data_8CPR # _model_server_result.job_id TgEydmTzM8f4o-oeGhrpfQ _model_server_result.datetime_utc '2024-11-26 05:52:01' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8cpr # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":202}' # _entry.id 8CPR # _exptl.entry_id 8CPR _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 22.99 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SODIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 8CPR _cell.length_a 76.413 _cell.length_b 76.413 _cell.length_c 55.862 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8CPR _symmetry.cell_setting ? _symmetry.Int_Tables_number 150 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 3 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_555 y,x,-z -0.5 0.866025 0 0.866025 0.5 0 0 0 -1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OH TYR 33 A TYR 32 1_555 C NA NA . A NA 202 6_655 ? ? ? ? ? ? ? ? ? ? ? ? 2.736 ? metalc ? metalc2 A O GLY 61 A GLY 60 1_555 C NA NA . A NA 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.803 ? metalc ? metalc3 A OE2 GLU 64 A GLU 63 1_555 C NA NA . A NA 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.673 ? # _chem_comp.formula 'Na 1' _chem_comp.formula_weight 22.99 _chem_comp.id NA _chem_comp.mon_nstd_flag . _chem_comp.name 'SODIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 8CPR _atom_sites.fract_transf_matrix[1][1] 0.013087 _atom_sites.fract_transf_matrix[1][2] 0.007556 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015111 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017901 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GDP A 1 201 201 GDP GDP . C 3 NA A 1 202 1 NA NA . D 4 HOH A 1 301 70 HOH HOH . D 4 HOH A 2 302 8 HOH HOH . D 4 HOH A 3 303 28 HOH HOH . D 4 HOH A 4 304 100 HOH HOH . D 4 HOH A 5 305 24 HOH HOH . D 4 HOH A 6 306 115 HOH HOH . D 4 HOH A 7 307 5 HOH HOH . D 4 HOH A 8 308 23 HOH HOH . D 4 HOH A 9 309 7 HOH HOH . D 4 HOH A 10 310 10 HOH HOH . D 4 HOH A 11 311 16 HOH HOH . D 4 HOH A 12 312 77 HOH HOH . D 4 HOH A 13 313 58 HOH HOH . D 4 HOH A 14 314 68 HOH HOH . D 4 HOH A 15 315 33 HOH HOH . D 4 HOH A 16 316 107 HOH HOH . D 4 HOH A 17 317 26 HOH HOH . D 4 HOH A 18 318 13 HOH HOH . D 4 HOH A 19 319 32 HOH HOH . D 4 HOH A 20 320 75 HOH HOH . D 4 HOH A 21 321 9 HOH HOH . D 4 HOH A 22 322 25 HOH HOH . D 4 HOH A 23 323 49 HOH HOH . D 4 HOH A 24 324 27 HOH HOH . D 4 HOH A 25 325 6 HOH HOH . D 4 HOH A 26 326 17 HOH HOH . D 4 HOH A 27 327 113 HOH HOH . D 4 HOH A 28 328 56 HOH HOH . D 4 HOH A 29 329 31 HOH HOH . D 4 HOH A 30 330 20 HOH HOH . D 4 HOH A 31 331 35 HOH HOH . D 4 HOH A 32 332 42 HOH HOH . D 4 HOH A 33 333 4 HOH HOH . D 4 HOH A 34 334 15 HOH HOH . D 4 HOH A 35 335 11 HOH HOH . D 4 HOH A 36 336 41 HOH HOH . D 4 HOH A 37 337 52 HOH HOH . D 4 HOH A 38 338 95 HOH HOH . D 4 HOH A 39 339 63 HOH HOH . D 4 HOH A 40 340 54 HOH HOH . D 4 HOH A 41 341 89 HOH HOH . D 4 HOH A 42 342 59 HOH HOH . D 4 HOH A 43 343 62 HOH HOH . D 4 HOH A 44 344 66 HOH HOH . D 4 HOH A 45 345 2 HOH HOH . D 4 HOH A 46 346 18 HOH HOH . D 4 HOH A 47 347 47 HOH HOH . D 4 HOH A 48 348 76 HOH HOH . D 4 HOH A 49 349 40 HOH HOH . D 4 HOH A 50 350 39 HOH HOH . D 4 HOH A 51 351 104 HOH HOH . D 4 HOH A 52 352 21 HOH HOH . D 4 HOH A 53 353 67 HOH HOH . D 4 HOH A 54 354 73 HOH HOH . D 4 HOH A 55 355 51 HOH HOH . D 4 HOH A 56 356 57 HOH HOH . D 4 HOH A 57 357 74 HOH HOH . D 4 HOH A 58 358 91 HOH HOH . D 4 HOH A 59 359 61 HOH HOH . D 4 HOH A 60 360 90 HOH HOH . D 4 HOH A 61 361 43 HOH HOH . D 4 HOH A 62 362 98 HOH HOH . D 4 HOH A 63 363 110 HOH HOH . D 4 HOH A 64 364 37 HOH HOH . D 4 HOH A 65 365 45 HOH HOH . D 4 HOH A 66 366 19 HOH HOH . D 4 HOH A 67 367 64 HOH HOH . D 4 HOH A 68 368 65 HOH HOH . D 4 HOH A 69 369 69 HOH HOH . D 4 HOH A 70 370 22 HOH HOH . D 4 HOH A 71 371 14 HOH HOH . D 4 HOH A 72 372 88 HOH HOH . D 4 HOH A 73 373 86 HOH HOH . D 4 HOH A 74 374 12 HOH HOH . D 4 HOH A 75 375 94 HOH HOH . D 4 HOH A 76 376 85 HOH HOH . D 4 HOH A 77 377 82 HOH HOH . D 4 HOH A 78 378 81 HOH HOH . D 4 HOH A 79 379 80 HOH HOH . D 4 HOH A 80 380 29 HOH HOH . D 4 HOH A 81 381 71 HOH HOH . D 4 HOH A 82 382 114 HOH HOH . D 4 HOH A 83 383 112 HOH HOH . D 4 HOH A 84 384 34 HOH HOH . D 4 HOH A 85 385 50 HOH HOH . D 4 HOH A 86 386 93 HOH HOH . D 4 HOH A 87 387 84 HOH HOH . D 4 HOH A 88 388 48 HOH HOH . D 4 HOH A 89 389 96 HOH HOH . D 4 HOH A 90 390 83 HOH HOH . D 4 HOH A 91 391 44 HOH HOH . D 4 HOH A 92 392 38 HOH HOH . D 4 HOH A 93 393 36 HOH HOH . D 4 HOH A 94 394 53 HOH HOH . D 4 HOH A 95 395 60 HOH HOH . D 4 HOH A 96 396 92 HOH HOH . D 4 HOH A 97 397 102 HOH HOH . D 4 HOH A 98 398 87 HOH HOH . D 4 HOH A 99 399 46 HOH HOH . D 4 HOH A 100 400 105 HOH HOH . D 4 HOH A 101 401 99 HOH HOH . D 4 HOH A 102 402 79 HOH HOH . D 4 HOH A 103 403 72 HOH HOH . D 4 HOH A 104 404 55 HOH HOH . D 4 HOH A 105 405 1 HOH HOH . D 4 HOH A 106 406 30 HOH HOH . D 4 HOH A 107 407 3 HOH HOH . D 4 HOH A 108 408 101 HOH HOH . D 4 HOH A 109 409 103 HOH HOH . D 4 HOH A 110 410 116 HOH HOH . D 4 HOH A 111 411 111 HOH HOH . D 4 HOH A 112 412 97 HOH HOH . D 4 HOH A 113 413 106 HOH HOH . D 4 HOH A 114 414 108 HOH HOH . D 4 HOH A 115 415 109 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol NA _atom_site.label_atom_id NA _atom_site.label_comp_id NA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x 9.014 _atom_site.Cartn_y 34.406 _atom_site.Cartn_z -2.999 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 76.62 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id NA _atom_site.auth_comp_id NA _atom_site.auth_seq_id 202 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 28 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 267 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 1 #