data_8CV4
#
_model_server_result.job_id            aatXboMscJv9zfhfPMMNkA 
_model_server_result.datetime_utc      '2024-11-24 12:15:28' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8cv4 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"K","auth_seq_id":102}' 
#
_entry.id    8CV4 
#
_exptl.entry_id    8CV4 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              16.023 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'AMINO GROUP' 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8CV4 
_cell.length_a            53.575 
_cell.length_b            65.855 
_cell.length_c            76.395 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8CV4 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    'P 2ac 2ab' 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA trimeric 3 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,D,E,H,I,J,K,L,O 1 1 
B,C,F,G,M,N 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 G N N 
? 4 I N N 
? 4 K N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 C C TRP 1 C TRP 1 1_555 C N ALY 2 C ALY 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? 
covale ? covale2 C N TRP 1 C TRP 1 1_555 F C ACE . C ACE 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? 
covale ? covale3 C C ALY 2 C ALY 2 1_555 C N TYR 3 C TYR 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? 
covale ? covale4 C C ARG 5 C ARG 5 1_555 C N ALY 6 C ALY 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
covale ? covale5 C C ALY 6 C ALY 6 1_555 C N TYR 7 C TYR 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? 
covale ? covale6 C SG CYS 12 C CYS 12 1_555 F CH3 ACE . C ACE 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.766 ? 
covale ? covale7 C C CYS 12 C CYS 12 1_555 G N NH2 . C NH2 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.43 ? 
covale ? covale8 D C TRP 1 D TRP 1 1_555 D N ALY 2 D ALY 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? 
covale ? covale9 D N TRP 1 D TRP 1 1_555 H C ACE . D ACE 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? 
covale ? covale10 D C ALY 2 D ALY 2 1_555 D N TYR 3 D TYR 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.34 ? 
covale ? covale11 D C ARG 5 D ARG 5 1_555 D N ALY 6 D ALY 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.318 ? 
covale ? covale12 D C ALY 6 D ALY 6 1_555 D N TYR 7 D TYR 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? 
covale ? covale13 D SG CYS 12 D CYS 12 1_555 H CH3 ACE . D ACE 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.768 ? 
covale ? covale14 D C CYS 12 D CYS 12 1_555 I N NH2 . D NH2 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.429 ? 
covale ? covale15 E C TRP 1 E TRP 1 1_555 E N ALY 2 E ALY 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? 
covale ? covale16 E N TRP 1 E TRP 1 1_555 J C ACE . E ACE 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? 
covale ? covale17 E C ALY 2 E ALY 2 1_555 E N TYR 3 E TYR 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? 
covale ? covale18 E C ARG 5 E ARG 5 1_555 E N ALY 6 E ALY 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? 
covale ? covale19 E C ALY 6 E ALY 6 1_555 E N TYR 7 E TYR 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
covale ? covale20 E SG CYS 12 E CYS 12 1_555 J CH3 ACE . E ACE 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.768 ? 
covale ? covale21 E C CYS 12 E CYS 12 1_555 K N NH2 . E NH2 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.431 ? 
#
_chem_comp.formula           'H2 N' 
_chem_comp.formula_weight    16.023 
_chem_comp.id                NH2 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'AMINO GROUP' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N HN1 NH2 sing 271 n n 
N HN2 NH2 sing 272 n n 
#
_atom_sites.entry_id                     8CV4 
_atom_sites.fract_transf_matrix[1][1]    0.018665 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.015185 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.01309 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
F 3 ACE C 1 101 0 ACE ACE . 
G 4 NH2 C 1 102 13 NH2 NH2 . 
H 3 ACE D 1 101 0 ACE ACE . 
I 4 NH2 D 1 102 13 NH2 NH2 . 
J 3 ACE E 1 101 0 ACE ACE . 
K 4 NH2 E 1 102 13 NH2 NH2 . 
L 5 HOH A 1 501 55 HOH HOH . 
L 5 HOH A 2 502 69 HOH HOH . 
L 5 HOH A 3 503 111 HOH HOH . 
L 5 HOH A 4 504 92 HOH HOH . 
L 5 HOH A 5 505 3 HOH HOH . 
L 5 HOH A 6 506 4 HOH HOH . 
L 5 HOH A 7 507 77 HOH HOH . 
L 5 HOH A 8 508 5 HOH HOH . 
L 5 HOH A 9 509 68 HOH HOH . 
L 5 HOH A 10 510 106 HOH HOH . 
L 5 HOH A 11 511 56 HOH HOH . 
L 5 HOH A 12 512 63 HOH HOH . 
L 5 HOH A 13 513 6 HOH HOH . 
L 5 HOH A 14 514 27 HOH HOH . 
L 5 HOH A 15 515 2 HOH HOH . 
L 5 HOH A 16 516 70 HOH HOH . 
L 5 HOH A 17 517 74 HOH HOH . 
L 5 HOH A 18 518 113 HOH HOH . 
L 5 HOH A 19 519 57 HOH HOH . 
L 5 HOH A 20 520 54 HOH HOH . 
L 5 HOH A 21 521 114 HOH HOH . 
L 5 HOH A 22 522 104 HOH HOH . 
L 5 HOH A 23 523 26 HOH HOH . 
L 5 HOH A 24 524 65 HOH HOH . 
L 5 HOH A 25 525 62 HOH HOH . 
L 5 HOH A 26 526 25 HOH HOH . 
L 5 HOH A 27 527 119 HOH HOH . 
L 5 HOH A 28 528 16 HOH HOH . 
L 5 HOH A 29 529 75 HOH HOH . 
L 5 HOH A 30 530 120 HOH HOH . 
L 5 HOH A 31 531 14 HOH HOH . 
L 5 HOH A 32 532 103 HOH HOH . 
L 5 HOH A 33 533 88 HOH HOH . 
L 5 HOH A 34 534 17 HOH HOH . 
L 5 HOH A 35 535 112 HOH HOH . 
L 5 HOH A 36 536 53 HOH HOH . 
L 5 HOH A 37 537 52 HOH HOH . 
L 5 HOH A 38 538 35 HOH HOH . 
L 5 HOH A 39 539 51 HOH HOH . 
L 5 HOH A 40 540 72 HOH HOH . 
L 5 HOH A 41 541 115 HOH HOH . 
L 5 HOH A 42 542 102 HOH HOH . 
L 5 HOH A 43 543 98 HOH HOH . 
L 5 HOH A 44 544 108 HOH HOH . 
L 5 HOH A 45 545 43 HOH HOH . 
L 5 HOH A 46 546 29 HOH HOH . 
L 5 HOH A 47 547 95 HOH HOH . 
L 5 HOH A 48 548 99 HOH HOH . 
L 5 HOH A 49 549 109 HOH HOH . 
M 5 HOH B 1 501 87 HOH HOH . 
M 5 HOH B 2 502 116 HOH HOH . 
M 5 HOH B 3 503 10 HOH HOH . 
M 5 HOH B 4 504 24 HOH HOH . 
M 5 HOH B 5 505 105 HOH HOH . 
M 5 HOH B 6 506 64 HOH HOH . 
M 5 HOH B 7 507 122 HOH HOH . 
M 5 HOH B 8 508 40 HOH HOH . 
M 5 HOH B 9 509 1 HOH HOH . 
M 5 HOH B 10 510 38 HOH HOH . 
M 5 HOH B 11 511 20 HOH HOH . 
M 5 HOH B 12 512 9 HOH HOH . 
M 5 HOH B 13 513 44 HOH HOH . 
M 5 HOH B 14 514 90 HOH HOH . 
M 5 HOH B 15 515 11 HOH HOH . 
M 5 HOH B 16 516 84 HOH HOH . 
M 5 HOH B 17 517 60 HOH HOH . 
M 5 HOH B 18 518 123 HOH HOH . 
M 5 HOH B 19 519 71 HOH HOH . 
M 5 HOH B 20 520 18 HOH HOH . 
M 5 HOH B 21 521 50 HOH HOH . 
M 5 HOH B 22 522 89 HOH HOH . 
M 5 HOH B 23 523 46 HOH HOH . 
M 5 HOH B 24 524 91 HOH HOH . 
M 5 HOH B 25 525 76 HOH HOH . 
M 5 HOH B 26 526 28 HOH HOH . 
M 5 HOH B 27 527 96 HOH HOH . 
M 5 HOH B 28 528 8 HOH HOH . 
M 5 HOH B 29 529 30 HOH HOH . 
M 5 HOH B 30 530 58 HOH HOH . 
M 5 HOH B 31 531 48 HOH HOH . 
M 5 HOH B 32 532 33 HOH HOH . 
M 5 HOH B 33 533 34 HOH HOH . 
M 5 HOH B 34 534 47 HOH HOH . 
M 5 HOH B 35 535 45 HOH HOH . 
M 5 HOH B 36 536 121 HOH HOH . 
M 5 HOH B 37 537 36 HOH HOH . 
M 5 HOH B 38 538 73 HOH HOH . 
M 5 HOH B 39 539 13 HOH HOH . 
M 5 HOH B 40 540 37 HOH HOH . 
M 5 HOH B 41 541 21 HOH HOH . 
M 5 HOH B 42 542 78 HOH HOH . 
M 5 HOH B 43 543 66 HOH HOH . 
M 5 HOH B 44 544 12 HOH HOH . 
M 5 HOH B 45 545 41 HOH HOH . 
M 5 HOH B 46 546 22 HOH HOH . 
M 5 HOH B 47 547 83 HOH HOH . 
M 5 HOH B 48 548 19 HOH HOH . 
M 5 HOH B 49 549 124 HOH HOH . 
M 5 HOH B 50 550 67 HOH HOH . 
M 5 HOH B 51 551 110 HOH HOH . 
N 5 HOH C 1 201 15 HOH HOH . 
N 5 HOH C 2 202 59 HOH HOH . 
N 5 HOH C 3 203 85 HOH HOH . 
N 5 HOH C 4 204 80 HOH HOH . 
N 5 HOH C 5 205 97 HOH HOH . 
N 5 HOH C 6 206 23 HOH HOH . 
N 5 HOH C 7 207 7 HOH HOH . 
N 5 HOH C 8 208 31 HOH HOH . 
N 5 HOH C 9 209 101 HOH HOH . 
O 5 HOH D 1 201 117 HOH HOH . 
O 5 HOH D 2 202 118 HOH HOH . 
O 5 HOH D 3 203 81 HOH HOH . 
O 5 HOH D 4 204 86 HOH HOH . 
O 5 HOH D 5 205 107 HOH HOH . 
O 5 HOH D 6 206 49 HOH HOH . 
O 5 HOH D 7 207 61 HOH HOH . 
O 5 HOH D 8 208 39 HOH HOH . 
O 5 HOH D 9 209 82 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           N 
_atom_site.label_atom_id         N 
_atom_site.label_comp_id         NH2 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         K 
_atom_site.label_entity_id       4 
_atom_site.Cartn_x               12.219 
_atom_site.Cartn_y               31.629 
_atom_site.Cartn_z               23.232 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        31.89 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          N 
_atom_site.auth_comp_id          NH2 
_atom_site.auth_seq_id           102 
_atom_site.auth_asym_id          E 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              14 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    9 
_model_server_stats.query_time_ms           289 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           1 
#