data_8CV6 # _model_server_result.job_id nPIGaIba305rpdwfmj7eaw _model_server_result.datetime_utc '2024-11-13 04:53:20' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8cv6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":101}' # _entry.id 8CV6 # _exptl.entry_id 8CV6 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 44.053 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ACETYL GROUP' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 100.606 _cell.angle_gamma 90 _cell.entry_id 8CV6 _cell.length_a 29.442 _cell.length_b 59.636 _cell.length_c 36.269 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8CV6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall 'P 2yb' _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 B N TRP 1 B TRP 1 1_555 C C ACE . B ACE 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale2 B C ARG 8 B ARG 8 1_555 B N ALY 9 B ALY 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale3 B C ALY 9 B ALY 9 1_555 B N TYR 10 B TYR 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.321 ? covale ? covale4 B C GLY 11 B GLY 11 1_555 B N ALY 12 B ALY 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale5 B C ALY 12 B ALY 12 1_555 B N ALY 13 B ALY 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale6 B C ALY 13 B ALY 13 1_555 B N LYS 14 B LYS 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale7 B SG CYS 17 B CYS 17 1_555 C CH3 ACE . B ACE 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.765 ? covale ? covale8 B C CYS 17 B CYS 17 1_555 D N NH2 . B NH2 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.425 ? # _chem_comp.formula 'C2 H4 O' _chem_comp.formula_weight 44.053 _chem_comp.id ACE _chem_comp.mon_nstd_flag . _chem_comp.name 'ACETYL GROUP' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C O ACE doub 1 n n C CH3 ACE sing 2 n n C H ACE sing 3 n n CH3 H1 ACE sing 4 n n CH3 H2 ACE sing 5 n n CH3 H3 ACE sing 6 n n # _atom_sites.entry_id 8CV6 _atom_sites.fract_transf_matrix[1][1] 0.033965 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.00636 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016768 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.028051 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 ACE B 1 101 0 ACE ACE . D 4 NH2 B 1 102 18 NH2 NH2 . E 5 HOH A 1 501 76 HOH HOH . E 5 HOH A 2 502 44 HOH HOH . E 5 HOH A 3 503 107 HOH HOH . E 5 HOH A 4 504 112 HOH HOH . E 5 HOH A 5 505 75 HOH HOH . E 5 HOH A 6 506 10 HOH HOH . E 5 HOH A 7 507 24 HOH HOH . E 5 HOH A 8 508 3 HOH HOH . E 5 HOH A 9 509 13 HOH HOH . E 5 HOH A 10 510 79 HOH HOH . E 5 HOH A 11 511 102 HOH HOH . E 5 HOH A 12 512 105 HOH HOH . E 5 HOH A 13 513 35 HOH HOH . E 5 HOH A 14 514 9 HOH HOH . E 5 HOH A 15 515 2 HOH HOH . E 5 HOH A 16 516 108 HOH HOH . E 5 HOH A 17 517 73 HOH HOH . E 5 HOH A 18 518 57 HOH HOH . E 5 HOH A 19 519 113 HOH HOH . E 5 HOH A 20 520 8 HOH HOH . E 5 HOH A 21 521 59 HOH HOH . E 5 HOH A 22 522 21 HOH HOH . E 5 HOH A 23 523 67 HOH HOH . E 5 HOH A 24 524 49 HOH HOH . E 5 HOH A 25 525 82 HOH HOH . E 5 HOH A 26 526 20 HOH HOH . E 5 HOH A 27 527 45 HOH HOH . E 5 HOH A 28 528 100 HOH HOH . E 5 HOH A 29 529 31 HOH HOH . E 5 HOH A 30 530 34 HOH HOH . E 5 HOH A 31 531 48 HOH HOH . E 5 HOH A 32 532 19 HOH HOH . E 5 HOH A 33 533 56 HOH HOH . E 5 HOH A 34 534 22 HOH HOH . E 5 HOH A 35 535 12 HOH HOH . E 5 HOH A 36 536 58 HOH HOH . E 5 HOH A 37 537 30 HOH HOH . E 5 HOH A 38 538 64 HOH HOH . E 5 HOH A 39 539 43 HOH HOH . E 5 HOH A 40 540 33 HOH HOH . E 5 HOH A 41 541 46 HOH HOH . E 5 HOH A 42 542 86 HOH HOH . E 5 HOH A 43 543 42 HOH HOH . E 5 HOH A 44 544 14 HOH HOH . E 5 HOH A 45 545 106 HOH HOH . E 5 HOH A 46 546 66 HOH HOH . E 5 HOH A 47 547 87 HOH HOH . E 5 HOH A 48 548 80 HOH HOH . E 5 HOH A 49 549 17 HOH HOH . E 5 HOH A 50 550 16 HOH HOH . E 5 HOH A 51 551 15 HOH HOH . E 5 HOH A 52 552 94 HOH HOH . E 5 HOH A 53 553 4 HOH HOH . E 5 HOH A 54 554 7 HOH HOH . E 5 HOH A 55 555 41 HOH HOH . E 5 HOH A 56 556 18 HOH HOH . E 5 HOH A 57 557 71 HOH HOH . E 5 HOH A 58 558 74 HOH HOH . E 5 HOH A 59 559 6 HOH HOH . E 5 HOH A 60 560 93 HOH HOH . E 5 HOH A 61 561 99 HOH HOH . E 5 HOH A 62 562 51 HOH HOH . E 5 HOH A 63 563 29 HOH HOH . E 5 HOH A 64 564 54 HOH HOH . E 5 HOH A 65 565 92 HOH HOH . E 5 HOH A 66 566 70 HOH HOH . E 5 HOH A 67 567 47 HOH HOH . E 5 HOH A 68 568 78 HOH HOH . E 5 HOH A 69 569 103 HOH HOH . E 5 HOH A 70 570 60 HOH HOH . E 5 HOH A 71 571 89 HOH HOH . E 5 HOH A 72 572 27 HOH HOH . E 5 HOH A 73 573 53 HOH HOH . E 5 HOH A 74 574 37 HOH HOH . E 5 HOH A 75 575 72 HOH HOH . E 5 HOH A 76 576 65 HOH HOH . E 5 HOH A 77 577 77 HOH HOH . E 5 HOH A 78 578 62 HOH HOH . E 5 HOH A 79 579 81 HOH HOH . E 5 HOH A 80 580 55 HOH HOH . E 5 HOH A 81 581 111 HOH HOH . E 5 HOH A 82 582 84 HOH HOH . E 5 HOH A 83 583 32 HOH HOH . E 5 HOH A 84 584 61 HOH HOH . E 5 HOH A 85 585 95 HOH HOH . E 5 HOH A 86 586 110 HOH HOH . E 5 HOH A 87 587 97 HOH HOH . F 5 HOH B 1 201 28 HOH HOH . F 5 HOH B 2 202 52 HOH HOH . F 5 HOH B 3 203 68 HOH HOH . F 5 HOH B 4 204 11 HOH HOH . F 5 HOH B 5 205 88 HOH HOH . F 5 HOH B 6 206 38 HOH HOH . F 5 HOH B 7 207 39 HOH HOH . F 5 HOH B 8 208 25 HOH HOH . F 5 HOH B 9 209 23 HOH HOH . F 5 HOH B 10 210 96 HOH HOH . F 5 HOH B 11 211 50 HOH HOH . F 5 HOH B 12 212 5 HOH HOH . F 5 HOH B 13 213 101 HOH HOH . F 5 HOH B 14 214 36 HOH HOH . F 5 HOH B 15 215 90 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C ACE . . . C 3 -1.173 10.377 1.202 1 13.35 ? C ACE 101 B 1 HETATM 2 O O ACE . . . C 3 -1.205 10.572 2.41 1 13.58 ? O ACE 101 B 1 HETATM 3 C CH3 ACE . . . C 3 -0.541 11.334 0.249 1 13.97 ? CH3 ACE 101 B 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 40 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 290 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 3 #