data_8CTA
#
_model_server_result.job_id            lBOLUbw8y2yFdJIt1NWsUA 
_model_server_result.datetime_utc      '2025-03-06 07:46:35' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8cta 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"Y","auth_seq_id":302}' 
#
_entry.id    8CTA 
#
_exptl.entry_id    8CTA 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    27 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          103.61 
_cell.angle_gamma         90 
_cell.entry_id            8CTA 
_cell.length_a            181.51 
_cell.length_b            116.51 
_cell.length_c            112.8 
_cell.Z_PDB               32 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8CTA 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? tetrameric 4 author_defined_assembly 1 
? tetrameric 4 author_defined_assembly 2 
? tetrameric 4 author_defined_assembly 3 
? tetrameric 4 author_defined_assembly 4 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,C,D,Q,R,S,T,U,V,W,ZA,AB,BB 1 1 
E,F,G,H,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,CB,DB,EB 2 1 
I,J,K,L,JA,KA,LA,MA,NA,OA,PA,QA,RA,FB,GB,HB 3 1 
M,N,O,P,SA,TA,UA,VA,WA,XA,YA,IB,JB,KB,LB 4 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 R N N 
? 4 T N N 
? 4 U N N 
? 4 V N N 
? 4 W N N 
? 4 Y N N 
? 4 Z N N 
? 4 AA N N 
? 4 BA N N 
? 4 DA N N 
? 4 EA N N 
? 4 FA N N 
? 4 GA N N 
? 4 HA N N 
? 4 IA N N 
? 4 KA N N 
? 4 MA N N 
? 4 NA N N 
? 4 OA N N 
? 4 PA N N 
? 4 QA N N 
? 4 RA N N 
? 4 TA N N 
? 4 VA N N 
? 4 WA N N 
? 4 XA N N 
? 4 YA N N 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 83 n n 
C1 C2 EDO sing 84 n n 
C1 H11 EDO sing 85 n n 
C1 H12 EDO sing 86 n n 
O1 HO1 EDO sing 87 n n 
C2 O2 EDO sing 88 n n 
C2 H21 EDO sing 89 n n 
C2 H22 EDO sing 90 n n 
O2 HO2 EDO sing 91 n n 
#
_atom_sites.entry_id                     8CTA 
_atom_sites.fract_transf_matrix[1][1]    0.005509 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.001334 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008583 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009121 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
Q 3 L3D A 1 301 300 L3D L3D . 
R 4 EDO A 1 302 401 EDO EDO . 
S 3 L3D B 1 301 300 L3D L3D . 
T 4 EDO B 1 302 401 EDO EDO . 
U 4 EDO B 1 303 501 EDO EDO . 
V 4 EDO D 1 301 301 EDO EDO . 
W 4 EDO D 1 302 401 EDO EDO . 
X 3 L3D E 1 301 300 L3D L3D . 
Y 4 EDO E 1 302 401 EDO EDO . 
Z 4 EDO E 1 303 601 EDO EDO . 
AA 4 EDO E 1 304 501 EDO EDO . 
BA 4 EDO F 1 501 501 EDO EDO . 
CA 3 L3D F 1 502 300 L3D L3D . 
DA 4 EDO F 1 503 401 EDO EDO . 
EA 4 EDO F 1 504 601 EDO EDO . 
FA 4 EDO F 1 505 701 EDO EDO . 
GA 4 EDO F 1 506 801 EDO EDO . 
HA 4 EDO G 1 301 301 EDO EDO . 
IA 4 EDO H 1 301 301 EDO EDO . 
JA 3 L3D I 1 301 300 L3D L3D . 
KA 4 EDO I 1 302 401 EDO EDO . 
LA 3 L3D J 1 301 300 L3D L3D . 
MA 4 EDO J 1 302 401 EDO EDO . 
NA 4 EDO K 1 501 501 EDO EDO . 
OA 4 EDO K 1 502 601 EDO EDO . 
PA 4 EDO L 1 501 501 EDO EDO . 
QA 4 EDO L 1 502 601 EDO EDO . 
RA 4 EDO L 1 503 701 EDO EDO . 
SA 3 L3D M 1 301 300 L3D L3D . 
TA 4 EDO M 1 302 401 EDO EDO . 
UA 3 L3D N 1 301 300 L3D L3D . 
VA 4 EDO N 1 302 401 EDO EDO . 
WA 4 EDO N 1 303 501 EDO EDO . 
XA 4 EDO O 1 301 301 EDO EDO . 
YA 4 EDO P 1 301 301 EDO EDO . 
ZA 5 HOH A 1 401 46 HOH HOH . 
ZA 5 HOH A 2 402 27 HOH HOH . 
AB 5 HOH B 1 401 13 HOH HOH . 
AB 5 HOH B 2 402 61 HOH HOH . 
BB 5 HOH D 1 401 60 HOH HOH . 
BB 5 HOH D 2 402 95 HOH HOH . 
BB 5 HOH D 3 403 63 HOH HOH . 
CB 5 HOH E 1 401 92 HOH HOH . 
CB 5 HOH E 2 402 14 HOH HOH . 
CB 5 HOH E 3 403 96 HOH HOH . 
CB 5 HOH E 4 404 28 HOH HOH . 
CB 5 HOH E 5 405 34 HOH HOH . 
DB 5 HOH F 1 601 94 HOH HOH . 
DB 5 HOH F 2 602 3 HOH HOH . 
DB 5 HOH F 3 603 5 HOH HOH . 
DB 5 HOH F 4 604 31 HOH HOH . 
DB 5 HOH F 5 605 20 HOH HOH . 
EB 5 HOH H 1 401 48 HOH HOH . 
EB 5 HOH H 2 402 11 HOH HOH . 
EB 5 HOH H 3 403 2 HOH HOH . 
EB 5 HOH H 4 404 19 HOH HOH . 
EB 5 HOH H 5 405 91 HOH HOH . 
FB 5 HOH I 1 401 80 HOH HOH . 
FB 5 HOH I 2 402 7 HOH HOH . 
FB 5 HOH I 3 403 1 HOH HOH . 
FB 5 HOH I 4 404 6 HOH HOH . 
FB 5 HOH I 5 405 65 HOH HOH . 
FB 5 HOH I 6 406 54 HOH HOH . 
FB 5 HOH I 7 407 43 HOH HOH . 
FB 5 HOH I 8 408 32 HOH HOH . 
FB 5 HOH I 9 409 66 HOH HOH . 
GB 5 HOH J 1 401 51 HOH HOH . 
GB 5 HOH J 2 402 40 HOH HOH . 
GB 5 HOH J 3 403 42 HOH HOH . 
GB 5 HOH J 4 404 55 HOH HOH . 
GB 5 HOH J 5 405 59 HOH HOH . 
GB 5 HOH J 6 406 15 HOH HOH . 
GB 5 HOH J 7 407 83 HOH HOH . 
GB 5 HOH J 8 408 74 HOH HOH . 
HB 5 HOH L 1 601 21 HOH HOH . 
HB 5 HOH L 2 602 9 HOH HOH . 
HB 5 HOH L 3 603 4 HOH HOH . 
HB 5 HOH L 4 604 22 HOH HOH . 
HB 5 HOH L 5 605 84 HOH HOH . 
HB 5 HOH L 6 606 71 HOH HOH . 
HB 5 HOH L 7 607 87 HOH HOH . 
IB 5 HOH M 1 401 72 HOH HOH . 
IB 5 HOH M 2 402 77 HOH HOH . 
IB 5 HOH M 3 403 29 HOH HOH . 
IB 5 HOH M 4 404 75 HOH HOH . 
IB 5 HOH M 5 405 17 HOH HOH . 
IB 5 HOH M 6 406 93 HOH HOH . 
JB 5 HOH N 1 401 33 HOH HOH . 
JB 5 HOH N 2 402 16 HOH HOH . 
JB 5 HOH N 3 403 8 HOH HOH . 
JB 5 HOH N 4 404 18 HOH HOH . 
JB 5 HOH N 5 405 49 HOH HOH . 
JB 5 HOH N 6 406 73 HOH HOH . 
JB 5 HOH N 7 407 41 HOH HOH . 
JB 5 HOH N 8 408 23 HOH HOH . 
JB 5 HOH N 9 409 24 HOH HOH . 
JB 5 HOH N 10 410 35 HOH HOH . 
JB 5 HOH N 11 411 12 HOH HOH . 
KB 5 HOH O 1 401 30 HOH HOH . 
LB 5 HOH P 1 401 38 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . Y 4 27.424 35.405 55.094 1 108.32 ? C1 EDO 302 E 1 
HETATM 2 O O1 EDO . . . Y 4 26.306 35.905 55.804 1 118.43 ? O1 EDO 302 E 1 
HETATM 3 C C2 EDO . . . Y 4 27.237 35.325 53.628 1 99.87 ? C2 EDO 302 E 1 
HETATM 4 O O2 EDO . . . Y 4 26.186 34.458 53.229 1 84.5 ? O2 EDO 302 E 1 
#
_model_server_stats.io_time_ms              33 
_model_server_stats.parse_time_ms           13 
_model_server_stats.create_model_time_ms    26 
_model_server_stats.query_time_ms           271 
_model_server_stats.encode_time_ms          8 
_model_server_stats.element_count           4 
#