data_8CRI # _model_server_result.job_id 68hOfaztUJj5Jw5wHk6RRg _model_server_result.datetime_utc '2024-11-16 06:33:06' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8cri # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":901}' # _entry.id 8CRI # _exptl.entry_id 8CRI _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 206.326 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'LIPOIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 98.04 _cell.angle_gamma 90 _cell.entry_id 8CRI _cell.length_a 58.87 _cell.length_b 72.79 _cell.length_c 93.05 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8CRI _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G 1 1 B,H 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C8 H14 O2 S2' _chem_comp.formula_weight 206.326 _chem_comp.id LPA _chem_comp.mon_nstd_flag . _chem_comp.name 'LIPOIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms '5-[(3R)-1,2-dithiolan-3-yl]pentanoic acid' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C2 C1 LPA sing 190 n n C1 O2 LPA doub 191 n n C1 O1 LPA sing 192 n n O1 HO1 LPA sing 193 n n C3 C2 LPA sing 194 n n C2 H2 LPA sing 195 n n C2 H2A LPA sing 196 n n C4 C3 LPA sing 197 n n C3 H3 LPA sing 198 n n C3 H3A LPA sing 199 n n C5 C4 LPA sing 200 n n C4 H4 LPA sing 201 n n C4 H4A LPA sing 202 n n C6 C5 LPA sing 203 n n C5 H5 LPA sing 204 n n C5 H5A LPA sing 205 n n C7 C6 LPA sing 206 n n C6 S6 LPA sing 207 n n C6 H6 LPA sing 208 n n S8 S6 LPA sing 209 n n C8 C7 LPA sing 210 n n C7 H7 LPA sing 211 n n C7 H7A LPA sing 212 n n C8 S8 LPA sing 213 n n C8 H8 LPA sing 214 n n C8 H8A LPA sing 215 n n # _atom_sites.entry_id 8CRI _atom_sites.fract_transf_matrix[1][1] 0.016987 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002401 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013738 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010854 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 LPA A 1 901 901 LPA LPA . D 3 CL A 1 902 3 CL CL . E 4 SO4 A 1 903 4 SO4 SO4 . F 5 EDO A 1 904 5 EDO EDO . G 6 HOH A 1 1001 80 HOH HOH . G 6 HOH A 2 1002 11 HOH HOH . G 6 HOH A 3 1003 21 HOH HOH . G 6 HOH A 4 1004 15 HOH HOH . G 6 HOH A 5 1005 48 HOH HOH . G 6 HOH A 6 1006 88 HOH HOH . G 6 HOH A 7 1007 16 HOH HOH . G 6 HOH A 8 1008 24 HOH HOH . G 6 HOH A 9 1009 39 HOH HOH . G 6 HOH A 10 1010 81 HOH HOH . G 6 HOH A 11 1011 66 HOH HOH . G 6 HOH A 12 1012 69 HOH HOH . G 6 HOH A 13 1013 46 HOH HOH . G 6 HOH A 14 1014 94 HOH HOH . G 6 HOH A 15 1015 19 HOH HOH . G 6 HOH A 16 1016 54 HOH HOH . G 6 HOH A 17 1017 13 HOH HOH . G 6 HOH A 18 1018 17 HOH HOH . G 6 HOH A 19 1019 14 HOH HOH . G 6 HOH A 20 1020 97 HOH HOH . G 6 HOH A 21 1021 8 HOH HOH . G 6 HOH A 22 1022 76 HOH HOH . G 6 HOH A 23 1023 7 HOH HOH . G 6 HOH A 24 1024 44 HOH HOH . G 6 HOH A 25 1025 78 HOH HOH . G 6 HOH A 26 1026 29 HOH HOH . G 6 HOH A 27 1027 52 HOH HOH . G 6 HOH A 28 1028 65 HOH HOH . G 6 HOH A 29 1029 23 HOH HOH . G 6 HOH A 30 1030 59 HOH HOH . G 6 HOH A 31 1031 28 HOH HOH . G 6 HOH A 32 1032 36 HOH HOH . G 6 HOH A 33 1033 10 HOH HOH . G 6 HOH A 34 1034 37 HOH HOH . G 6 HOH A 35 1035 73 HOH HOH . G 6 HOH A 36 1036 62 HOH HOH . G 6 HOH A 37 1037 38 HOH HOH . G 6 HOH A 38 1038 35 HOH HOH . G 6 HOH A 39 1039 87 HOH HOH . G 6 HOH A 40 1040 53 HOH HOH . G 6 HOH A 41 1041 98 HOH HOH . G 6 HOH A 42 1042 42 HOH HOH . G 6 HOH A 43 1043 25 HOH HOH . G 6 HOH A 44 1044 60 HOH HOH . G 6 HOH A 45 1045 33 HOH HOH . G 6 HOH A 46 1046 45 HOH HOH . G 6 HOH A 47 1047 20 HOH HOH . G 6 HOH A 48 1048 12 HOH HOH . G 6 HOH A 49 1049 22 HOH HOH . G 6 HOH A 50 1050 100 HOH HOH . G 6 HOH A 51 1051 34 HOH HOH . G 6 HOH A 52 1052 32 HOH HOH . G 6 HOH A 53 1053 79 HOH HOH . G 6 HOH A 54 1054 105 HOH HOH . G 6 HOH A 55 1055 70 HOH HOH . G 6 HOH A 56 1056 71 HOH HOH . G 6 HOH A 57 1057 96 HOH HOH . G 6 HOH A 58 1058 18 HOH HOH . G 6 HOH A 59 1059 85 HOH HOH . G 6 HOH A 60 1060 91 HOH HOH . G 6 HOH A 61 1061 90 HOH HOH . G 6 HOH A 62 1062 77 HOH HOH . G 6 HOH A 63 1063 67 HOH HOH . G 6 HOH A 64 1064 47 HOH HOH . G 6 HOH A 65 1065 63 HOH HOH . G 6 HOH A 66 1066 102 HOH HOH . G 6 HOH A 67 1067 41 HOH HOH . G 6 HOH A 68 1068 101 HOH HOH . G 6 HOH A 69 1069 103 HOH HOH . G 6 HOH A 70 1070 75 HOH HOH . G 6 HOH A 71 1071 74 HOH HOH . G 6 HOH A 72 1072 84 HOH HOH . G 6 HOH A 73 1073 57 HOH HOH . H 6 HOH B 1 401 61 HOH HOH . H 6 HOH B 2 402 51 HOH HOH . H 6 HOH B 3 403 43 HOH HOH . H 6 HOH B 4 404 72 HOH HOH . H 6 HOH B 5 405 56 HOH HOH . H 6 HOH B 6 406 31 HOH HOH . H 6 HOH B 7 407 55 HOH HOH . H 6 HOH B 8 408 99 HOH HOH . H 6 HOH B 9 409 106 HOH HOH . H 6 HOH B 10 410 9 HOH HOH . H 6 HOH B 11 411 68 HOH HOH . H 6 HOH B 12 412 49 HOH HOH . H 6 HOH B 13 413 89 HOH HOH . H 6 HOH B 14 414 86 HOH HOH . H 6 HOH B 15 415 104 HOH HOH . H 6 HOH B 16 416 92 HOH HOH . H 6 HOH B 17 417 82 HOH HOH . H 6 HOH B 18 418 26 HOH HOH . H 6 HOH B 19 419 83 HOH HOH . H 6 HOH B 20 420 95 HOH HOH . H 6 HOH B 21 421 64 HOH HOH . H 6 HOH B 22 422 27 HOH HOH . H 6 HOH B 23 423 40 HOH HOH . H 6 HOH B 24 424 50 HOH HOH . H 6 HOH B 25 425 30 HOH HOH . H 6 HOH B 26 426 58 HOH HOH . H 6 HOH B 27 427 93 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 LPA . . . C 2 13.666 -11.489 -1.024 1 41.08 ? C1 LPA 901 A 1 HETATM 2 O O1 LPA . . . C 2 13.361 -12.655 -1.285 1 40.49 ? O1 LPA 901 A 1 HETATM 3 C C2 LPA . . . C 2 14.709 -11.203 0.039 1 39.67 ? C2 LPA 901 A 1 HETATM 4 O O2 LPA . . . C 2 13.205 -10.526 -1.616 1 42.78 ? O2 LPA 901 A 1 HETATM 5 C C3 LPA . . . C 2 15.591 -12.321 0.414 1 38.06 ? C3 LPA 901 A 1 HETATM 6 C C4 LPA . . . C 2 17.025 -11.931 0.69 1 36.66 ? C4 LPA 901 A 1 HETATM 7 C C5 LPA . . . C 2 17.306 -11.13 1.953 1 35.6 ? C5 LPA 901 A 1 HETATM 8 C C6 LPA . . . C 2 18.729 -11.199 2.451 1 35.08 ? C6 LPA 901 A 1 HETATM 9 S S6 LPA . . . C 2 19.996 -10.748 1.194 1 35.13 ? S6 LPA 901 A 1 HETATM 10 C C7 LPA . . . C 2 18.947 -10.318 3.664 1 34.19 ? C7 LPA 901 A 1 HETATM 11 C C8 LPA . . . C 2 20.381 -10.299 4.002 1 33.77 ? C8 LPA 901 A 1 HETATM 12 S S8 LPA . . . C 2 21.472 -10.753 2.613 1 34.45 ? S8 LPA 901 A 1 # _model_server_stats.io_time_ms 23 _model_server_stats.parse_time_ms 20 _model_server_stats.create_model_time_ms 21 _model_server_stats.query_time_ms 285 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 12 #