7 HOH A 24 824 68 HOH HOH . 
V 7 HOH A 25 825 19 HOH HOH . 
V 7 HOH A 26 826 45 HOH HOH . 
V 7 HOH A 27 827 32 HOH HOH . 
V 7 HOH A 28 828 16 HOH HOH . 
V 7 HOH A 29 829 59 HOH HOH . 
V 7 HOH A 30 830 56 HOH HOH . 
V 7 HOH A 31 831 74 HOH HOH . 
V 7 HOH A 32 832 18 HOH HOH . 
V 7 HOH A 33 833 38 HOH HOH . 
V 7 HOH A 34 834 33 HOH HOH . 
V 7 HOH A 35 835 37 HOH HOH . 
V 7 HOH A 36 836 35 HOH HOH . 
V 7 HOH A 37 837 5 HOH HOH . 
V 7 HOH A 38 838 30 HOH HOH . 
V 7 HOH A 39 839 20 HOH HOH . 
V 7 HOH A 40 840 66 HOH HOH . 
V 7 HOH A 41 841 1 HOH HOH . 
V 7 HOH A 42 842 39 HOH HOH . 
V 7 HOH A 43 843 76 HOH HOH . 
V 7 HOH A 44 844 13 HOH HOH . 
W 7 HOH B 1 801 61 HOH HOH . 
W 7 HOH B 2 802 2 HOH HOH . 
W 7 HOH B 3 803 24 HOH HOH . 
W 7 HOH B 4 804 11 HOH HOH . 
W 7 HOH B 5 805 10 HOH HOH . 
W 7 HOH B 6 806 67 HOH HOH . 
W 7 HOH B 7 807 9 HOH HOH . 
W 7 HOH B 8 808 31 HOH HOH . 
W 7 HOH B 9 809 34 HOH HOH . 
W 7 HOH B 10 810 63 HOH HOH . 
W 7 HOH B 11 811 42 HOH HOH . 
W 7 HOH B 12 812 3 HOH HOH . 
W 7 HOH B 13 813 46 HOH HOH . 
W 7 HOH B 14 814 58 HOH HOH . 
W 7 HOH B 15 815 21 HOH HOH . 
W 7 HOH B 16 816 7 HOH HOH . 
W 7 HOH B 17 817 75 HOH HOH . 
W 7 HOH B 18 818 70 HOH HOH . 
W 7 HOH B 19 819 55 HOH HOH . 
W 7 HOH B 20 820 69 HOH HOH . 
W 7 HOH B 21 821 36 HOH HOH . 
W 7 HOH B 22 822 22 HOH HOH . 
W 7 HOH B 23 823 77 HOH HOH . 
W 7 HOH B 24 824 28 HOH HOH . 
W 7 HOH B 25 825 65 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA NAP . . . H 5 56.451 -17.947 -4.641 1 90.64 ? PA NAP 706 A 1 
HETATM 2 O O1A NAP . . . H 5 55.831 -16.619 -4.281 1 70.4 ? O1A NAP 706 A 1 
HETATM 3 O O2A NAP . . . H 5 57.743 -18.366 -4.018 1 61.39 ? O2A NAP 706 A 1 
HETATM 4 O O5B NAP . . . H 5 55.374 -19.154 -4.538 1 97.59 ? O5B NAP 706 A 1 
HETATM 5 C C5B NAP . . . H 5 55.744 -20.494 -4.99 1 79.33 ? C5B NAP 706 A 1 
HETATM 6 C C4B NAP . . . H 5 54.99 -21.544 -4.21 1 73.22 ? C4B NAP 706 A 1 
HETATM 7 O O4B NAP . . . H 5 55.074 -22.789 -4.944 1 85.58 ? O4B NAP 706 A 1 
HETATM 8 C C3B NAP . . . H 5 55.49 -21.881 -2.794 1 63.38 ? C3B NAP 706 A 1 
HETATM 9 O O3B NAP . . . H 5 54.435 -22.178 -1.89 1 52.01 ? O3B NAP 706 A 1 
HETATM 10 C C2B NAP . . . H 5 56.239 -23.191 -2.959 1 72.72 ? C2B NAP 706 A 1 
HETATM 11 O O2B NAP . . . H 5 56.029 -23.654 -1.633 1 69.01 ? O2B NAP 706 A 1 
HETATM 12 C C1B NAP . . . H 5 55.425 -23.841 -4.072 1 86.82 ? C1B NAP 706 A 1 
HETATM 13 N N9A NAP . . . H 5 56.041 -24.859 -4.925 1 104.45 ? N9A NAP 706 A 1 
HETATM 14 C C8A NAP . . . H 5 56.864 -24.633 -6.005 1 103.07 ? C8A NAP 706 A 1 
HETATM 15 N N7A NAP . . . H 5 57.144 -25.718 -6.686 1 99.73 ? N7A NAP 706 A 1 
HETATM 16 C C5A NAP . . . H 5 56.429 -26.718 -6.039 1 107.86 ? C5A NAP 706 A 1 
HETATM 17 C C6A NAP . . . H 5 56.303 -28.1 -6.286 1 102.33 ? C6A NAP 706 A 1 
HETATM 18 N N6A NAP . . . H 5 56.868 -28.708 -7.328 1 87.63 ? N6A NAP 706 A 1 
HETATM 19 N N1A NAP . . . H 5 55.497 -28.817 -5.453 1 108.84 ? N1A NAP 706 A 1 
HETATM 20 C C2A NAP . . . H 5 54.898 -28.189 -4.427 1 94.19 ? C2A NAP 706 A 1 
HETATM 21 N N3A NAP . . . H 5 54.941 -26.897 -4.106 1 95.85 ? N3A NAP 706 A 1 
HETATM 22 C C4A NAP . . . H 5 55.731 -26.204 -4.957 1 107.39 ? C4A NAP 706 A 1 
HETATM 23 O O3 NAP . . . H 5 56.669 -17.989 -6.217 1 85.89 ? O3 NAP 706 A 1 
HETATM 24 P PN NAP . . . H 5 55.693 -17.39 -7.317 1 92.46 ? PN NAP 706 A 1 
HETATM 25 O O1N NAP . . . H 5 54.297 -17.443 -6.745 1 79.73 ? O1N NAP 706 A 1 
HETATM 26 O O2N NAP . . . H 5 56.015 -18.106 -8.589 1 88.85 ? O2N NAP 706 A 1 
HETATM 27 O O5D NAP . . . H 5 56.268 -15.869 -7.395 1 91.43 ? O5D NAP 706 A 1 
HETATM 28 C C5D NAP . . . H 5 57.668 -15.655 -7.832 1 93.18 ? C5D NAP 706 A 1 
HETATM 29 C C4D NAP . . . H 5 58.07 -14.193 -7.805 1 85.85 ? C4D NAP 706 A 1 
HETATM 30 O O4D NAP . . . H 5 57.366 -13.488 -8.854 1 89.09 ? O4D NAP 706 A 1 
HETATM 31 C C3D NAP . . . H 5 57.781 -13.408 -6.514 1 83.65 ? C3D NAP 706 A 1 
HETATM 32 O O3D NAP . . . H 5 58.791 -13.604 -5.521 1 61.89 ? O3D NAP 706 A 1 
HETATM 33 C C2D NAP . . . H 5 57.582 -11.983 -7.063 1 82.19 ? C2D NAP 706 A 1 
HETATM 34 O O2D NAP . . . H 5 58.762 -11.233 -7.306 1 82.13 ? O2D NAP 706 A 1 
HETATM 35 C C1D NAP . . . H 5 56.867 -12.223 -8.395 1 87.58 ? C1D NAP 706 A 1 
HETATM 36 N N1N NAP . . . H 5 55.353 -12.256 -8.294 1 89.25 ? N1N NAP 706 A 1 
HETATM 37 C C2N NAP . . . H 5 54.678 -11.17 -7.731 1 89.83 ? C2N NAP 706 A 1 
HETATM 38 C C3N NAP . . . H 5 53.272 -11.121 -7.697 1 85.95 ? C3N NAP 706 A 1 
HETATM 39 C C7N NAP . . . H 5 52.627 -9.915 -7.042 1 86.5 ? C7N NAP 706 A 1 
HETATM 40 O O7N NAP . . . H 5 53.046 -8.786 -7.295 1 83.88 ? O7N NAP 706 A 1 
HETATM 41 N N7N NAP . . . H 5 51.637 -10.128 -6.185 1 84.36 ? N7N NAP 706 A 1 
HETATM 42 C C4N NAP . . . H 5 52.529 -12.185 -8.262 1 73.72 ? C4N NAP 706 A 1 
HETATM 43 C C5N NAP . . . H 5 53.183 -13.265 -8.816 1 68.22 ? C5N NAP 706 A 1 
HETATM 44 C C6N NAP . . . H 5 54.58 -13.317 -8.78 1 79.25 ? C6N NAP 706 A 1 
HETATM 45 P P2B NAP . . . H 5 56.939 -24.859 -1.062 1 82.61 ? P2B NAP 706 A 1 
HETATM 46 O O1X NAP . . . H 5 58.397 -24.543 -1.394 1 103.21 ? O1X NAP 706 A 1 
HETATM 47 O O2X NAP . . . H 5 56.705 -24.922 0.46 1 69.15 ? O2X NAP 706 A 1 
HETATM 48 O O3X NAP . . . H 5 56.43 -26.094 -1.813 1 78.01 ? O3X NAP 706 A 1 
#
_model_server_stats.io_time_ms              13 
_model_server_stats.parse_time_ms           14 
_model_server_stats.create_model_time_ms    25 
_model_server_stats.query_time_ms           305 
_model_server_stats.encode_time_ms          8 
_model_server_stats.element_count           48 
#