data_8CTE # _model_server_result.job_id S3Lg_ZfbsZ6PNG9tFtF-Lg _model_server_result.datetime_utc '2025-02-05 03:50:41' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8cte # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"Q","auth_seq_id":501}' # _entry.id 8CTE # _exptl.entry_id 8CTE _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 1229.312 _entity.id 9 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description Digitonin _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8CTE _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 8CTE _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetradecameric _pdbx_struct_assembly.oligomeric_count 14 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 9 Q N N ? 9 R N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 I ND2 ASN 642 P ASN 642 1_555 T C1 NAG . P NAG 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.44 ? covale ? covale2 J ND2 ASN 642 T ASN 642 1_555 X C1 NAG . T NAG 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.44 ? covale ? covale3 K C SER 86 S SER 86 1_555 K N P1L 87 S P1L 87 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale4 K C P1L 87 S P1L 87 1_555 K N GLN 88 S GLN 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale5 L C SER 86 O SER 86 1_555 L N P1L 87 O P1L 87 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale6 L C P1L 87 O P1L 87 1_555 L N GLN 88 O GLN 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale7 M C SER 86 R SER 86 1_555 M N P1L 87 R P1L 87 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale8 M C P1L 87 R P1L 87 1_555 M N GLN 88 R GLN 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale9 N C SER 86 M SER 86 1_555 N N P1L 87 M P1L 87 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale10 N C P1L 87 M P1L 87 1_555 N N GLN 88 M GLN 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? # _chem_comp.formula 'C56 H92 O29' _chem_comp.formula_weight 1229.312 _chem_comp.id AJP _chem_comp.mon_nstd_flag . _chem_comp.name Digitonin _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 8CTE _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code O 8 CLR L 1 501 501 CLR CLR . P 8 CLR L 1 502 502 CLR CLR . Q 9 AJP Q 1 501 502 AJP AJP . R 9 AJP Q 1 502 503 AJP AJP . S 8 CLR P 1 1001 201 CLR CLR . T 10 NAG P 1 1002 895 NAG NAG . U 8 CLR P 1 1003 901 CLR CLR . V 11 PIO P 1 1004 901 PIO PIO . W 8 CLR T 1 1001 201 CLR CLR . X 10 NAG T 1 1002 895 NAG NAG . Y 8 CLR T 1 1003 901 CLR CLR . Z 11 PIO T 1 1004 901 PIO PIO . AA 8 CLR S 1 301 2008 CLR CLR . BA 8 CLR R 1 301 2008 CLR CLR . CA 8 CLR M 1 301 2008 CLR CLR . DA 8 CLR M 1 302 2008 CLR CLR . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C01 AJP . . . Q 9 208.494 128.135 222.182 1 30.73 ? C01 AJP 501 Q 1 HETATM 2 C C02 AJP . . . Q 9 207.44 127.174 222.699 1 28.61 ? C02 AJP 501 Q 1 HETATM 3 C C03 AJP . . . Q 9 208.044 125.883 223.244 1 30.5 ? C03 AJP 501 Q 1 HETATM 4 C C04 AJP . . . Q 9 207.32 124.674 222.683 1 29.66 ? C04 AJP 501 Q 1 HETATM 5 C C05 AJP . . . Q 9 207.358 124.649 221.175 1 26.87 ? C05 AJP 501 Q 1 HETATM 6 C C06 AJP . . . Q 9 206.49 123.586 220.506 1 29.56 ? C06 AJP 501 Q 1 HETATM 7 C C07 AJP . . . Q 9 207.29 123.187 219.253 1 29.18 ? C07 AJP 501 Q 1 HETATM 8 C C08 AJP . . . Q 9 208.594 124.012 219.378 1 29.64 ? C08 AJP 501 Q 1 HETATM 9 O O09 AJP . . . Q 9 208.683 124.343 220.774 1 35.45 ? O09 AJP 501 Q 1 HETATM 10 C C10 AJP . . . Q 9 209.75 123.087 218.979 1 30.02 ? C10 AJP 501 Q 1 HETATM 11 C C11 AJP . . . Q 9 209.055 121.921 218.273 1 34.55 ? C11 AJP 501 Q 1 HETATM 12 C C12 AJP . . . Q 9 207.744 121.714 219.049 1 33.74 ? C12 AJP 501 Q 1 HETATM 13 C C13 AJP . . . Q 9 206.862 120.854 218.15 1 29.39 ? C13 AJP 501 Q 1 HETATM 14 C C14 AJP . . . Q 9 207.544 119.528 217.79 1 25.67 ? C14 AJP 501 Q 1 HETATM 15 C C15 AJP . . . Q 9 208.981 119.667 217.261 1 30.46 ? C15 AJP 501 Q 1 HETATM 16 C C16 AJP . . . Q 9 209.832 120.629 218.117 1 30.4 ? C16 AJP 501 Q 1 HETATM 17 C C17 AJP . . . Q 9 211.207 120.865 217.5 1 29.23 ? C17 AJP 501 Q 1 HETATM 18 C C18 AJP . . . Q 9 211.936 119.558 217.21 1 29.53 ? C18 AJP 501 Q 1 HETATM 19 C C19 AJP . . . Q 9 211.074 118.641 216.35 1 25.92 ? C19 AJP 501 Q 1 HETATM 20 C C20 AJP . . . Q 9 209.72 118.317 217.034 1 28.28 ? C20 AJP 501 Q 1 HETATM 21 C C21 AJP . . . Q 9 208.922 117.373 216.109 1 26.8 ? C21 AJP 501 Q 1 HETATM 22 C C22 AJP . . . Q 9 209.71 116.126 215.746 1 30.42 ? C22 AJP 501 Q 1 HETATM 23 C C23 AJP . . . Q 9 210.986 116.5 215.017 1 30.48 ? C23 AJP 501 Q 1 HETATM 24 C C24 AJP . . . Q 9 211.844 117.396 215.89 1 29.43 ? C24 AJP 501 Q 1 HETATM 25 O O25 AJP . . . Q 9 211.695 115.302 214.664 1 34.57 ? O25 AJP 501 Q 1 HETATM 26 O O79 AJP . . . Q 9 208.926 115.258 214.918 1 34.83 ? O79 AJP 501 Q 1 HETATM 27 C C80 AJP . . . Q 9 209.951 117.593 218.371 1 25.31 ? C80 AJP 501 Q 1 HETATM 28 C C81 AJP . . . Q 9 207.966 121.008 220.391 1 25.77 ? C81 AJP 501 Q 1 HETATM 29 O O82 AJP . . . Q 9 210.462 122.624 220.109 1 33.5 ? O82 AJP 501 Q 1 HETATM 30 C C83 AJP . . . Q 9 205.045 123.989 220.241 1 33.55 ? C83 AJP 501 Q 1 HETATM 31 O O84 AJP . . . Q 9 206.98 125.916 220.642 1 34.2 ? O84 AJP 501 Q 1 HETATM 32 C C85 AJP . . . Q 9 206.445 126.823 221.609 1 34.83 ? C85 AJP 501 Q 1 # _model_server_stats.io_time_ms 121 _model_server_stats.parse_time_ms 36 _model_server_stats.create_model_time_ms 100 _model_server_stats.query_time_ms 341 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 32 #