data_8CV6
#
_model_server_result.job_id            O-s0yX7Ccx0uecwU13r3Vg 
_model_server_result.datetime_utc      '2024-11-13 04:45:31' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8cv6 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":102}' 
#
_entry.id    8CV6 
#
_exptl.entry_id    8CV6 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              16.023 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'AMINO GROUP' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          100.606 
_cell.angle_gamma         90 
_cell.entry_id            8CV6 
_cell.length_a            29.442 
_cell.length_b            59.636 
_cell.length_c            36.269 
_cell.Z_PDB               2 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8CV6 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    'P 2yb' 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 B N TRP 1 B TRP 1 1_555 C C ACE . B ACE 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? 
covale ? covale2 B C ARG 8 B ARG 8 1_555 B N ALY 9 B ALY 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? 
covale ? covale3 B C ALY 9 B ALY 9 1_555 B N TYR 10 B TYR 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.321 ? 
covale ? covale4 B C GLY 11 B GLY 11 1_555 B N ALY 12 B ALY 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
covale ? covale5 B C ALY 12 B ALY 12 1_555 B N ALY 13 B ALY 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? 
covale ? covale6 B C ALY 13 B ALY 13 1_555 B N LYS 14 B LYS 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? 
covale ? covale7 B SG CYS 17 B CYS 17 1_555 C CH3 ACE . B ACE 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.765 ? 
covale ? covale8 B C CYS 17 B CYS 17 1_555 D N NH2 . B NH2 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.425 ? 
#
_chem_comp.formula           'H2 N' 
_chem_comp.formula_weight    16.023 
_chem_comp.id                NH2 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'AMINO GROUP' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N HN1 NH2 sing 271 n n 
N HN2 NH2 sing 272 n n 
#
_atom_sites.entry_id                     8CV6 
_atom_sites.fract_transf_matrix[1][1]    0.033965 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.00636 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.016768 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.028051 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 ACE B 1 101 0 ACE ACE . 
D 4 NH2 B 1 102 18 NH2 NH2 . 
E 5 HOH A 1 501 76 HOH HOH . 
E 5 HOH A 2 502 44 HOH HOH . 
E 5 HOH A 3 503 107 HOH HOH . 
E 5 HOH A 4 504 112 HOH HOH . 
E 5 HOH A 5 505 75 HOH HOH . 
E 5 HOH A 6 506 10 HOH HOH . 
E 5 HOH A 7 507 24 HOH HOH . 
E 5 HOH A 8 508 3 HOH HOH . 
E 5 HOH A 9 509 13 HOH HOH . 
E 5 HOH A 10 510 79 HOH HOH . 
E 5 HOH A 11 511 102 HOH HOH . 
E 5 HOH A 12 512 105 HOH HOH . 
E 5 HOH A 13 513 35 HOH HOH . 
E 5 HOH A 14 514 9 HOH HOH . 
E 5 HOH A 15 515 2 HOH HOH . 
E 5 HOH A 16 516 108 HOH HOH . 
E 5 HOH A 17 517 73 HOH HOH . 
E 5 HOH A 18 518 57 HOH HOH . 
E 5 HOH A 19 519 113 HOH HOH . 
E 5 HOH A 20 520 8 HOH HOH . 
E 5 HOH A 21 521 59 HOH HOH . 
E 5 HOH A 22 522 21 HOH HOH . 
E 5 HOH A 23 523 67 HOH HOH . 
E 5 HOH A 24 524 49 HOH HOH . 
E 5 HOH A 25 525 82 HOH HOH . 
E 5 HOH A 26 526 20 HOH HOH . 
E 5 HOH A 27 527 45 HOH HOH . 
E 5 HOH A 28 528 100 HOH HOH . 
E 5 HOH A 29 529 31 HOH HOH . 
E 5 HOH A 30 530 34 HOH HOH . 
E 5 HOH A 31 531 48 HOH HOH . 
E 5 HOH A 32 532 19 HOH HOH . 
E 5 HOH A 33 533 56 HOH HOH . 
E 5 HOH A 34 534 22 HOH HOH . 
E 5 HOH A 35 535 12 HOH HOH . 
E 5 HOH A 36 536 58 HOH HOH . 
E 5 HOH A 37 537 30 HOH HOH . 
E 5 HOH A 38 538 64 HOH HOH . 
E 5 HOH A 39 539 43 HOH HOH . 
E 5 HOH A 40 540 33 HOH HOH . 
E 5 HOH A 41 541 46 HOH HOH . 
E 5 HOH A 42 542 86 HOH HOH . 
E 5 HOH A 43 543 42 HOH HOH . 
E 5 HOH A 44 544 14 HOH HOH . 
E 5 HOH A 45 545 106 HOH HOH . 
E 5 HOH A 46 546 66 HOH HOH . 
E 5 HOH A 47 547 87 HOH HOH . 
E 5 HOH A 48 548 80 HOH HOH . 
E 5 HOH A 49 549 17 HOH HOH . 
E 5 HOH A 50 550 16 HOH HOH . 
E 5 HOH A 51 551 15 HOH HOH . 
E 5 HOH A 52 552 94 HOH HOH . 
E 5 HOH A 53 553 4 HOH HOH . 
E 5 HOH A 54 554 7 HOH HOH . 
E 5 HOH A 55 555 41 HOH HOH . 
E 5 HOH A 56 556 18 HOH HOH . 
E 5 HOH A 57 557 71 HOH HOH . 
E 5 HOH A 58 558 74 HOH HOH . 
E 5 HOH A 59 559 6 HOH HOH . 
E 5 HOH A 60 560 93 HOH HOH . 
E 5 HOH A 61 561 99 HOH HOH . 
E 5 HOH A 62 562 51 HOH HOH . 
E 5 HOH A 63 563 29 HOH HOH . 
E 5 HOH A 64 564 54 HOH HOH . 
E 5 HOH A 65 565 92 HOH HOH . 
E 5 HOH A 66 566 70 HOH HOH . 
E 5 HOH A 67 567 47 HOH HOH . 
E 5 HOH A 68 568 78 HOH HOH . 
E 5 HOH A 69 569 103 HOH HOH . 
E 5 HOH A 70 570 60 HOH HOH . 
E 5 HOH A 71 571 89 HOH HOH . 
E 5 HOH A 72 572 27 HOH HOH . 
E 5 HOH A 73 573 53 HOH HOH . 
E 5 HOH A 74 574 37 HOH HOH . 
E 5 HOH A 75 575 72 HOH HOH . 
E 5 HOH A 76 576 65 HOH HOH . 
E 5 HOH A 77 577 77 HOH HOH . 
E 5 HOH A 78 578 62 HOH HOH . 
E 5 HOH A 79 579 81 HOH HOH . 
E 5 HOH A 80 580 55 HOH HOH . 
E 5 HOH A 81 581 111 HOH HOH . 
E 5 HOH A 82 582 84 HOH HOH . 
E 5 HOH A 83 583 32 HOH HOH . 
E 5 HOH A 84 584 61 HOH HOH . 
E 5 HOH A 85 585 95 HOH HOH . 
E 5 HOH A 86 586 110 HOH HOH . 
E 5 HOH A 87 587 97 HOH HOH . 
F 5 HOH B 1 201 28 HOH HOH . 
F 5 HOH B 2 202 52 HOH HOH . 
F 5 HOH B 3 203 68 HOH HOH . 
F 5 HOH B 4 204 11 HOH HOH . 
F 5 HOH B 5 205 88 HOH HOH . 
F 5 HOH B 6 206 38 HOH HOH . 
F 5 HOH B 7 207 39 HOH HOH . 
F 5 HOH B 8 208 25 HOH HOH . 
F 5 HOH B 9 209 23 HOH HOH . 
F 5 HOH B 10 210 96 HOH HOH . 
F 5 HOH B 11 211 50 HOH HOH . 
F 5 HOH B 12 212 5 HOH HOH . 
F 5 HOH B 13 213 101 HOH HOH . 
F 5 HOH B 14 214 36 HOH HOH . 
F 5 HOH B 15 215 90 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           N 
_atom_site.label_atom_id         N 
_atom_site.label_comp_id         NH2 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         D 
_atom_site.label_entity_id       4 
_atom_site.Cartn_x               -0.19 
_atom_site.Cartn_y               10.365 
_atom_site.Cartn_z               -4.799 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        18.57 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          N 
_atom_site.auth_comp_id          NH2 
_atom_site.auth_seq_id           102 
_atom_site.auth_asym_id          B 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              22 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           235 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           1 
#