data_8CVS # _model_server_result.job_id QKVD-VqagJRGR6AiBNpzmw _model_server_result.datetime_utc '2024-11-05 00:38:36' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8cvs # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"JA","auth_seq_id":1901}' # _entry.id 8CVS # _exptl.entry_id 8CVS _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 660.035 _entity.id 17 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'INOSITOL HEXAKISPHOSPHATE' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details 29-meric _pdbx_struct_assembly.oligomeric_count 29 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 17 JA N N ? 17 KA N N # _chem_comp.formula 'C6 H18 O24 P6' _chem_comp.formula_weight 660.035 _chem_comp.id IHP _chem_comp.mon_nstd_flag . _chem_comp.name 'INOSITOL HEXAKISPHOSPHATE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'MYO-INOSITOL HEXAKISPHOSPHATE;INOSITOL 1,2,3,4,5,6-HEXAKISPHOSPHATE' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 IHP sing 150 n n C1 C6 IHP sing 151 n n C1 O11 IHP sing 152 n n C1 H1 IHP sing 153 n n C2 C3 IHP sing 154 n n C2 O12 IHP sing 155 n n C2 H2 IHP sing 156 n n C3 C4 IHP sing 157 n n C3 O13 IHP sing 158 n n C3 H3 IHP sing 159 n n C4 C5 IHP sing 160 n n C4 O14 IHP sing 161 n n C4 H4 IHP sing 162 n n C5 C6 IHP sing 163 n n C5 O15 IHP sing 164 n n C5 H5 IHP sing 165 n n C6 O16 IHP sing 166 n n C6 H6 IHP sing 167 n n O11 P1 IHP sing 168 n n P1 O21 IHP doub 169 n n P1 O31 IHP sing 170 n n P1 O41 IHP sing 171 n n O31 H31 IHP sing 172 n n O41 H41 IHP sing 173 n n O12 P2 IHP sing 174 n n P2 O22 IHP doub 175 n n P2 O32 IHP sing 176 n n P2 O42 IHP sing 177 n n O32 H32 IHP sing 178 n n O42 H42 IHP sing 179 n n O13 P3 IHP sing 180 n n P3 O23 IHP doub 181 n n P3 O33 IHP sing 182 n n P3 O43 IHP sing 183 n n O33 H33 IHP sing 184 n n O43 H43 IHP sing 185 n n O14 P4 IHP sing 186 n n P4 O24 IHP doub 187 n n P4 O34 IHP sing 188 n n P4 O44 IHP sing 189 n n O34 H34 IHP sing 190 n n O44 H44 IHP sing 191 n n O15 P5 IHP sing 192 n n P5 O25 IHP doub 193 n n P5 O35 IHP sing 194 n n P5 O45 IHP sing 195 n n O35 H35 IHP sing 196 n n O45 H45 IHP sing 197 n n O16 P6 IHP sing 198 n n P6 O26 IHP doub 199 n n P6 O36 IHP sing 200 n n P6 O46 IHP sing 201 n n O36 H36 IHP sing 202 n n O46 H46 IHP sing 203 n n # _atom_sites.entry_id 8CVS _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code DA 16 LDZ H 1 301 1 LDZ MGG . EA 16 LDZ K 1 301 1 LDZ MGG . FA 16 LDZ N 1 301 1 LDZ MGG . GA 16 LDZ V 1 301 1 LDZ MGG . HA 16 LDZ Y 1 301 1 LDZ MGG . IA 16 LDZ b 1 301 1 LDZ MGG . JA 17 IHP c 1 1901 1902 IHP IHP . KA 17 IHP c 1 1902 1903 IHP IHP . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 IHP . . . JA 17 144.611 186.305 65.912 1 168.34 ? C1 IHP 1901 c 1 HETATM 2 C C2 IHP . . . JA 17 143.877 187.419 66.657 1 168.34 ? C2 IHP 1901 c 1 HETATM 3 C C3 IHP . . . JA 17 143.948 187.371 68.174 1 168.34 ? C3 IHP 1901 c 1 HETATM 4 C C4 IHP . . . JA 17 145.397 187.388 68.64 1 168.34 ? C4 IHP 1901 c 1 HETATM 5 C C5 IHP . . . JA 17 146.372 186.463 67.878 1 168.34 ? C5 IHP 1901 c 1 HETATM 6 C C6 IHP . . . JA 17 145.921 185.815 66.545 1 168.34 ? C6 IHP 1901 c 1 HETATM 7 O O11 IHP . . . JA 17 143.731 185.214 65.638 1 168.34 ? O11 IHP 1901 c 1 HETATM 8 P P1 IHP . . . JA 17 143.229 184.998 64.123 1 168.34 ? P1 IHP 1901 c 1 HETATM 9 O O21 IHP . . . JA 17 141.808 185.498 64.109 1 168.34 ? O21 IHP 1901 c 1 HETATM 10 O O31 IHP . . . JA 17 143.347 183.514 63.891 1 168.34 ? O31 IHP 1901 c 1 HETATM 11 O O41 IHP . . . JA 17 144.192 185.835 63.321 1 168.34 ? O41 IHP 1901 c 1 HETATM 12 O O12 IHP . . . JA 17 142.512 187.402 66.267 1 168.34 ? O12 IHP 1901 c 1 HETATM 13 P P2 IHP . . . JA 17 141.887 188.691 65.549 1 168.34 ? P2 IHP 1901 c 1 HETATM 14 O O22 IHP . . . JA 17 142.362 188.612 64.122 1 168.34 ? O22 IHP 1901 c 1 HETATM 15 O O32 IHP . . . JA 17 140.405 188.501 65.73 1 168.34 ? O32 IHP 1901 c 1 HETATM 16 O O42 IHP . . . JA 17 142.488 189.813 66.339 1 168.34 ? O42 IHP 1901 c 1 HETATM 17 O O13 IHP . . . JA 17 143.189 186.301 68.72 1 168.34 ? O13 IHP 1901 c 1 HETATM 18 P P3 IHP . . . JA 17 142.048 186.675 69.787 1 168.34 ? P3 IHP 1901 c 1 HETATM 19 O O23 IHP . . . JA 17 141.989 188.181 69.739 1 168.34 ? O23 IHP 1901 c 1 HETATM 20 O O33 IHP . . . JA 17 140.813 185.994 69.267 1 168.34 ? O33 IHP 1901 c 1 HETATM 21 O O43 IHP . . . JA 17 142.577 186.1 71.078 1 168.34 ? O43 IHP 1901 c 1 HETATM 22 O O14 IHP . . . JA 17 145.44 187.173 70.047 1 168.34 ? O14 IHP 1901 c 1 HETATM 23 P P4 IHP . . . JA 17 145.978 188.353 70.986 1 168.34 ? P4 IHP 1901 c 1 HETATM 24 O O24 IHP . . . JA 17 144.796 189.277 71.061 1 168.34 ? O24 IHP 1901 c 1 HETATM 25 O O34 IHP . . . JA 17 146.324 187.691 72.294 1 168.34 ? O34 IHP 1901 c 1 HETATM 26 O O44 IHP . . . JA 17 147.149 188.885 70.208 1 168.34 ? O44 IHP 1901 c 1 HETATM 27 O O15 IHP . . . JA 17 147.125 185.545 68.707 1 168.34 ? O15 IHP 1901 c 1 HETATM 28 P P5 IHP . . . JA 17 146.708 184.389 69.755 1 168.34 ? P5 IHP 1901 c 1 HETATM 29 O O25 IHP . . . JA 17 145.219 184.189 69.622 1 168.34 ? O25 IHP 1901 c 1 HETATM 30 O O35 IHP . . . JA 17 147.526 183.211 69.298 1 168.34 ? O35 IHP 1901 c 1 HETATM 31 O O45 IHP . . . JA 17 147.167 184.934 71.082 1 168.34 ? O45 IHP 1901 c 1 HETATM 32 O O16 IHP . . . JA 17 145.914 184.389 66.613 1 168.34 ? O16 IHP 1901 c 1 HETATM 33 P P6 IHP . . . JA 17 146.95 183.534 65.723 1 168.34 ? P6 IHP 1901 c 1 HETATM 34 O O26 IHP . . . JA 17 148.217 184.345 65.731 1 168.34 ? O26 IHP 1901 c 1 HETATM 35 O O36 IHP . . . JA 17 147.042 182.216 66.45 1 168.34 ? O36 IHP 1901 c 1 HETATM 36 O O46 IHP . . . JA 17 146.308 183.444 64.366 1 168.34 ? O46 IHP 1901 c 1 # _model_server_stats.io_time_ms 206 _model_server_stats.parse_time_ms 79 _model_server_stats.create_model_time_ms 65 _model_server_stats.query_time_ms 261 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 36 #