data_8CU7 # _model_server_result.job_id OyUrb7wSyc-2B8HdH0MWNw _model_server_result.datetime_utc '2024-11-26 05:57:00' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8cu7 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":1203}' # _entry.id 8CU7 # _exptl.entry_id 8CU7 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 22.99 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SODIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8CU7 _cell.length_a 39.456 _cell.length_b 179.58 _cell.length_c 140.873 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8CU7 _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 96 A CYS 71 1_555 A SG CYS 184 A CYS 159 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf2 A SG CYS 99 A CYS 74 1_555 A SG CYS 171 A CYS 146 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf3 A SG CYS 102 A CYS 77 1_555 A SG CYS 191 A CYS 166 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf4 A SG CYS 380 A CYS 259 1_555 A SG CYS 383 A CYS 262 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? metalc ? metalc1 A OD1 ASP 77 A ASP 52 1_555 D NA NA . A NA 1203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.499 ? metalc ? metalc2 A OG SER 116 A SER 91 1_555 D NA NA . A NA 1203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.531 ? metalc ? metalc3 D NA NA . A NA 1203 1_555 PA O HOH . A HOH 1318 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.267 ? metalc ? metalc4 D NA NA . A NA 1203 1_555 PA O HOH . A HOH 1350 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.632 ? metalc ? metalc5 D NA NA . A NA 1203 1_555 PA O HOH . A HOH 1387 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.625 ? metalc ? metalc6 D NA NA . A NA 1203 1_555 PA O HOH . A HOH 1393 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.163 ? # _chem_comp.formula 'Na 1' _chem_comp.formula_weight 22.99 _chem_comp.id NA _chem_comp.mon_nstd_flag . _chem_comp.name 'SODIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 8CU7 _atom_sites.fract_transf_matrix[1][1] 0.025345 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005569 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007099 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PEG A 1 1201 501 PEG PEG . C 3 LJX A 1 1202 2300 LJX LJX . D 4 NA A 1 1203 2400 NA NA . E 5 OLC A 1 1204 401 OLC OLC . F 6 OLA A 1 1205 502 OLA OLA . G 5 OLC A 1 1206 503 OLC OLC . H 6 OLA A 1 1207 504 OLA OLA . I 6 OLA A 1 1208 505 OLA OLA . J 7 CLR A 1 1209 2402 CLR CLR . K 7 CLR A 1 1210 2403 CLR CLR . L 7 CLR A 1 1211 2404 CLR CLR . M 6 OLA A 1 1212 2405 OLA OLA . N 6 OLA A 1 1213 2406 OLA OLA . O 6 OLA A 1 1214 2407 OLA OLA . P 6 OLA A 1 1215 2410 OLA OLA . Q 6 OLA A 1 1216 2411 OLA OLA . R 6 OLA A 1 1217 2413 OLA OLA . S 6 OLA A 1 1218 2414 OLA OLA . T 6 OLA A 1 1219 2415 OLA OLA . U 6 OLA A 1 1220 2420 OLA OLA . V 6 OLA A 1 1221 2423 OLA OLA . W 5 OLC A 1 1222 2435 OLC OLC . X 5 OLC A 1 1223 2436 OLC OLC . Y 6 OLA A 1 1224 2438 OLA OLA . Z 6 OLA A 1 1225 2440 OLA OLA . AA 6 OLA A 1 1226 2441 OLA OLA . BA 6 OLA A 1 1227 2442 OLA OLA . CA 6 OLA A 1 1228 2443 OLA OLA . DA 6 OLA A 1 1229 2446 OLA OLA . EA 6 OLA A 1 1230 2447 OLA OLA . FA 6 OLA A 1 1231 2448 OLA OLA . GA 6 OLA A 1 1232 2449 OLA OLA . HA 6 OLA A 1 1233 2450 OLA OLA . IA 8 ETF A 1 1234 2451 ETF ETF . JA 2 PEG A 1 1235 2454 PEG PEG . KA 2 PEG A 1 1236 2455 PEG PEG . LA 2 PEG A 1 1237 2457 PEG PEG . MA 5 OLC A 1 1238 2678 OLC OLC . NA 5 OLC A 1 1239 2679 OLC OLC . OA 5 OLC A 1 1240 2680 OLC OLC . PA 9 HOH A 1 1301 2557 HOH HOH . PA 9 HOH A 2 1302 27 HOH HOH . PA 9 HOH A 3 1303 15 HOH HOH . PA 9 HOH A 4 1304 2473 HOH HOH . PA 9 HOH A 5 1305 2664 HOH HOH . PA 9 HOH A 6 1306 2524 HOH HOH . PA 9 HOH A 7 1307 2489 HOH HOH . PA 9 HOH A 8 1308 2539 HOH HOH . PA 9 HOH A 9 1309 2545 HOH HOH . PA 9 HOH A 10 1310 2637 HOH HOH . PA 9 HOH A 11 1311 2505 HOH HOH . PA 9 HOH A 12 1312 2625 HOH HOH . PA 9 HOH A 13 1313 2640 HOH HOH . PA 9 HOH A 14 1314 2502 HOH HOH . PA 9 HOH A 15 1315 2547 HOH HOH . PA 9 HOH A 16 1316 2520 HOH HOH . PA 9 HOH A 17 1317 2600 HOH HOH . PA 9 HOH A 18 1318 35 HOH HOH . PA 9 HOH A 19 1319 2507 HOH HOH . PA 9 HOH A 20 1320 2510 HOH HOH . PA 9 HOH A 21 1321 5 HOH HOH . PA 9 HOH A 22 1322 29 HOH HOH . PA 9 HOH A 23 1323 2667 HOH HOH . PA 9 HOH A 24 1324 2561 HOH HOH . PA 9 HOH A 25 1325 2503 HOH HOH . PA 9 HOH A 26 1326 2 HOH HOH . PA 9 HOH A 27 1327 2571 HOH HOH . PA 9 HOH A 28 1328 37 HOH HOH . PA 9 HOH A 29 1329 2657 HOH HOH . PA 9 HOH A 30 1330 2642 HOH HOH . PA 9 HOH A 31 1331 28 HOH HOH . PA 9 HOH A 32 1332 2512 HOH HOH . PA 9 HOH A 33 1333 2555 HOH HOH . PA 9 HOH A 34 1334 2485 HOH HOH . PA 9 HOH A 35 1335 30 HOH HOH . PA 9 HOH A 36 1336 2493 HOH HOH . PA 9 HOH A 37 1337 2540 HOH HOH . PA 9 HOH A 38 1338 2576 HOH HOH . PA 9 HOH A 39 1339 32 HOH HOH . PA 9 HOH A 40 1340 2575 HOH HOH . PA 9 HOH A 41 1341 2527 HOH HOH . PA 9 HOH A 42 1342 2666 HOH HOH . PA 9 HOH A 43 1343 2535 HOH HOH . PA 9 HOH A 44 1344 2498 HOH HOH . PA 9 HOH A 45 1345 2624 HOH HOH . PA 9 HOH A 46 1346 2506 HOH HOH . PA 9 HOH A 47 1347 10 HOH HOH . PA 9 HOH A 48 1348 2626 HOH HOH . PA 9 HOH A 49 1349 2477 HOH HOH . PA 9 HOH A 50 1350 2513 HOH HOH . PA 9 HOH A 51 1351 2486 HOH HOH . PA 9 HOH A 52 1352 2501 HOH HOH . PA 9 HOH A 53 1353 2674 HOH HOH . PA 9 HOH A 54 1354 2466 HOH HOH . PA 9 HOH A 55 1355 2661 HOH HOH . PA 9 HOH A 56 1356 2622 HOH HOH . PA 9 HOH A 57 1357 2515 HOH HOH . PA 9 HOH A 58 1358 2568 HOH HOH . PA 9 HOH A 59 1359 2647 HOH HOH . PA 9 HOH A 60 1360 2550 HOH HOH . PA 9 HOH A 61 1361 2662 HOH HOH . PA 9 HOH A 62 1362 2532 HOH HOH . PA 9 HOH A 63 1363 2494 HOH HOH . PA 9 HOH A 64 1364 2558 HOH HOH . PA 9 HOH A 65 1365 2526 HOH HOH . PA 9 HOH A 66 1366 2518 HOH HOH . PA 9 HOH A 67 1367 2483 HOH HOH . PA 9 HOH A 68 1368 2462 HOH HOH . PA 9 HOH A 69 1369 2541 HOH HOH . PA 9 HOH A 70 1370 22 HOH HOH . PA 9 HOH A 71 1371 2488 HOH HOH . PA 9 HOH A 72 1372 2641 HOH HOH . PA 9 HOH A 73 1373 2530 HOH HOH . PA 9 HOH A 74 1374 2567 HOH HOH . PA 9 HOH A 75 1375 2531 HOH HOH . PA 9 HOH A 76 1376 2544 HOH HOH . PA 9 HOH A 77 1377 2484 HOH HOH . PA 9 HOH A 78 1378 2542 HOH HOH . PA 9 HOH A 79 1379 2511 HOH HOH . PA 9 HOH A 80 1380 36 HOH HOH . PA 9 HOH A 81 1381 38 HOH HOH . PA 9 HOH A 82 1382 2517 HOH HOH . PA 9 HOH A 83 1383 2487 HOH HOH . PA 9 HOH A 84 1384 2601 HOH HOH . PA 9 HOH A 85 1385 21 HOH HOH . PA 9 HOH A 86 1386 23 HOH HOH . PA 9 HOH A 87 1387 2472 HOH HOH . PA 9 HOH A 88 1388 2500 HOH HOH . PA 9 HOH A 89 1389 2543 HOH HOH . PA 9 HOH A 90 1390 2553 HOH HOH . PA 9 HOH A 91 1391 2573 HOH HOH . PA 9 HOH A 92 1392 2525 HOH HOH . PA 9 HOH A 93 1393 12 HOH HOH . PA 9 HOH A 94 1394 2496 HOH HOH . PA 9 HOH A 95 1395 2572 HOH HOH . PA 9 HOH A 96 1396 2537 HOH HOH . PA 9 HOH A 97 1397 2564 HOH HOH . PA 9 HOH A 98 1398 2562 HOH HOH . PA 9 HOH A 99 1399 14 HOH HOH . PA 9 HOH A 100 1400 24 HOH HOH . PA 9 HOH A 101 1401 2563 HOH HOH . PA 9 HOH A 102 1402 2536 HOH HOH . PA 9 HOH A 103 1403 2468 HOH HOH . PA 9 HOH A 104 1404 2623 HOH HOH . PA 9 HOH A 105 1405 2570 HOH HOH . PA 9 HOH A 106 1406 2565 HOH HOH . PA 9 HOH A 107 1407 2491 HOH HOH . PA 9 HOH A 108 1408 2533 HOH HOH . PA 9 HOH A 109 1409 2554 HOH HOH . PA 9 HOH A 110 1410 11 HOH HOH . PA 9 HOH A 111 1411 2566 HOH HOH . PA 9 HOH A 112 1412 2670 HOH HOH . PA 9 HOH A 113 1413 2476 HOH HOH . PA 9 HOH A 114 1414 2497 HOH HOH . PA 9 HOH A 115 1415 16 HOH HOH . PA 9 HOH A 116 1416 2556 HOH HOH . PA 9 HOH A 117 1417 2574 HOH HOH . PA 9 HOH A 118 1418 2509 HOH HOH . PA 9 HOH A 119 1419 2490 HOH HOH . PA 9 HOH A 120 1420 2644 HOH HOH . PA 9 HOH A 121 1421 20 HOH HOH . PA 9 HOH A 122 1422 2577 HOH HOH . PA 9 HOH A 123 1423 13 HOH HOH . PA 9 HOH A 124 1424 2646 HOH HOH . PA 9 HOH A 125 1425 2649 HOH HOH . PA 9 HOH A 126 1426 2559 HOH HOH . PA 9 HOH A 127 1427 2643 HOH HOH . PA 9 HOH A 128 1428 2469 HOH HOH . PA 9 HOH A 129 1429 2482 HOH HOH . PA 9 HOH A 130 1430 9 HOH HOH . PA 9 HOH A 131 1431 2560 HOH HOH . PA 9 HOH A 132 1432 2669 HOH HOH . PA 9 HOH A 133 1433 2546 HOH HOH . PA 9 HOH A 134 1434 2671 HOH HOH . PA 9 HOH A 135 1435 2495 HOH HOH . PA 9 HOH A 136 1436 2578 HOH HOH . PA 9 HOH A 137 1437 2534 HOH HOH . PA 9 HOH A 138 1438 2499 HOH HOH . PA 9 HOH A 139 1439 8 HOH HOH . PA 9 HOH A 140 1440 4 HOH HOH . PA 9 HOH A 141 1441 2492 HOH HOH . PA 9 HOH A 142 1442 2665 HOH HOH . PA 9 HOH A 143 1443 31 HOH HOH . PA 9 HOH A 144 1444 25 HOH HOH . PA 9 HOH A 145 1445 19 HOH HOH . PA 9 HOH A 146 1446 26 HOH HOH . PA 9 HOH A 147 1447 2467 HOH HOH . PA 9 HOH A 148 1448 2463 HOH HOH . PA 9 HOH A 149 1449 2465 HOH HOH . PA 9 HOH A 150 1450 2633 HOH HOH . PA 9 HOH A 151 1451 2569 HOH HOH . PA 9 HOH A 152 1452 2579 HOH HOH . PA 9 HOH A 153 1453 2522 HOH HOH . PA 9 HOH A 154 1454 3 HOH HOH . PA 9 HOH A 155 1455 2663 HOH HOH . PA 9 HOH A 156 1456 2668 HOH HOH . PA 9 HOH A 157 1457 2475 HOH HOH . PA 9 HOH A 158 1458 2645 HOH HOH . PA 9 HOH A 159 1459 2672 HOH HOH . PA 9 HOH A 160 1460 2627 HOH HOH . PA 9 HOH A 161 1461 2529 HOH HOH . PA 9 HOH A 162 1462 2652 HOH HOH . PA 9 HOH A 163 1463 7 HOH HOH . PA 9 HOH A 164 1464 34 HOH HOH . PA 9 HOH A 165 1465 2471 HOH HOH . PA 9 HOH A 166 1466 2675 HOH HOH . PA 9 HOH A 167 1467 2461 HOH HOH . PA 9 HOH A 168 1468 2551 HOH HOH . PA 9 HOH A 169 1469 2528 HOH HOH . PA 9 HOH A 170 1470 2673 HOH HOH . PA 9 HOH A 171 1471 2538 HOH HOH . PA 9 HOH A 172 1472 2470 HOH HOH . PA 9 HOH A 173 1473 2523 HOH HOH . PA 9 HOH A 174 1474 2464 HOH HOH . PA 9 HOH A 175 1475 33 HOH HOH . PA 9 HOH A 176 1476 2639 HOH HOH . PA 9 HOH A 177 1477 2677 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol NA _atom_site.label_atom_id NA _atom_site.label_comp_id NA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 4 _atom_site.Cartn_x -23.348 _atom_site.Cartn_y -8.455 _atom_site.Cartn_z 16.656 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 27.01 _atom_site.pdbx_formal_charge 1 _atom_site.auth_atom_id NA _atom_site.auth_comp_id NA _atom_site.auth_seq_id 1203 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 287 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #