data_8CTE # _model_server_result.job_id sJL1ylOA-E-BRV1MY3bYIQ _model_server_result.datetime_utc '2025-02-05 04:03:53' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8cte # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"X","auth_seq_id":1002}' # _entry.id 8CTE # _exptl.entry_id 8CTE _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 221.208 _entity.id 10 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-acetamido-2-deoxy-beta-D-glucopyranose _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8CTE _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 8CTE _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetradecameric _pdbx_struct_assembly.oligomeric_count 14 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 10 T N N ? 10 X N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 I ND2 ASN 642 P ASN 642 1_555 T C1 NAG . P NAG 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.44 ? covale ? covale2 J ND2 ASN 642 T ASN 642 1_555 X C1 NAG . T NAG 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.44 ? covale ? covale3 K C SER 86 S SER 86 1_555 K N P1L 87 S P1L 87 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale4 K C P1L 87 S P1L 87 1_555 K N GLN 88 S GLN 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale5 L C SER 86 O SER 86 1_555 L N P1L 87 O P1L 87 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale6 L C P1L 87 O P1L 87 1_555 L N GLN 88 O GLN 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale7 M C SER 86 R SER 86 1_555 M N P1L 87 R P1L 87 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale8 M C P1L 87 R P1L 87 1_555 M N GLN 88 R GLN 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale9 N C SER 86 M SER 86 1_555 N N P1L 87 M P1L 87 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale10 N C P1L 87 M P1L 87 1_555 N N GLN 88 M GLN 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? # _chem_comp.formula 'C8 H15 N O6' _chem_comp.formula_weight 221.208 _chem_comp.id NAG _chem_comp.mon_nstd_flag . _chem_comp.name 2-acetamido-2-deoxy-beta-D-glucopyranose _chem_comp.type 'd-saccharide, beta linking' _chem_comp.pdbx_synonyms N-acetyl-beta-D-glucosamine;2-acetamido-2-deoxy-beta-D-glucose;2-acetamido-2-deoxy-D-glucose;2-acetamido-2-deoxy-glucose;N-ACETYL-D-GLUCOSAMINE # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.identifier _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version NAG DGlcpNAcb 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1 NAG N-acetyl-b-D-glucopyranosamine 'COMMON NAME' GMML 1 NAG b-D-GlcpNAc 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1 NAG GlcNAc 'SNFG CARBOHYDRATE SYMBOL' GMML 1 # _atom_sites.entry_id 8CTE _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code O 8 CLR L 1 501 501 CLR CLR . P 8 CLR L 1 502 502 CLR CLR . Q 9 AJP Q 1 501 502 AJP AJP . R 9 AJP Q 1 502 503 AJP AJP . S 8 CLR P 1 1001 201 CLR CLR . T 10 NAG P 1 1002 895 NAG NAG . U 8 CLR P 1 1003 901 CLR CLR . V 11 PIO P 1 1004 901 PIO PIO . W 8 CLR T 1 1001 201 CLR CLR . X 10 NAG T 1 1002 895 NAG NAG . Y 8 CLR T 1 1003 901 CLR CLR . Z 11 PIO T 1 1004 901 PIO PIO . AA 8 CLR S 1 301 2008 CLR CLR . BA 8 CLR R 1 301 2008 CLR CLR . CA 8 CLR M 1 301 2008 CLR CLR . DA 8 CLR M 1 302 2008 CLR CLR . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 NAG . . . X 10 238.429 163.12 135.051 1 41.79 ? C1 NAG 1002 T 1 HETATM 2 C C2 NAG . . . X 10 238.419 163.541 133.581 1 41.97 ? C2 NAG 1002 T 1 HETATM 3 C C3 NAG . . . X 10 239.717 163.115 132.899 1 41.44 ? C3 NAG 1002 T 1 HETATM 4 C C4 NAG . . . X 10 240.922 163.63 133.675 1 42.33 ? C4 NAG 1002 T 1 HETATM 5 C C5 NAG . . . X 10 240.829 163.204 135.138 1 42.67 ? C5 NAG 1002 T 1 HETATM 6 C C6 NAG . . . X 10 241.931 163.784 135.993 1 43.86 ? C6 NAG 1002 T 1 HETATM 7 C C7 NAG . . . X 10 236.652 163.605 131.877 1 41.93 ? C7 NAG 1002 T 1 HETATM 8 C C8 NAG . . . X 10 235.485 162.881 131.276 1 42.43 ? C8 NAG 1002 T 1 HETATM 9 N N2 NAG . . . X 10 237.27 162.982 132.886 1 42.65 ? N2 NAG 1002 T 1 HETATM 10 O O3 NAG . . . X 10 239.744 163.623 131.57 1 40.52 ? O3 NAG 1002 T 1 HETATM 11 O O4 NAG . . . X 10 242.121 163.11 133.111 1 41.39 ? O4 NAG 1002 T 1 HETATM 12 O O5 NAG . . . X 10 239.589 163.658 135.698 1 43.2 ? O5 NAG 1002 T 1 HETATM 13 O O6 NAG . . . X 10 241.787 163.401 137.354 1 45.47 ? O6 NAG 1002 T 1 HETATM 14 O O7 NAG . . . X 10 237.019 164.702 131.468 1 39.1 ? O7 NAG 1002 T 1 # _model_server_stats.io_time_ms 33 _model_server_stats.parse_time_ms 23 _model_server_stats.create_model_time_ms 92 _model_server_stats.query_time_ms 338 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 14 #